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Microbiology
Summative 2 Wk 10, 11, 12
72
Medical
Graduate
11/03/2010

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Term
Most common isolates of open fracture Osteomyelitis
Definition
Organisms from soil (ex. Staphylococcus aureus*)
Nosocomial pathogens (ex. Pseudomonas aeruginosa)
Normal skin flora ( ex. Propionibacterium acnes and Staphylococcus)
Term
Pseudomonas aeruginosa morphology, culture
Definition
Gram negative rods in pairs and singles
Does Not ferment carbohydrates; Obligate anaerobe
Blood Agar (BAP)- brown colonies, semi clearing
MacConkey Agar- colorless colonies lactose-non fermenting
Nutrient Agar- blue-green colonies
Term
Hematogenous seeding (osteomyelitis) in Children
Definition
Most common isolates:
Staphylococcus aureus, Strep. pneumoniae, Haemophilus influenzae type B
Population:
predominantly encountered in the pediatric population w/ 85% in children under 17.
Body Region:
In children this is found at the end of the long bones’ metaphysis.
Signs and Symptoms:
Chills, high fever, malaise, local pain, swelling
Bone cultures are positive only 50% of the time
Term
Hematogenous Osteomyelitis of the Adult
Definition
Body Region:
In adults this most often affects the spine.
Most common isolates:
S. aureus and coagulase negative Staphylococci
Signs and Symptoms:
Insidious pain and tenderness in the spine (90%); Fever(50%); Motor and sensory deficits (15%)
Term
Osteomyelitis Due to Contiguous Spread
Definition
Causes:
Infective arthritis
Post-trauma infections
Soft tissue infections
Puncture wounds
Term
Contiguous-focus Osteomyelitis without Generalized Vascular Insufficiency
Definition
Most common isolate :
S. aureus
can be poly microbial including gram-negative bacilli and anaerobic organisms.
Common Causes:
Surgical reduction, internal fixation of factures, prosthetic devices, soft tissue infections
Timing:
1 month after trauma, surgery or soft-tissue infection.
Symptoms:
Low-grade fever, drainage and pain. Loss of bone stability, necrosis and soft tissue damage
Term
Acute Ischemic Neuropathic Osteomyelitis and/or Vascular Insufficiency
Definition
Bacterial Isolates
Mostly polymicrobial including aerobic and anaerobic organisms
Most common causes:
Foot ulcer due to : neuropathy, vascular insufficiency and hyperglycemia
Signs, Symptoms and Diagnosis
A chronic ulcer with a surface area of more than 2 cm2 or a positive “probe to bone” test. Increased erythrocyte sedimentation rate, C-reactive protein.
Term
Intravenous Drug Users and Osteomyelitis
Definition
Most common isolates:
S. aureus, Pseudomonas, Candida, Eikenella corrodens. Mycobacterial osteomyelitis is more common in these patients.
Unusual locations
Sternoclavicular, sternochondral joint, sacroiliac joint and symphysis pubis
Term
osteomyelitis with Hemodialysis patients
Definition
Location:
Vertebral osteomyelitis
Frequent Isolates:
S. aureus and S. epidermidis
Oxacillin resistant S. aureus is common
Timing:
12 to 72 months after initiation of hemodialysis
Term
osteomyelitis with indwelling catheters
Definition
Location:
Frequently sacroiliac joint infections although it occurs rarely
Frequent Isolate:
S. aureus
Term
Sickle cell Disease and Osteomyelitis
Definition
Common isolates:
Salmonella, S. aureus, other gram negatives
Location:
Long bone and septic arthritis
Genetic component of susceptibility:
HLA class II DRB 15 is protective while
HLA class II DQB1 03 is susceptible
Probable mechanism
Patchy ischemic infarction in the bowel due to sickling
Symptoms:
bone pain and fever, followed in 1 to 2 weeks by spiking fever, chills, and leukocytosis
Term
Salmonella morph and culture
Definition
Structure and Morphology:
Gram-negative facultative, rod-shaped, with peritrichous flagella.
Growth:
Can be isolated on MacConkey agar
Usually Non-lactose fermenters
Acid and gas from glucose fermentation
Produce H2S
Disease:
Usually cause two diseases:
Salmonellosis; enteric fever (typhoid)
Acute gastroenteritis, resulting from food borne infection/intoxication.
