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Recombinant DNA methods
Nerds
25
Medical
Professional
09/09/2011

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Term
What has the largest amount of DNA that can be cloned into vectors?
Definition
YAC (yeast artificial chromosome) 1000 kb
Term
What has the least amount of DNA that can be cloned in vectors?
Definition
Plasmid 20 kb
Term
What are the most commonly used vectors?
Definition
Plasmids
Term
What type of order is this in terms of DNA carrying ability?
Plasmid, bcateriophage, cosmid, P1 vector, YAC
Definition
smallest to LARGEST
Term
What commonly cloning vector is found in ecoR1 has antibiotic res. genes. and indep origin of rep (rep on its own)
Definition
pBR322
Term
What are three things that Yeast Artificial Chromosome needs?
Definition
Telomere, centromere, and ARS (allows for indep DNA rep)
ARS stands for autonomous replication sequence
Term
To test if host has recombinant DNA put in a media with antibiotic and then...
Definition
if it is the only thing that grows then it worked!
Term
Introduction of target into plasmid will change the characteristic of plasmid this is called?
Definition
Insertional Inactivation
(results in huge frameshift mutation whatever gene the foreign DNA is on no longer works
Term
To make certain we could find a clone to make production of a protein we would use a?
Definition
cDNA library
Term
what library is used to study promoter sequence?
Definition
Genomic library (promoter sequence would NOT BE EXPRESSED in the cDNA)
Term
What test can be used for
a. DNA finger printing (RFLP)
b. Genetic counseling, ex. Cystic fibrosis
c. DNA mapping
d. Sequence homology
Definition
Southern blotting
Term
What test involves a transfer of DNA from a gel to a solid matrix. Gives info about presence or absence of a particular gene (DNA). Gives NO info whether the genes are expressed or not in a given tissue.
Definition
Southern Blot
Term
What test involves transfer of RNA from a gel to a solid matrix and gives info about whether RNAs are present in a tissue. Often used to determine whether particular genes are expressed. Does NOT give info about whether the gene is present in other tissue.
Definition
Northern Blotting
Term
What type of test involves transfer of proteins from gel to solid matrix and gives info about expression of a given protein. LABELED ANTIBODIES are used as probes.
Definition
Western blotting
Term
If you wanted to find ribosomal DNA genes you would use...
Definition
gDNA you're right! good job!
Term
If you want to find a functional protein you would use?
Definition
cDNA
good kicks!
Term
When you use total DNA this is called a?
Definition
gDNA library
Term
To see if sequence is there the following tests use what?
Southern Blot
Western Blot
Northern Blot
Definition
Southern blot - DNA
Western blot - Protein
Northern Blot - RNA
Term
Northern and southern blotting use?
Definition
Labeled NA probes
Term
PCR is 3 stages resulting in a million base pairs of your gene of interest. What are the three steps?
Definition
1.Denature the double strand
2. Lower temp to anneal; allow base pairing
(add Taq polymerase and dNTPs, incubuate at 72 degrees C)
3. Raise temp to extend the primers
Term
Sickle Cell gene is missing a cleavage site resulting in a...
Definition
longer strand
Term
Restriction endonucleases are ? specific.
Definition
sequence
Term
Humans differ amonst each other in regards to their ?. This allows for CSI to pick right suspect even based on one hair. Also used in paternity testing
Definition
VNTR (variable nucleotide tandem repeats)
Term
What test can be used for breast cancer screening, prostate screening, and also result in genetic discrimination?
Definition
Micro Array
Term
What can turn genes off by specifically binding to mRNA.
Use against over expressed gene in cancer cells
Definition
siRNA
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