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PDBIO 120 FOR THE FINAL
This is a review for the final
183
Physiology
Undergraduate 1
04/13/2011

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Term
What is a topoisomerase
Definition
are enzymes that unwind and wind DNA
Term
What is a primase
Definition
these are enzymes that catalyze the synthesis of a short RNA segment (primer) (No DNA poly, can initiate synthesis without an initial RNA or DNA primer)
Term
What is a ligase
Definition
is an enzyme that catalyzes the joining of two large molecules by chemical bonding.
Term
What is DNA poly I
Definition
-has a 5'->3' polymerase activity (requires a primer
-has a 3'->5' exonuclease activity (proofreading)
-has a 5'->3' exonuclease activity (mediating nick translation during DNA repair) removes the primer
Term
What is DNA poly III
Definition
-synthesizes the RNA/DNA primer
-synthesizes the leading strand
Term
What is a sigma protein
Definition
is a prokaryotic transcription initiation factor that enables specific binding of RNA poly
Term
What are basal transcription factors
Definition
these form the preinitiation complex, which with RNA poly II bind to and read single stranded DNA gene template.
Term
What is RNA polymerase
Definition
is an enzyme that produces RNA
Term
What is a reverse transcriptase
Definition
is a DNA poly enzyme that transcribes single stranded RNA into double stranded DNA.
Term
What is a ribozyme
Definition
Is a RNA molecule thats shape allows it to catalyze a chemical reaction.
Term
What is involved in replacing the RNA primer with dNTPs in an Okazaki fragment
Definition
D-DNA poly
Term
What catalyzes the formation of phospho-diester bonds between adjacent ribonucleotides during transcription.
Definition
H-RNA Poly
Term
Ribosomes
A. Read the template in the 3’→5’ direction, add amino acids to the peptide at the amino terminal
B. Read the template in the 3’→5’ direction, add amino acids to the peptide at the carboxy terminal
C. Read the template in the 5’→3’ direction, add amino acids to the peptide at the amino terminal
D. Read the template in the 5’→3’ direction, add amino acids to the peptide at the carboxy terminal
Definition
D-Read the template in the 5’→3’ direction, add amino acids to the peptide at the carboxy terminal
Term
When polymerization of a protein is complete, and α-helices or β-pleated sheets have formed, what is the highest level of structure that has been completed?
A. primary
B. secondary
C. tertiary
D. quaternary
Definition
B- secondary
Term
What type of interaction is NOT directly responsible for the formation of tertiary structure in proteins?
A. peptide bonds between adjacent amino acids
B. hydrogen bonds between side chains and sections of the polypeptide backbone
C. hydrogen bonds between side chains of different amino acids
D. covalent bonds between two sulphur-containing side chains
Definition
A-peptide bonds between adjacent amino acids
Term
What forms the “backbone” of a protein?
A. a chain of sugar and phosphate groups, linked through phosphodiester bonds
B. purine and pyrimidine pairs, hydrogen-bonded to each other
C. a chain of amino and carboxyl groups, linked via peptide bonds
D. a chain of sugar groups, linked through glycosidic bonds.
Definition
C. hydrogen bonds between side chains of different amino acids
Term
Which of the following includes all of the purines found in either RNA and DNA?
A. cytosine and uracil
B. cytosine and thymine
C. adenine and thymine
D. guanine and adenine
Definition
D. guanine and adenine
Term
What is responsible for holding the two strands together in the “stems” of RNA?
A. hydrophobic interactions
B. hydrogen bonds
C. ionic bonds
D. covalent bonds
E. phosphodiester bonds
Definition
B. hydrogen bonds
Term
Which of the following moves along its appropriate DNA or RNA template in the 3’→5’ direction?

A. DNA polymerase III
B. RNA polymerase
C. Ribosomes
D. A and B
E. A and C
F. B and C
G. A, B, and C
Definition
D. A and B
Term
Which of the following do starch and glycogen have in common?

A. the type of glycosidic linkage used
B. the size of their monosaccharide subunits
C. a storage function in animals
D. A and B
E. A and C
F. B and C
G. A, B, and C
Definition
D. A and B
Term
A cell has DNA with 15 nucleotides per strand of the double helix. The cell was induced to undergo transcription of its entire DNA. During transcription the cell was incubated in a solution containing deoxyribonucleotides that weigh 2 units (normal) each and ribonucleotides that weigh 3 units (due to other unusual isotopes) each.

11. What will be the weight value of each mRNA strand produced?

A. 15
B. 30
C. 45
D. 60
E. 90
Definition
C. 45
Term
The average molecular weight of a nucleotide in DNA is 310 g/mole. The average molecular weight of a nucleotide in RNA is 325 g/mole. The average weight of an amino acid is 120 g/mole.

12. Bacterial DNA (double stranded) was isolated and determined to have the molecular weight of 124,000 g/mole. What is the best estimate of the molecular weight of the mRNA that would result from transcription of this DNA?

