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Test 1
Modern Genetic Analysis Chapters 1-5
82
Biology
Undergraduate 3
01/25/2014

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Term
What are the 3 properties of DNA?
Definition
1. Replicated faithfully
2. Store and transmit information
3. Mutates/evolves
Term
Nucleotides differ by the structure of their...
Definition
nitrogenous bases
Term
Purines have _ rings in their nitrogenous bases.
Definition
2
Term
Pyrimadines have _ rings in their nitrogenous bases.
Definition
1
Term
Guanine and cytosine are held together with _ hydrogen bonds.
Definition
3
Term
Adenine and thymine are held together with _ hydrogen bonds.
Definition
2
Term
_ genes contain introns, which are _ regions of DNA.
Definition
Eukaryotic, non-coding
Term
The backbone of DNA consists of alternating _ and _ groups held together by _ bonds.
Definition
deoxyribose (sugar), phosphate, phosphodiester
Term
The 3' end of a DNA chain contains a _, while the 5' end contains a _.
Definition
hydroxyl group, phosphate
Term
_% of the human genome is composed of exons.
Definition
2
Term
A genome is...
Definition
the totality of DNA in an organism.
Term
The operational region of a genome is a _.
Definition
gene
Term
Genome size is proportional to ___.
Definition
the number of genes
Term
Non-essential DNA-elements in bacterial cells that contain few, tightly-packed genes are called _.
Definition
plasmids
Term
Mitochondria and chloroplasts contain an organelle-specific DNA molecule called an __.
Definition
organellar chromosome/genome
Term
Name the 4 pieces of evidence for endosymbiotic theory.
Definition
1. Plastids & mitochondria produce by binary fission
2. circular genomes
3. phylogenetic evidence for prokaryotic ancestry
4. membrane structures indicative of phagocytosis
Term
Viral genomes have _-stranded DNA or RNA
Definition
double or single
Term
Viral genes are _ together.
Definition
close together
Term
Prokaryotic genes have a _ _ chromosome with _ packed genes.
Definition
single circular, densely
Term
Many prokaryotic genes are arranged in operons, which are _.
Definition
a group of genes transcribed together due to interacting functions.
Term
2 chromosomal copies in a diploid organism are _.
Definition
homologs
Term
The region of a chromosome where spindle fibers attach is the _.
Definition
centromere
Term
Ribosomal RNA is transcribed and ribosomes are constructed in the _.
Definition
nucleolus
Term
NORs are landmarks for _ _.
Definition
cytogenetic analysis
Term
Polytene chromosomes are _ chromosomes commonly found in _.
Definition
giant, Drosophila
Term
Chromatin compacts based on _ _.
Definition
salt concentration
Term
When salt concentrations are high, a nucleosome coils to form a _.
Definition
solenoid
Term
How does the ribose sugar differ from deoxyribose?
Definition
Ribose has an extra hydroxy group
Term
How does uracil differ from thymine?
Definition
Uracil does not have a methyl group
Term
Informational RNA consists of _.
Definition
mRNA
Term
The types of functional RNA are _ and _.
Definition
tRNA, rRNA
Term
What is the function of tRNA?
Definition
To bring amino acids to ribosomes during translation
Term
What is the function of rRNA?
Definition
Structural component of ribosomes
Term
The sequence that is reported in scientific literature for a gene is the __.
Definition
nontemplate strand
Term
In transcription, RNA polymerase elongates the RNA in the _-_ direction, thus the template is oriented in the _-_ direction.
Definition
5'-3', 3'-5'
Term
Decribe transcription initiation in prokaryotes.
Definition
RNA pol binds to DNA at promoter sequence, unwinds double helix and begins synthesis of an RNA molecule.
Term
Describe transcription initiation in eukaryotes.
Definition
Transcription factor binds to the promoter, then RNA pol II binds to the protein-DNA complex
Term
During elongation, _ adds _ to the 3' end.
Definition
RNA Pol, ribonucleotides
Term
In transcription termination, the hair-pin structure is composed of...
Definition
a GC sequence followed by a string of U's
Term
In transcription termination, the endonucleus is signalled by what sequence?
Definition
AAUAAA
Term
In transcription termination, poly(A) polymerase adds the _ to the site of cleavage at the 3' end.
Definition
poly(A) tail
Term
What is splicing?
