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Quantification methods
Micro lab exam
20
Biology
Undergraduate 4
10/11/2011

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Cards

Term
What kind of slide do we use for direct count?
Definition
Hemocytometer
Term
What kind of dye did we use for direct count?
Definition
Methylene blue
Term
What are the two reasons why we use direct count?
Definition

1. To quantify # of bacteria/ bacteria [conc.]

 

2. To count blood cells

Term
What is the equation for the cell concentration?
Definition

[cells]= average # of cells x 2 =

4x10-6ml

Term
Where did the 2 come from in the cell concentration equation?
Definition

The D.F. of


100ul bacteria

100ul bacteria + 100ul methylene blue

= 1/200= 1/2= "2"

Term
Whatr are the four methods to quantification?
Definition
  1. Direct count
  2. Plate count
  3. Filtration
  4. Turbidimetry
Term
What is the labeled axis of the turbidity graph?
Definition
Optical density [y] vs. Bacteria ml [x]
Term
What are the limitations of quantification method?
Definition
  1. Cannot distinguish live vs. Dead cells
  2. Generlizing a STD curve
  3. Must dilute bacteria [conc] if it is too high
Term
Turbidity graph and g time equation
Definition

Bacteria/ Time

 

Gtime= Tf -Ti

                      3.3 log (nf)

                                   ni

Term
What does Live/dead stain?
Definition
Stain for bacterial viability
Term
Fluorescene
Definition
When light wave strike a fluorescence molecule the atom becomes excited and it moves to an unstable energy state. The atom will fall back to its normal energy state while releasing a light energy photon
Term
What are the two types of dyes used on Live/Dead?
Definition

1. STYO9 green nucleic acid stain

2. Propidum Iodide red fluorecent nucleic acid stain

Term
STYO9 stains?
Definition
Stains all living cells and dead cells
Term
Propidum iodide stains?
Definition
Stains cell with damaged membranes
Term
What are the limitations with STYO9 and propidum iodide dyes?
Definition
  1. Dead cells with intact membrane will stain Green.
  2. Live cells with damage membrane will stain Red
Term
What are the limitations of Direct count?
Definition
Cannot distinguish live vs. Dead cells 
Term
For Turbidity what machine do we use to measure?
Definition
The spectometer to measure the cell [conc] of the OD (Optical density)
Term
how does a spectrophotometer work?
Definition
measure how much light pass through it
Term
what are the advantages and disadvantages of turbidimetry and filtration?
Definition

- can count the concentrated samples

 

disadvantage:

live and dead cells cannot be differentiated 

Term
what is fluorescent/ how does it work?
Definition
when light wave strike a fluorescence molecule the atom becomes excited and it moves to an unstable energy state. The atom will fall back to its normal energy state while releasing a light energy photon. 
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