A. 48,000 g/mole
B. 62,000 g/mole
C. 65,000 g/mole
D. 84,000 g/mole
E. 124,000 g/mole
F. 130,000 g/mole
Definition
C. 65,000 g/mole
Term
What is the best estimate of the molecular weight of the protein that would be produced through translation of the mRNA (assume the entire mRNA “codes” for the protein)?

A. 8,000 g/mole
B. 12,000 g/mole
C. 16,000 g/mole
D. 24,000 g/mole
E. 48,000 g/mole
Definition
A. 8,000 g/mole
Term
Transcription of the following bacterial gene would produce which of the following mRNA sequences?

5’  -35 box  -10 box   GATGTCTCTAGGTTTC 3’

A. 5’ GAUGUCUCUAGGUUUC 3’
B. 5’ GATGTCTCTAGGTTTC 3’
C. 5’ CUACUGUGUUCCUUUG 3’
D. 3’ GAUGUCUCUAGGUUUG 5’
E. 3’ GATGTCTCTAGGTTTG 5’
F. 3’ CUACUGUGU UCCUUUG 5’
Definition
A. 5’ GAUGUCUCUAGGUUUC 3’
Term
RNA polymerase and primase have which of the following in common?

A. Both can synthesize nucleic acids in the 5’→3’ direction
B. Both can polymerize deoxyribonucleotides
C. Both can synthesize nucleic acids starting from a single-stranded template.
D. A and B
E. B and C
F. A and C
E. A, B, and C
Definition
F. A and C
Term
This table gives the results of assays of percentages of bases from nucleic acids isolated from source 1. What type of nucleic acid (RNA or DNA) is most likely specified? State whether it is likely to be single or double stranded.
Source A G T C U
(1) 20 30 0 10 40

17. The nucleic acid from source #1 is _________ and most likely __________.
A. RNA; single stranded
B. RNA; double stranded
C. DNA; single stranded
D. DNA; double stranded
Definition
A. RNA; single stranded
Term
mRNA and rRNA have which of the following in common?

A. Both are translated into proteins
B. Both are involved in translation
C. Both contain uracil
D. A and B
E. B and C
F. A and C
G. A, B, and C
Definition
E. B and C
Term
Describe what DNA looks like
Definition
is a double helix form, that has the bases ATCG that complementary base pair with the other side
Term
Describe what RNA looks like
Definition
is a single chained strand of DNA with the T's being replaced by U's
Term
Describe what Protein looks like
Definition
are chains of amino acids bonded together by peptide bonds-> the genetic code determines what proteins are coded for, which determines the shape
Term
Describe what carbohydrates look like
Definition
Long chains of carbon and hydrogen
Term
Describe what fats look like
Definition
Glycerol head with chains of fatty acid- usually three chains
Term
An original DNA sequence and the peptide chain it codes for are shown below.

5’ TATTGGCTAGTACAT 3’
Tyr- Trp –Leu-Val- His

If a mutation in the DNA occurs that adds one base pair as shown below (underlined C added), what will the new peptide chain look like (use the codon map on page 4) following transcription and translation?

5’ TATTGGCCTAGTACAT 3’

A. Tyr – Trp – Leu – Val – His
B. Tyr – Trp – Pro – Ser - Thr
C. Tyr – Val – His – Ser - Phe
D. Tyr – Val - His
E. Tyr – Val
Definition
B. Tyr – Trp – Pro – Ser - Thr
Term
Where is the main location where DNA replication takes place
Definition
nucleus
Term
What is the location where Krebs cycle takes place.
Definition
Mitochondria
Term
What is the barrier between nucleus and cytoplasm
Definition
lipid bilayer
Term
4. Which of the following is bounded by 2 lipid bilayers?

A. lysosome
B. rough endoplasmic reticulum
C. mitochondrion
D. secretory vesicle
Definition
mitochondrion
Term
What is the site of steroid hormone synthesis
Definition
SER
Term
Where is the location of electron transport protein complexes
Definition
In the cell membrane of the mitochondria
Term
What is the site of synthesis of proteins intended for function within the nucleus.
Definition
cytosol ribosomes
Term
What is the site where proteins are tagged and sorted for delivery to appropriate destinations
Definition
Golgi Apparatus
Term
9. Loss of function of ribosomes would produce which of the following?
A. Increased proteins in secretory vesicles.
B. Increased proteins in lysosomes.
C. Increased proteins in the plasma membrane.
D. Increased proteins in the lumen of the rough endoplasmic reticulum
E. Increased cytoplasmic concentration of amino acids
Definition
E. Increased cytoplasmic concentration of amino acids
Term
Which of the following is (are) synthesized in the nucleus but function(s) in the cytoplasm?