Definition
removing introns in Pre-mRNA and connecting exons
Term
The 5' splice site contains a GU sequence, while the 3' splice site contains a _ sequence.
Definition
AG
Term
A spliceosome consists of
Definition
snRNP's (small nuclear ribonucleoprotein particles) and snRNA
Term
sRNA bonds to introns via
Definition
base pair hydrogen bonds
Term
The process that builds the primary structure of a protein using information encoded in mRNA is...
Definition
translation
Term
How many nucleotides make up a codon?
Definition
3
Term
A codon consists of how many base pairs?
Definition
3
Term
Each codon has an associated _.
Definition
tRNA
Term
An amino acid is coded for by a _.
Definition
codon
Term
An amino acid is accepted at the _ end of tRNA.
Definition
3'
Term
Amino acids are attached to tRNA's by enzymes called _.
Definition
aminoacyl-tRNA synthetases
Term
Wobble takes place at the _ end of the codon and _ end of the anticodon and allows___.
Definition
3', 5', loose base pairing
Term
Define isoaccepting tRNAs.
Definition
tRNAs that accept the same amino acid but are transcribed from different tRNA genes
Term
The recognition of the 1st codon and the placement of the first amino acid in translation is _.
Definition
Initiation
Term
The first amino acid in any newly synthesized polypeptide is _.
Definition
AUG
Term
In bacteria, initiation codons are preceded by ___ that binds with 16s rRNA.
Definition
Shine-Dalgarno sequences
Term
Describe initiation in eukaryotes.
Definition
A ribosome attaches to the mRNA at the 5' cap and moves along the RNA. At the first AUG codon encountered, an initiator tRNA carrying AUG is inserted.
Term
Polypeptide bond formation is catalyzed by _.
Definition
23S (a ribozyme)
Term
When the polypeptide is in the A site...
Definition
the 2 tRNAs and their codons move, leaving an empty A site for a new charged tRNA
Term
In translation termination, a __ recognizes a stop codon that releases the polypeptide and causes the ribosome to dissociate.
Definition
release factor
Term
Enzyme structure remains unchanged in the _ model of active sites.
Definition
lock & key
Term
Enzyme structure is molded by the substrate in the _ model.
Definition
induced fit
Term
Define biochemical pathways.
Definition
series of reactions mediated by enzymes
Term
What does a codon deletion result in?
Definition
Reading frame shift and premature stop codon
Term
An amino acid very commonly mutated is _.
Definition
Phenylalanine hydroxylase
Term
For a recessive disease to develop...
Definition
both copies of a gene must be defective
Term
A _ phenotype will be expressed when there is only one copy.
Definition
dominant
Term
A single allele that provides enough protein for functionality is _.
Definition
haplo-sufficient
Term
A single allele that does not provide enough protein for normal function is _.
Definition
haplo-insufficient
Term
What is the semi-conservative method of DNA replication?
Definition
Two daughter DNA double strands each consist of one parent strand and one newly synthesized strand.
Term
The semi-conservative method of DNA replication was tested and supported by the _ experiment.
Definition
Meselson-stahl
Term
The lagging strand of DNA is synthesized into _ fragments which are joined by _.
Definition
okizaki, DNA ligase
Term
The enzyme that catalyzes the 3' nucleotide addition at the replication fork is __.
Definition
DNA polymerase III
Term
_ are needed to add nucleotides to an existing nucleotide strand.
Definition
polymerases
Term
At the beginning of the leading strand and each okizaki fragment of the lagging strand, short stretches of _ are synthesized to act as _.
Definition
RNA, primers
Term
What is the function of the enzyme helicase?
Definition
Breaking hydrogen bonds between bases and unwinding DNA strands
Term
What is the function of the enzyme topoisomerase?
Definition
As DNA is unwound, it becomes supercoiled. Topoisomerase relaxes the strands.
Term
What enzyme prevents the shortening of a chromosome and how does it do this?
Definition
telomerase, adds noncoding DNA
Term
Describe prokaryote cell division.
Definition
Binary fission: DNA replication and separation occur before cell division; a motor system separates chromosomes
Term
The asexual production of cells maintaining ploidy is _.
Definition
mitosis
Term
Gamete production resulting in ploidy reduction is called _.
Definition
meiosis
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