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UBC BIOC 303 DNA/RNA Enzymes
UBC BIOC 303 DNA/RNA Enzymes
78
Biology
Undergraduate 3
04/21/2008
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Term
Purine
 Definition
2 Rings nucleotide base
Term
Pyrimidine
 Definition
One ring nucleotide
Term
A
 Definition
Purine with NH2 Top
Term
G
 Definition
Purine with O top and NH2 bottom
Term
G Binds
 Definition
C Binds
Term
CG Hydrogen Bonds
 Definition
3 Bonds
Term
AT Bonds
 Definition
2 Bonds
Term
Pyrimidine with Met and O
 Definition
T
Term
Pyrimidine with O
 Definition
Uracil
Term
Pyrimidone with NH2
 Definition
C
Term
B Form DNA
 Definition
Right Handed DNA what form
Term
Type I Topoosomerase, Active site?
 Definition
Single Strand Cross, site is Tyr
Term
Type II Topoosomerase, Active site?
 Definition
Double Strand Cross, N--->C Gate
Term
Histone octamer
 Definition
Rotate DNA 2.5 Circle
Term
Histone H1
 Definition
Higher DNA structure
Term
Condensin
 Definition
(+) Solenoid makes 2
Term
DNA Polymerase core pocket handle O-
 Definition
Mg 2+, and ASP
Term
DNA Poly move direction
 Definition
5 ---> 3 Template
Term
DNA Poly I
 Definition
Repairing, Low pro, 5' -> 3' cutting
Term
DNA Poly II
 Definition
Normal DNA Poly Medium
Term
DNA Poly III
 Definition
Most Pro DNA Poly
Term
DnaB
 Definition
Open Up DNA
Term
DnaC  
 Definition
Origin Helper
Term
DnaA
 Definition
Origin Seeker
Term
Origin Sequences
 Definition
13 * 3 and 4 * 9 bp
Term
HU
 Definition
Stimulate Histone in Replication
Term
DnaG
 Definition
Priming with RNA
Term
SSB
 Definition
Stablize DNA during replication
Term
RNA Poly in Replication
 Definition
Priming DNA primer with RNA in replication
Term
Gyrase II
 Definition
Topoisomerase II release strain
Term
Dam methylase
 Definition
methylase new strand of DNA
Term
Ter
 Definition
Termination location on DNA for replication
Term
Topomerase IV
 Definition
seprate finished replicated product at TEr
Term
Telo Duplex Protein
 Definition
making of duplex ball at telomer to protect
Term
TRF1 and TRF2
 Definition
Making of Telomer ball for protection
Term
MutL and MutS
 Definition
Bind to mismatch
Term
Helicase II
 Definition
Mismatch helix opening
Term
Exo I
 Definition
 3-5 cutting
Term
Exo X
 Definition
3-5 cutting
Term
RecJ
 Definition
5-3 cutting
Term
Exo 1
 Definition
5-3 Cutting
Term
DNA Glycosylase
 Definition
Apurinise abnormal Base
Term
AP Endo
 Definition
Cutout apurinic site
Term
Poly I
 Definition
Repair Nick switch
Term
ABC Excinuclease
 Definition
create a X mer around lesion
Term
Photolayse
 Definition
Repaire Photoproduct or Butadimer
Term
O6 - Guan
 Definition
Abnormal form of G that pairs with T
Term
O6 Methylase
 Definition
Repaire O6 G Tautomers
Term
RecBCD
 Definition
Double strand cut digestion
Term
Chi
 Definition
DNA site to stop RecBCD 3' activity
Term
RecA
 Definition
Bind ssDNA and facilitate invasion and migeration
Term
Sigma Subunit RNA Poly
 Definition
Primer Determination
Term
Pol II
 Definition
RNA Transcription Enzyme
Term
TBP
 Definition
TATA Recognizer
Term
TBP/TFIID/TFIIA
 Definition
3 of them Bind to TATA and recruit TFIIB
Term
TFIIB
 Definition
Recruit TFIIF - Pol II
Term
TFIIF + Pol II
 Definition
Bind to Transcription site and recruit TFIIE
Term
TFIIE
 Definition
recruit TFIIH
Term
4 of them Stays at start of RNA transcription
 Definition
TFIID TFIIA TFIIB and TBP
Term
ELL
 Definition
Elongation involved with
Term
SII and SIII
 Definition
Elongation involved with
Term
PTEFb
 Definition
Elongation involved with
Term
Before Elongation Pol II undergoes
 Definition
When does Pol II undergo Phosphyrylation
Term
7 Methyl Guanosin
 Definition
5' - 5' linkage protect 5' End
Term
Phospohydrolase
 Definition
pppNp ' linkage to ppNp
Term
Guanyltransferase
 Definition
Add a GTP to ppNp to become GpppNp
Term
Guanne 7 methytransferase
 Definition
Add a AdoMet to GpppNp to make m7GpppNp
Term
2'-O-methyltransferase
 Definition
add an adoMet to m7GpppNp to m7GpppmNp
Term
poly adenylate polymerase
 Definition
RNA 3' AAAA maker
Term
HammerHead Ribozyme
 Definition
rNA cleaves itself
Term
rNA complementary
 Definition
Hairpin forming
Term
U1 pairs with
 Definition
GU at 5' pairs with
Term
U2 pairs with
 Definition
A in the middle pairs with
Term
U4 will leave A from to free B
 Definition
U6 and U5 what relation
Term
DNA Poly V
 Definition
Mutagenic Bypass of unrecognizable base
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