A. DNA
B. proteins
C. ribosomal subunits
D. A and B
E. A and C
F. B and C
G. A, B, and C
Definition
C. ribosomal subunits
Term
What region of a steroid is hydrophilic?
A. the methyl (–CH3) groups
B. the terminal hydroxyl group
C. the ring structures
D. the long hydrocarbon chain
Definition
B. the terminal hydroxyl group
Term
Which of the following substances would most likely diffuse across a cell membrane the fastest?
A. glucose
B. water
C. fatty acid
D. carbon dioxide gas (CO2)
E. estradiol (a lipid-like hormone)
Definition
D. carbon dioxide gas (CO2)
Term
In an experiment involving planar bilayers, a solution containing substance Z is added on the left side of the membrane while pure water is added on the right side. After 30 minutes the researchers test for the presence of substance Z on each side of the membrane. The right side tests negative for substance Z. What can you conclude?
A. The experiment failed.
B. The bilayer was permeable to substance Z
C. The water level on the left side would be higher than the water level on the right side
D. The left side would probably test negative substance Z.
Definition
C. The water level on the left side would be higher than the water level on the right side
Term
You have a planar bilayer with equal amounts of saturated and unsaturated phospholipids. After testing the permeability of this membrane to glucose, you increase the proportion of unsaturated phospholipids in the bilayer. What will happen to the membrane’s permeability to glucose?
A. You can’t predict the outcome. You simply have to make the measurement.
B. Permeability to glucose will increase.
C. Permeability to glucose will decrease.
D. Permeability to glucose will stay the same.
Definition
B. Permeability to glucose will increase.
Term
What will happen to a red blood cell, which has an internal solute concentration of about 0.9 percent (0.9 g/100ml), if it is placed into a beaker containing a solute concentration of 0.45 percent (assume the cell membrane is impermeable to the solutes on either side)?
A. The cell would shrink because the solution in the beaker is hypotonic.
B. The cell would shrink because the solution in the beaker is hypertonic.
C. The cell would swell because the solution in the beaker is hypotonic.
D. The cell would swell because the solution in the beaker is hypertonic
E. There would be no change in cell volume because the solution in the beaker is isotonic.
Definition
C. The cell would swell because the solution in the beaker is hypotonic.
Term
1) Relative magnitude of concentration gradient: 1 unit
2) Relative magnitude of concentration gradient: 2 units
3) Relative surface area of the membrane: 1 unit
4) Relative surface area of the membrane: 2 units
5) Relative lipid solubility of the particle: 1 unit
6) Relative lipid solubility of the particle: 2 units
7) Relative charge of the particle: 0 units
8) Relative charge of the particle: 1 units

16. Assemble the set of conditions (by choosing from options shown above) that would produce the slowest rate of diffusion of a particle across the membrane.

A. 1, 3, 5, 8
B. 1, 4, 6, 7
C. 1, 4, 5, 8
D. 2, 4, 6, 8
E. 2, 4, 6, 7
F. 2, 3, 5, 8
Definition
F. 2, 3, 5, 8
Term
You are using an experimental system with two chambers separated by a membrane (permeable to water, but not NaCl), as shown. You add equal amounts of NaCl to both chambers and wait. What happens to the water levels in the two chambers?









A. Chamber 1: falls Chamber 2: rises
B. Chamber 1: falls Chamber 2: falls
C. Chamber 1: rises Chamber 2: rises
D. Chamber 1 rises Chamber 2 falls
E. The water levels will be equal
Definition
E. The water levels will be equal
Term
18. Under what circumstances does membrane transport always require energy?
A. whenever moving molecules too big to cross directly through the phospholipid bilayer membrane
B. whenever a solute needs to be moved from low concentration to high concentration
C. whenever a solute is charged, such as an ion
D. whenever a molecule is polar
Definition
B. whenever a solute needs to be moved from low concentration to high concentration
Term
• Two identical solutions are separated by a planar bilayer (side 1 and side 2).
• Substance X is dissolved in the solution on side 1 and allowed to equilibrate.
• 30 minutes later the concentration of substance X is equal on both sides

19. Substance X is most likely a

A. large polar molecule
B. small charged molecule
C. small nonpolar molecule
D. large protein
Definition
C. small nonpolar molecule
Term
• Two identical solutions are separated by a planar bilayer (side 1 and side 2).
• Substance Y is dissolved in the solution on side 1 and allowed to equilibrate.
• 30 minutes later there is still no substance Y on side 2
• An experimental protein is added to the bilayer
• 30 minutes later there is still no substance Y on side 2
• 30 minutes after addition of ATP to the bath on both sides there is still no substance Y on side 2.

20. Which of the following would likely be present at this point in the experiment?

A. The water level on side 1 is higher than on side 2
B. The water level on side 2 is higher than on side 1
C. The water level on both sides is the same
Definition
A. The water level on side 1 is higher than on side 2
Term
What accumulates in cristae and intermembrane spaces
Definition
Hydrogen ions
Term
What joins with oxaloacetate to begin the Krebs cycle.
Definition
Acetyl CoA
Term
What's absence leads to fermentation.
Definition
O2
Term
What is reduced O2.
Definition
H2O
Term
What is driven by a proton (H+) gradient.
Definition
ATP synthase
Term
26. Which of the following represents an oxidation reaction?

