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Phylogeny and Systematics
Chapter 25 Campbell Biology Seventh Edition
33
Biology
11th Grade
02/03/2011

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Term
Phylogeny
Definition
The evolutionary history of a species or group of species.
Term
Systematics
Definition
An analytical approach to understanding the diversity and relationships of organisms, both present-day and extinct.
Term
Molecular Systematics
Definition
A form of systematics that utilizes comparisons of DNA, RNA and other molecules to infer evolutionary relationships between individual genes or entire genomes.
Term
Fossil Record
Definition
A paleontological history derived from the sequence in which remnants have been deposited in sedimentary rock.
Term
Analogy
Definition
Similarity due to convergent evolution, rather than shared ancestry - such as the similarity in appearance of Australian burrowing moles, despite uncommon ancestry.
Term
Homoplasies
Definition
A term that describes analogous structures that have evolved independently. Can also be used to describe coincidental DNA similarities.
Term
Taxonomy
Definition
A branch of biology that deals with the naming and classification of organisms.
Term
Binomial
Definition
The two-word format for scientific naming. The first word is capitalized and the whole name is italicized. Example: "Panthera Pardus", the scientific name for the leopard.
Term
Genus (plural, "Genera")
Definition
The first part of a species' name. Species are a direct subset of this.
Term
Specific epithet
Definition
The second part of a species' scientific name. It is unique for each species in a genus.
Term
Species (classification)
Definition
The lowest level of classification in taxonomy.
Term
Species, Genus, Family, Order, Class, Phylum, Kingdom, Domain.
Definition
The order, in increasing scope, of classification of organisms.
Term
Phylogenetic Tree
Definition
A branching diagram that depicts a hypothesis about evolutionary relationships.
Term
Cladogram
Definition
A diagram that shows patterns of shared characteristics along a line.
Term
Clade
Definition
A branch of a phylogenetic tree that includes a common ancestor and all its descendants.
Term
Cladistics
Definition
The analysis of how species may be grouped into clades.
Term
Monophyletic grouping
Definition
A valid clade, that consists of the ancestral species and all its descendants.
Term
Paraphyletic grouping
Definition
An invalid clade, that consists of an ancestral species and some but not all of its descendants.
Term
Polyphyletic grouping
Definition
An invalid clade that consists of several species that lack a common ancestor. Such a situation calls for further reconstruction of a cladogram.
Term
Shared Primitive Character
Definition
A trait that is shared beyond the taxon that is being defined.
Term
Shared Derived Character
Definition
An evolutionary novelty unique to a particular clade.
Term
Outgroup
Definition
A species or group of species that is closely related to the ingroup.
Term
Ingroup
Definition
Various species under study in a cladogram. The species must be more closely related than those of the outgroup.
Term
Phylogram
Definition
A presentation of information about the sequence of events in an evolutionary history relative to one another.
Term
Ultrametric Tree
Definition
A chronological account of an evolutionary history which details specific dates of evolutionary divergence.
Term
Maximum Parsimony
Definition
A principle which dictates that the simplest explanation that is consistent with the facts should be investigated first. Also known as "Occam's Razor" because it shears away unnecessary complications.
Term
Maximum Likelihood
Definition
A principle which states that, given certain rules about how DNA changes over time, a tree can be found that reflects the most likely sequence of evolutionary events.
Term
Orthologous Genes
Definition
Homologous genes that are passed in a straight line from one generation to the next but have ended up in different gene pools because of speciation. An example is the Beta Hemoglobin genes in humans in mice.
Term
Paralogous Genes
Definition
Genes that result from gene duplication, and so are found in more than one copy in the same genome. An example is that of the olfactory receptor genes, which have duplicated in humans and mice to the point that more than 1,000 of them can be found in a genome.
Term
Molecular Clock
Definition
A yardstick for measuring the absolute time of evolutionary change based on the observation that some genes and other regions of genomes appear to evolve at constant rates.
Term
Neutral Theory
Definition
The theory that much evolutionary change in genes and proteins has no effect upon fitness and therefore is not influence by Darwinian selection. As a result of this, the theory is that the rate of molecular change should be regular like a clock.
Term
Bacteria, Archaea and Eukarya
Definition
The three domains of life according to the Universal Tree of Life.
Term
Horizontal Gene Transfer
Definition
A process in which genes are transferred from one genome to another through mechanisms such as transposable elements - small, mobile genetic elements that move about a genome - and perhaps through fusions of different organisms. Eukarya may have been produced from a fusion of a bacterium and an archaean.
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