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Packet and 2nd powerpoint
58
Biology
9th Grade
03/30/2013

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Cards

Term
Where is DNA?
Definition
Nucleus
Term
Where does transcription take place?
Definition
Nucleus
Term
What (polymer) is synthesized during transcription?
Definition
mRNA
Term

What molecules make up mRNA?

Where are they found?

Definition

RNA Nucleotides

Floating in the nucleus

Term
What enzyme is required for transcription?
Definition
RNA Polymerase
Term
What is Base-Pair rule for DNA to RNA?
Definition

DNA-ACGT

RNA-UGCA

Term
What is the Base-Pair rule for 2 DNA strands?
Definition

ACGT

TGCA

Term
What synthesizes nucleic acids of DNA?
Definition
DNA Polymerase
Term
What synthesizes nucleic acids of RNA?
Definition
RNA Polymerase
Term
What is at the 5' end of DNA/RNA?
Definition
Phosphate Group
Term
What is at the 3' end of DNA and RNA?
Definition
Hydroxyl Group
Term
What way is DNA synthesized?
Definition
5' to 3' end
Term
How is DNA synthesized?
Definition
By adding nucleotides to its 3' end
Term
What is DNA?
Definition

Double-helix

Double stranded

Anit-Parallel

Term
Which strand of DNA contains the blueprint for the pre-mRNA?
Definition
Template (reading) strand
Term
Which direction is DNA read?
Definition
3' to 5' end
Term
Which direction is pre-mRNA molecule constructed?
Definition
5' to 3' prime end
Term
Why is transcription called it?
Definition
COPYING of DNA by mRNA
Term
What is a transcription factor?
Definition

Protein that binds to specific DNA sequences

Controls "flow"/transcription of genetic info from DNA to mRNA

Term
What signals the beginning of a gene?
Definition
RNA polymerase joins with several transcription factor proteins at promoter, which is a special sequencd of base pairs on the DNA template strand that signals the beginning of a gene
Term
What is the transcription initiation complex?
Definition

Transcription factor proteins and RNA polymerase

Moves along DNA template strand at 40 base pairs per second producing pre-mRNA

Term
What is a terminator sequence?
Definition

Base pairs on DNA template strand

When reached by RNA polymerase it completes production of pre-mRNA and releases it into the nucleoplasm

Term
Where does transcription initiation complex form on DNA?
Definition
Promoter sequence
Term
Would a cell transcribe all of its genes simultaneously?
Definition
No, each cell specialized for certain functions and will transcribe needed genes when they are needed
Term
Do all cells transcribe their genes at some point?
Definition
No, some stay off all the time (heart cell in skull)
Term
What is removed from pre-mRNA to make it mRNA?
Definition
Introns/Extrons and a start codon
Term

What was added to the mRNA that was not present in the pre-mRNA?

Where is it located?

Definition

Methyl cap - 5' end; helps molecule through nuclear pore and attach to ribosome...final destination

Poly-A tail - 3' end

Term
Where does mRNA leave the nucleus?
Definition
Nuclear pores
Term
What sequence of bases indicates starting point for polypeptide "blueprint"?
Definition
AUG-start codon
Term
Why is mRNA a messenger?
Definition

Travels through cytoplasm

Carries genetic info from DNA or ribosomes for protein synthesis

Term
Why are some poly-A tails longer than others?
Definition
If mRNA is longer, could be more easily degraded and so there needs to be a longer poly-A tail to prevent it
Term
What is the advantage of having the poly-A tail?
Definition

Promotes binding of mRNA to ribosomes and helps it export from nucleus

Protects mRNA from exonucleases

Term
What are introns?
Definition

Sections of pre-mRNA that are noncoding

Don't provide useful info for production of polypeptide being synthesized

When removed, certain DNA sections code for different polypeptides

Term
How does a human genome produce more polypeptides than genes it contains?
Definition
Introns removed, can code for different polypeptide sequences
Term
What are exons?
Definition
Portions of pre-mRNA remaining from introns
Term
What are the 4 steps of transcription?
Definition
  1. DNA Helicase unwinds DNA as hydrogen bonds break
  2. Free nucleotides of RNA pair w/ complimentary DNA bases
  3. RNA sugar-phosphate backbons forms by RNA polymerase
  4. Hydrogen bonds of DNA/RNA ladder break and new mRNA goes to the ribosomes in the cytoplasm through nuclear pores
Term
What type of biological molecule is an exonuclease?
Definition
Enzyme, removes nucleotides from either 3' or 5' end
Term
Where do free nucleotides in nucleus needed to produce mRNA strands come from?
Definition
They come from the exonuclease that detaches them from the stand
Term
How might biologists use transcription mechanisms to support the theory of evolution?
Definition

Universal genetic code

Everyone is related

Term
mRNA is ____ from the ____ code.  Then, the mRNA sequence is translated into a _____ sequence
Definition

transcribed

DNA

polypeptide

Term
What is the significance of a "triplet code"?
Definition

Language of mRNA

Each triplet of nucleotides codes for 1 codon/amino acid

Term
If mRNA has 300 nucleotices in coding region, how many amino acids would be in synthesized polypeptide?
Definition
100
Term
What is the Wobble Process and whose hypothesis was it?
Definition

If one sequence is damaged, there are other sequences to produce the same amino acid

Crick

Term

DNA-tac

mRNA-____

polypeptide sequence-____

Definition

Met

AUG(start codon)

Term
What amino acid is at the beginning of every polypeptide?
Definition

Methionine (Met)

Aug

Term
What are the 3 stages of translation?
Definition
Initiation (STARTS), Elongation (GROWS), Termination (STOP CODON)
Term
Where does the mRNA attach to when it leaves the nucleus
Definition
Ribosomes
Term
What is the significance of AUG
Definition

mRNA attaches to ribosome as sequence AUG

Starts process of translation

Term
How does the ribosome move as translation occurs?
Definition

Moves down the mRNA strand

Translocation 

Term
What makes up the ribosome and what are its 2 subunits?
Definition

rRNA and proteins

Smaller-binds to mRNA strand(several at 1 time)-many polypeptide chains synthesized at once

Larger-holds tRNA molecules in place while the covalent peptide bond is formed between the amino acids

Term
What are tRNA molecules in a cell and what do they contain?
Definition

Short sequences of nucleotides(80)

Anticodon and carry a specific amino acid

Term
Why is tRNA called transfer?
Definition
It transfers the amino acids from the nucleus to the ribosomes
Term
How many tRNAs are held in ribosomes at same time during elongation?
Definition
2
Term
What happens to unattached tRNA after its delivered amino acid?
Definition
Returns to nucleus to get more genetic material (amino acids)
Term
What occurs during translation?
Definition

1. Release factor stops elongation

2. amino acid attaches to water molecule

Term
What does translation do?
Definition
Copies a message from nucleus(genetic info)
Term
How many permutations are possible when 3 bases are used?
Definition
64=4^3
Term
Why can translation not occur while transcription occurs in eukaryotic cells?
Definition

1. Needs to wait for instructions from the nucleus

2. tRNA needs to supply amino acids

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