A. O2 is converted to H2O
B. NADH is converted to NAD+
C. FAD is converted to FADH2
D. CO2 is converted to C6H12O6 (glucose)
Definition
B. NADH is converted to NAD+
Term
If the enzyme that converts pyruvate to acetyl CoA were inhibited, which of the following would occur?

A. NADH production would increase
B. ATP production would increase
C. CO2 production would increase
D. acetyl CoA concentration in the mitochondrial matrix would increase
E. pyruvate concentration in the cytoplasm would increase
Definition
E. pyruvate concentration in the cytoplasm would increase
Term
If the enzyme that converts pyruvate to acetyl CoA were inhibited, which of the following would occur?

A. NADH production would increase
B. ATP production would increase
C. CO2 production would increase
D. acetyl CoA concentration in the mitochondrial matrix would increase
E. pyruvate concentration in the cytoplasm would increase
Definition
E. pyruvate concentration in the cytoplasm would increase
Term
28. Which of the following does not take place in the cytoplasm?

A. Conversion of glucose to pyruvate
B. Conversion of ADP to ATP
C. Conversion of NAD+ to NADH
D. Converson of pyruvate to acetyl Co A
Definition
D. Converson of pyruvate to acetyl Co A
Term
Following glycolysis, the Krebs cycle, and oxidative phosphorylaton, most of the energy from the original glucose is in the form of:
A. ATP
B. CO2
C. H2O
D. NADH and FADH2
Definition
A. ATP
Term
30. How many molecules of ATP are generated from glucose under anaerobic conditions?
A. 1
B. 2
C. 4
D. 8
E. 30
Definition
B. 2
Term
Plants constantly use CO2 to produce carbohydrate. This CO2 comes directly from

A. NADPH
B. ATP
C. water
D. light
E. chlorophyll
F. atmospheric air
Definition
F. atmospheric air
Term
What is one biochemical even that occurs in a chloroplast during the light-dependent phase?

A. ATP synthase is inhibited
B. A high concentration of H+ ions is produced in the thylakoid lumen
C. O2 is reduced to water
D. NADPH is oxidized
Definition
B. A high concentration of H+ ions is produced in the thylakoid lumen
Term
If the activity of rubisco were increased, which of the following would occur?

A. CO2 would increase
B. ATP would increase
C. NADPH would increase
D. glucose production would increase
Definition
D. glucose production would increase
Term
Which of the following would decrease the rate of ATP synthesis in chloroplasts?

A. increase the amount of H2O
B. increase the amount of CO2
C. poke holes in the thylakoid membranes
D. increase light
Definition
C. poke holes in the thylakoid membranes
Term
What is the first organic compound that includes “fixed” CO2.
Definition
3-phosphoglycerate
Term
What transforms light energy into NADPH
Definition
photosystem I
Term
What is found in both chloroplast thylakoid membranes and mitochondrial inner membranes.
Definition
D-ATP Synthase
Term
The final electron acceptor(s) associated with photosystem I is/are:
A. oxygen
B. hydrogen ions
C. NADP+
D. pheophytin
E. CO2
Definition
C. NADP+
Term
The light-independent reactions of plants function to make organic molecules using carbon dioxide as a carbon source. What is the electron source that helps reduce carbon dioxide to sugars and other organic molecules?
A. NADH
B. NADPH
C. ATP
D. O2
E. H2O
Definition
B. NADPH
Term
The electrons of photosystem II are excited and transferred to electron carriers. From which molecule or structure do the photosystem II replacement electrons come?
A. pheophytin
B. photosystem I
C. water
D. oxygen
Definition
C. water
Term
What is Acetyl CoA
Definition
Its main function is to convey the carbon atoms to the citric acid cycle to be oxidized for energy production. (Broken down from Pyruvate, combines with oxaloacetate to enter citric acid cycle.
Term
What role does carbon dioxide play in the respiration
Definition
Is the waste product of the citric acid cycle, comes from sugars.
Term
What role does Oxygen play in respiration
Definition
Is the final electron acceptor, becomes water. Is also kind of a waste product
Term
What does NAD+ do in cellular resp
Definition
In the krebs cycle, hydrogen attaches to it to become NADH
Term
What is the role of NADH in cell. respiration.
Definition
NADH is transported to the electron chain where the hydrogen is cleaved off and used in the ETC or in the hydrogen concentration gradient
Term
What is the role of phosphate in cellular respiration
Definition
ATP can be triphosphorylated or diphosphorylated
Term
What is the role of Hydrogen Ions in cellular respiration
Definition
These create a gradient that then travels through the ATP synthase, generating ATP as they go through
Term
What is the role of H2O in cellular respiration
Definition
It is a waste product of cell. respiration,
Term
What is the role of ATP synthase in cell. respiration
Definition
THis is what generates the most portion of ATP
Term
What is NADPH
Definition
This is in the last step of the electron chain of light reactions in photosynthesis. It is then used as reducing power for the biosynthetic reactions in the Calvin cycle
Term
What is photosystem I
Definition
the second system (was discovered first) Uses the energy from photons, they use the excited molecules to form the new molecule
Term
What is photosystem II
Definition
is the light dependent complex. Uses photons of light to energize electrons that are then transfered to NADPH. It oxidizes water to hydrogen (used for protein gradient and ATP sythnase)
Term
What is ATP synthase
Definition
creates the ATP molecules using the hydrogen gradient
Term
What is 3-phosphoglycerate
Definition
is the resultant of the split of 6 carbon intermediate that is unstable 2 of these are formed for each molecule of CO2
Term
What is glyceraldehyde 3- phosphate
Definition
in the calvin cycle two 3-phosphoglycerate moleucles are reduced to form two of these (G3)
Term
What is ribulose bisphosphate
Definition
this is the molecule that carbon dioxide reacts with in carbon fixation.
Term
What is rubisco
Definition
This enzyme (ribulose bisphosphate carboxylase oxygenase) catalyzes RuBP with carbon dioxide in order to synthesize a highly unstable 6 carbon intermediate which decays to glycerate 3 phosphate
Term
A cell has 2 homologous pairs of chromosomes. In the unreplicated state (prior to mitosis or meiosis), each homolog of chromosome 1 weighs 1 unit and each homolog of chromosome 2 weighs 2 units. At a certain stage in the life cycle of this cell (including mitosis or meiosis) all of the DNA is removed and weighed. Match the following descriptions with the appropriate total DNA weight (you may use an answer more than once).

