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Molecular Genetics
Genome Sequence-Chapter 5
10
Biology
Graduate
03/01/2011

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Term
RNAi
Definition
dsRNA look like viral RNA

response is to chop up the RNA; therefore, the mrna will not be produced
Term
over expression of a gene
Definition
lean to an unnatural phenotype

powerful promoters are expressed only in the correct tissue type
Term
Replacing genes
Definition
difficult, beginning with a gene of interest then later replacing the gene until the desired phenotype is produced
Term
Site directed mutagenesis
Definition
-synthesize the oligonucleotide in order to create a new ssDNA circle
-50% of the clones wont have the mutation
Term
locating gene expression
Definition
use a reporter gene that can be monitored such as lac Z, luciferase, or GFP
Term
gene product location
Definition
using an antibody to tag a specific protein; Ab is first conjugated to a marker and then fluoresces
-maker detection means target protein
Term
Genome percentages
Definition
30 percent of the genome is known, by comparitave genomics another 30 % was tentatively identified
Term
Orphan Family
Definition
when the gene has not been assigned but it has been found in other organisms
Term
transposon tagging
Definition
-placing a lacZ reporter ORF (lacking its promoter) in frame in a transposon
-if transposon lands in a gene lac z will be expressed yielding blue colonies
-problem is screening all of the mutants
Term
Molecular barcoding
Definition
solves the problem with screening thousands of mutants; can create kanR knockouts
-has universal primers as well as unique sequences (barcode) which will identify each deletion mutant
-measures the growth rate of each clone by how well represented its barcode is in the PCR product
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