A. 3 units/cell
B. 6 units/cell
C. 9 units/cell
D. 12 units/cell
E. 15 units/cell
F. 24 units/cell

When the cell is in metaphase of meiosis I...
Definition
D. 12 units/cell
Term
A cell has 2 homologous pairs of chromosomes. In the unreplicated state (prior to mitosis or meiosis), each homolog of chromosome 1 weighs 1 unit and each homolog of chromosome 2 weighs 2 units. At a certain stage in the life cycle of this cell (including mitosis or meiosis) all of the DNA is removed and weighed. Match the following descriptions with the appropriate total DNA weight (you may use an answer more than once).

A. 3 units/cell
B. 6 units/cell
C. 9 units/cell
D. 12 units/cell
E. 15 units/cell
F. 24 units/cell
When the cell has just completed meiosis I and cytokinesis...
Definition
B. 6 units/cell
Term
A cell has 2 homologous pairs of chromosomes. In the unreplicated state (prior to mitosis or meiosis), each homolog of chromosome 1 weighs 1 unit and each homolog of chromosome 2 weighs 2 units. At a certain stage in the life cycle of this cell (including mitosis or meiosis) all of the DNA is removed and weighed. Match the following descriptions with the appropriate total DNA weight (you may use an answer more than once).

A. 3 units/cell
B. 6 units/cell
C. 9 units/cell
D. 12 units/cell
E. 15 units/cell
F. 24 units/cell
When the cell is in G1...
Definition
B. 6 units/cell
Term
A cell has 2 homologous pairs of chromosomes. In the unreplicated state (prior to mitosis or meiosis), each homolog of chromosome 1 weighs 1 unit and each homolog of chromosome 2 weighs 2 units. At a certain stage in the life cycle of this cell (including mitosis or meiosis) all of the DNA is removed and weighed. Match the following descriptions with the appropriate total DNA weight (you may use an answer more than once).

A. 3 units/cell
B. 6 units/cell
C. 9 units/cell
D. 12 units/cell
E. 15 units/cell
F. 24 units/cell
When the cell is in metaphase of mitosis...
Definition
D. 12 units/cell
Term
Which of the following cell(s) is(are) diploid?

A. A cell that just entered metaphase of meiosis I.
B. A cell that just entered metaphase of meiosis II.
C. A sperm cell
D. A & B
E. A & C
F. B & C
G. A, B, & C
Definition
A. A cell that just entered metaphase of meiosis I.
Term
A human sperm cell (23 homologous pairs of chromosomes) is examined for DNA content. Which of the following best describes its DNA make up?

A. 46 chromosomes with no sister chromatids
B. 46 chromosomes with 92 sister chromatids
C. 92 chromosomes with no sister chromatids
D. 92 chromosomes with 184 sister chromatids
E. 23 chromosomes with 46 sister chromatids
F. 23 chromosomes with no sister chromatids
Definition
F. 23 chromosomes with no sister chromatids
Term
At the end of mitosis and cytokinesis, each daughter cell has:

A. one quarter the DNA of the parent cell
B. half the DNA of the parent cell
C. identical DNA to that of the parent cell
D. twice the DNA of the parent cell
Definition
C. identical DNA to that of the parent cell
Term
At the end of mitosis and cytokinesis, each daughter cell has:

A. one quarter the DNA of the parent cell
B. half the DNA of the parent cell
C. identical DNA to that of the parent cell
D. twice the DNA of the parent cell
Definition
C. identical DNA to that of the parent cell
Term
DNA is composed of four nucleotides: adenosine, cytosine, thymidine, and guanosine. If scientists introduced radioactive thymidine into the growth medium of the cells, it would be incorporated into the DNA molecule:

A. at any point in the cell cycle
B. when centromeres split so the two chromosomes can be separated
C. during S phase only
D. as the cell enters G1 of interphase
Definition
C. during S phase only
Term
Regulatory proteins that serve to prevent a cell from entering the S phase under conditions of DNA damage are also known as:

A. mitotic spindles
B. kinetochores
C. antibodies
D. tumor suppressors
Definition
D. tumor suppressors
Term
A cell has two homologous pairs of chromosomes. For each chromosome, each single strand of DNA (sense or antisense strand) is 50 bases long. If the average weight of deoxynucleotides is 310, what is the weight of DNA in a daughter cell that is in metaphase of meiosis II?

A. 31,000
B. 62,000
C. 124,000
D. 248,000
Definition
C. 124,000
Term
For the garden pea, yellow (Y) seed color is dominant and green (y) seed color is recessive. Also, green (P) pod color is dominant and yellow (p) pod color is recessive. What is the phenotype of a pea plant with the YyPp genotype?

A. yellow seed, green pod
B. yellow seed, yellow pod
C. green seed, green pod
D. green seed, yellow pod
Definition
A. yellow seed, green pod
Term
If two parent garden peas, both with the YYPp genotype, are crossed what will be the phenotype(s) of the offspring?

A. All yellow seeds, green pods
B. All green seeds, green pods
C. All yellow seeds, yellow pods
D. All green seeds, yellow pods
E. half yellow seeds, green pods and half yellow seeds, yellow pods
F. half green seeds, green pods and half green seeds, yellow pods
G. ¾ yellow seeds, green pods and ¼ yellow seeds, yellow pods
H. ¾ green seeds, yellow pods and ¼ green seeds, green pods
Definition
G. ¾ yellow seeds, green pods and ¼ yellow seeds, yellow pods
Term
Cystic fibrosis is a disease with defective chloride transport. Pulmonary airways and pancreatic ducts are pulled with thick mucus. Because of improving treatment, some patients live to their 40s or 50s. It is transmitted as a single-gene autosomal recessive disorder (both copies of the recessive allele must be present for the disease to occur). If an affected parent and an unaffected parent (who is not a carrier) have a child, what is the probability that the child will be affected?
A. 0%
B. 25%
C. 50%
D. 75%
E. 100%
Definition
A. 0%
Term
A male with red-green colorblindness (an X-linked recessive disorder) and an unaffected female (who is not a carrier) have a daughter. What is the probability (among female offspring) that the daughter will be affected?

A. 0%
B. 25%
C. 50%
D. 75%
E. 100%
Definition
A. 0%
Term
For the garden pea, round (R) seed shape is dominant and wrinkled (r) seed shape is recessive. A pea plant has round, green seeds (see #11 for designation of seed color alleles). Which of the following is(are) a possible genotype(s) of the plant?

A. RrYy
B. Rryy
C. RRyy
D. A & B
E. A & C
F. B & C
G. A, B, & C
Definition
F. B & C
Term
The plant described in #15 is crossed with a plant with the rryy genotype, and all the offspring are round and green. Based on these results, what is the genotype of the plant described in #15?

A. RrYy
B. Rryy
C. RRyy
D. A & B
E. A & C
F. B & C
G. A, B, & C
Definition
C. RRyy
Term
Assume a particular organism has a diploid chromosome number of 4. How many different chromosome combinations can be normally packaged among the gametes of this organism? (Assume that no crossing over occurs.)

A. 4
B. 8
C. 2
D. infinite number
E. 0
Definition
A. 4
Term
A man who is a dwarf (achondropasia) and woman who is not a dwarf want to have a child. Achondroplasia is an autosomal (not sex-linked) dominant disorder. The father is heterozygous for the disorder. What is the probability that their first child will have achondroplasia?

A. 0%
B. 1/8
C. 1/2
D. 1/4
E. 100%
Definition
D. 1/4
Term
How many unique gametes could be produced through independent assortment by an individual with the genotype AaBbCCDd?
A. 32
B. 4
C. 16
D. 8
E. 2
Definition
D. 8
Term
A woman who carries an X-linked recessive allele (gene) will pass it on to
A. all of her children
B. all of her sons
C. half of her sons
D. all of her daughters
Definition
C. half of her sons
Term
Pea plants with the genotype GgWw are crossed with others that have the genotype GGWw. Sixty four offspring plants are examined: 10 GGWW, 6 GgWW, 11 GGWw, 19 GgWw, 11 GGww, 7 Ggww. What is the expected distribution of offspring genotypes (in the order just presented)?

A. 16:16:8:8:8:8
B. 8:8:8:8:16:16
C. 8:16:8:16:8:8
D. 8:8:16:16:8:8
E. 16:8:8:8:8:16
Definition
D. 8:8:16:16:8:8
Term
If performing a chi square test on the data from #21, how many degrees of freedom are there?

A. 1
B. 2
C. 3
D. 4
E. 5
Definition
E. 5
Term
Which of the following is a reasonable null hypothesis for the chi square test?

A. The observed occurrence of offspring genotype is not as expected.
B. GGWW and GGww occur at equal frequencies.
C. Ggww and GgWW do not occur at equal frequencies.
D. None of the above
Definition
D. None of the above
Term
Which of the following is the correct value for the chi square statistic?

A. 4.375
B. 6.625
C. 8.188
D. 21.125
E. 29.5
Definition
A. 4.375
Term
Which of the following is a reasonable conclusion (χ2 table is on the next page)?
A. The observed occurrence of offspring genotype is as expected.
B. The observed occurrence of offspring genotype is different than expected.
C. The null hypothesis should be rejected
D. A & B
E. A & C
F. B & C
G. A, B & C
Definition
A. The observed occurrence of offspring genotype is as expected.
Term
Suppose a species of rabbit can be black (homozygous dominant), gray (heterozygous), or white (homozygous recessive). In an environment with lots of black rocks and white rocks, very few gray rabbits are found. However, there are many black or white rabbits. What type of natural selection?
Definition
Disruptive
Term
2. Collared flycatchers that lay small clutches (number of eggs laid) and large clutches are not as fit as those that lay intermediate sized clutches. If the clutch is too small, not enough offspring survive. If the clutch is too large, many offspring die because of inadequate parental care. Clutch size is genetically determined. What type of natural selection is this
Definition
stabilizing selection
Term
3. Large marine iguanas of the Galápagos have higher reproductive success than smaller iguanas. However, the large iguanas are generally in poor body condition because they do not eat enough; at higher temperatures their foraging efficiency improves. After a 5-yr period of above average temperatures the number of large marine iguanas is increased.
Definition
Directional selection
Term
4. In Cameroon, West Africa, black-bellied seedcrackers have access to either small or large seeds. Birds with small beaks crack and eat small seeds efficiently; birds with large beaks crack and eat large seeds efficiently. Birds with intermediate sized beaks don’t handle either seed well. Juvenile birds have a range of beak length from 6 mm to 11 mm. However, the adults who are old enough to breed have beaks that are either 6-7 mm or 9.5-11 mm in length.
Definition
Disruptive Selection
Term
5. Which of the following tend(s) to reduce genetic variability in a population?

A. Disruptive selection
B. Directional selection
C. Mutation
D. A and B
E. A and C
F. B and C
G. A, B, and C
Definition
Directional selection
Term
What is a chance mistake in DNA replication
Definition
genetic drift
Term
What tends to make two nearby populations more similar to each other
Definition
genetic flow
Term
What is an important mechanism for restoring genetic variation in a population lost because of natural selection
Definition
mutation
Term
9. Huntington’s disease is an autosomal dominant disorder that produces loss of normal motor control and dementia. Affected individuals often die early from secondary causes such as pneumonia. However, individuals are typically in their 40s or 50s before they become affected. Over time, we would expect genetic variation to _______________ for this trait.

A. Remain the same
B. Increase
C. Decrease
D. Fluctuate
Definition
Remain the same
Term
10. Genetic drift occurs in a population. Which of the following statements is true?

A. Involves influx of alleles from other populations
B. No change in allele frequencies is involved
C. Tends to make neighboring populations less similar
D. Always increases fitness of the population
E. Has greatest effect in small
Definition
E. Has the greatest effect in small populations
Term
11. A mutation in a single gene can make M. tuberculosis resistant to the antibiotic, rifampin. Treating an individual with tuberculosis with rifampin led to the generation of a population of resistant bacteria. In this case

A. the rifampin induced mutations in the bacteria that led to drug resistance.
B. disruptive selection occurred.
C. bacteria with a pre-existing mutation were more fit
D. the development of resistance was independent of selecton
Definition
C. bacteria with a pre-existing mutation were more fit
Term
12. True or false. Natural selection can only occur for traits that are heritable.
Definition
True
Term
13. Which would be most likely to lead to new species?

A. Directional selection
B. Disruptive selection
C. Genetic drift
D. Gene flow
Definition
B. Disruptive selection
Term
What is the dependent variable
Definition
This is the variable that is created as a result of the independent variable (it is dependent upon the independent variable)
Term
How do you do standard deviation?
Definition
-find the mean
-subtract the mean from each piece of data
-square each of these
-add these together
-divide the number you got from adding them together by one less than the data set. (ex. if 27 values use 26)
-calculate the square root of the previous step.
Term
WHat is the mean
Definition
is the sum of all the values divided by the number of values
Term
What is the median
Definition
this can be found by taking all the numbers and putting them from lowest to highest, and then subtracting one value from each side till the middle number is found
Term
What does null hypothesis mean
Definition
Says that there is no relationship between two measured phenomena
Term
What do you use when comparing two sample means (whether the null hypothesis should be accepted.
Definition
T test
Term
What is the formula for a T test
Definition
Mean1-Mean2/ pooled variation.
Term
By convention, the null hypothesis is rejected if the t value is...
Definition
in the most extreme 5.% of all possible values (greater than the critical value of t)
Term
What is a paired T test
Definition
This is where each experimental subject is observed before and after a treatment.
Term
If there are more than two groups that are tested what do you do (statistics wise)
Definition
Do analysis of variance
Term
What is standard deviation
Definition
its the measurement of variability or diversity (high deviation is spread out, low is closer to the mean)
Term
What is carbon fixation
Definition
The process by which autotrophs (usually driven by photosynthesis) change carbon dioxide into sugars.
Term
What is carbon fixation
Definition
The process by which autotrophs (usually driven by photosynthesis) change carbon dioxide into sugars.
Term
What happens in the Calvin Cycle
Definition
-RuBisCo combines with carbon dioxide to form 3-phosphoglycerate,
-ATP is then used to make this a 1,3 bisphosphoglycerate
-NADPH then is broken down (goes to NADP+) to make this into Glyceraldehyde 3-phosphate
-this then regenerates to ribulose 5-phosphate
-this is then converted to ribulose 1,5-bisphosphate
Term
Sister chromatids are what
Definition
two identical copies of a chromatin connected by a centromere.
Term
Homologous chromosomes are what?
Definition
they are two different copies of the same chromosome that diploid organisms inherit, one from each parent.
Term
When are sister chromatids created
Definition
during the S subphase of interphase
Term
Sister chromatids have the same genes and the same ____, chromosomes have the same genes but ______ each which might or might not be the same as each other.
Definition
Alleles, two copies of alleles
Term
Diploid means what
Definition
It has two homologous copies of each chromosome, one from Mom, one from Dad (2n=2X) Humans diploid cells have 46 chromosomes, gametes have 23 chromosomes
Term
Haploid is...
Definition
when it has only one set of chromosomes
Term
Describe Mitosis
Definition
-Chromosomes make a copy of themselves (s phase)this is a homologous pair
-they align themselves in the center, microtubules form, and pull them apart
-cytokinesis
Term
Cells grow during what?
Definition
G1
Term
Cells divide in what
Definition
M phase
Term
Cells prepare for mitosis when
Definition
in G2 phase
Term
Cells duplicate chromosomes when
Definition
S phase
Term
What happens in meiosis
Definition
-begins with one cell containing two copies of each chromosome
-these are duplicated creating two exact copies of the maternal and paternal versions of each chromosome (homolog)
-these are then pulled apart
-cytokinesis
-these then align in the center and are pulled apart,
-cytokinesis again
the whole process results in the 1 chromosome from each parent that are different from the parental strand
Term
Independent assortment states what
Definition
that alleles of different genes assort independently of one another during gamete formation.
Term
How do you do a Chi Squared test
Definition
-define the expected (e) (the null hypothesis) and find the observed (o)
-find the deviation (d=o-e)
-square the deviation
-divide your squared answer by the expected
-add these values together
-find the degrees of freedom and then compare to the critical value
(to reject the null hypoth it must be greater than the critical value
Term
If the electron transport chain stops how much less ATP is produced?
Definition
1/14.5 (You end up producing 2 ATP out of 29)
Term
What does a time control do?
Definition
It is a negative control, it allows for you to have something to compare against. This would be for example rats given a placebo over a measured time
Term
What does a ribozyme do?
Definition
It catalyzes formation of peptide bonds in growing peptide (N to C terminus) or 3' to 5'
Term
DNA poly III moves toward what
Definition
the replication fork
Term
RNA poly reads _____ and synthesizes _____
Definition
3-5, 5-3
Term
Why are there only left handed enantiomers found in humans
Definition
No one knows why
Term
Primary structure is?
Definition
Just the basic chain of bases (no shape just straight line)
Term
What determines secondary structure?
Definition
Hydrogen bonds
Term
If sulfur was found in a chain of amino acids what effect would this have?
Definition
It helps shape its tertiary structure
Term
What forms the backbone of nucleic acid
Definition
sugar and phosphate groups with diester bonds
Term
What forms the backbone of a protein
Definition
Peptide bonds
Term
What are the pyrimidines
Definition
Cytosine, Thymine, Uracil
Term
What are the purines?
Definition
Guanine, Adenosine
Term
How are starches and cellulose similar
Definition
they have the same size monosachride units
Term
glycerol and fatty acids are bonded how?
Definition
Ester bonds
Term
How do ribosomes read
Definition
5-3 prime
Term
hypertonic solutions do what
Definition
crenate (to much solutes outside of cell causes water to leave cell and shrivel)
Term
Hypotonic solutions do what?
Definition
they swell and burst (too much solutes inside cell or not enough outside of cell)
Term
Where does the O2 from photosythesis come from
Definition
Water
Term
If the Calvin cycle is not working what happens
Definition
Glucose production goes down
Term
Pyruvate produces what?
Definition
CO2 NADH, Acetyl CoA
Term
If there were no mitochondria what could still take place in a cell
Definition
glycolysis
Term
What does glyceraldehyde 3 phosphate require for carbon fixation to occur?
Definition
NADPH and ATP
Term
The carbon found in glucose comes from what
Definition
CO2
Term
The Oxygen found in glucose comes from what
Definition
Atmospheric CO2
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