Term
Mycobacterium tuberculosis’ in Spinal Osteomyelitis morph, culture
Definition
Structure and morphology
Acid Fast, rods , intracellular
Resistant to chemicals and drying due to thick cell wall with mycolic acids.
Growth:
Strictly aerobic and slow growing
Transmission:
Primarily respiratory route but disseminated disease can seed many tissues of the body (20%0.
Osteomyelitis:
1-5% of all tuberculosis cases musculoskeletal
Vertebral osteomyelitis due to M. tuberculosis =Pott’s disease
People at risk:
HIV patients, IV drug users and other immunocompromised patients are at risk of Mycobacterium infection
Term
Staph aureus morph, culture
Definition
Gram + cocci, non-motile
Catalase +
Facultative anaerobe
β-hemolytic
Salt and Temp tolerant
Golden pigmented colonies
Anti-phagocytic polysaccharide capsule
Coagulase producer
Term
Pathogenesis of S. aureus in osteomyelitis
Definition
Invasion:
Hyaluronidase, Staphylokinase, Lipase, Dnase
Adherence: The MSCRAMMS adhesion proteins are important to adhesion to host intracellular matrix proteins including that of bone:
Collagen binding protein – cna
Fibronectin binding proteins – fnbA, fnbB, clf A, clfB
Sialoglycoprotein adhesin
Tissue destruction:
Cytolytic toxins: α, β, δ, γ and the P-V leukocidin
Term
Penicillin resistant S. aureus
Definition
Penicillinase encoded by bla
Clips the beta-lactam ring.
Plasmid encoded and easily transferable
Term
MRSA: Methicillin Resistant S. aureus
Definition
Defined as having oxacillin MIC of greater than 4μg/ml
All have the mecA gene.
mecA codes for a very low-affinity PBP2A
PBPs link peptidoglycan NAG /NAM (pentapeptide) precursors into polymers that are then linked by peptide bonds
Resistant to all beta-lactams but remain sensitive to vancomycin, the drug of choice
Term
Vancomycin
Definition
drug that prevents cell wall assembly by binding to the pentapeptide side chains.
D ala-D ala
Term
VISA and VRSA: Vancomycin intermediate and resistant S. aureus
Definition
Transposon: TN1546 (vanA) is on a multi-resistance conjugative plasmid.
Van A gene products modify the Nam-peptide terminus from D-ala-D-ala to D-ala –D-lactate
The modified precursors don’t bind *** and therefore can be used for cell wall assembly.
Alternative Treatment : Daptomycin
Term
Mechanisms of Acquiring Antibiotic Resistance
Definition
Possibility 1: Conjugation between E. faecalis and S. aureus followed by transposition into the S. aureus multiple drug resistance plasmid..
The multi-drug resistant plasmid carries resistance to beta lactams, vancomycin, trimethoprim and gentamycin/kanamycin/trobramycin
75% of Enterococcus faecalis isolates are vancomycin resistant (VRE)
Possibility 2: Transduction followed by transposition
The TN1545 transposon is self-transferable.
Term
A(delta) fibers
Definition
small, quick myelinated fibers for pain and temp (acute pain)
Term
C fibers
Definition
larger, slower, unmyelinated fibers for pain and temp (aching pain)
Term
Resting membrane potential
Definition
-60mV to -80mV
Term
neuromodulation
Definition
one neuron uses different neurotransmitters to connect to several neurons
Term
Kinesin
Definition
Anterograde transport of a vesicle along a microtubule is mediated by ***. Travels from the minus end of a microtubule to the plus end. Fresh components made in soma and moved into axon. Rapid and slow
Term
dynein
Definition
Retrograde transport of a recycled synaptic vesicle along a microtubule is mediated by cytoplasmic ***. Travels from the plus end of a microtubule to the minus end. Worn out materials are returned to the soma for degradation in lysosomes. Rapid.
Term
oligodendrocytes
Definition
wrap myelin sheaths around axons in the CNS
Term
Schwann cells
Definition
wrap myelin sheaths around axons in the PNS
Term
ependymal cells
Definition
Line the ventricular system of the brain. Cilia on their free surface help the propulsion of cerebrospinal fluid through the ventricles.
Term
Nucleus:
Definition
Collection of structurally and functionally related neurons
Term
Neuropil:
Definition
: Dense network of dendrites, axons, and glial cell processes between neurons
Term
stratum
Definition
layer of neurons within the CNS
Term
tract
Definition
A collection of nerve fibers in the CNS
Term
fasciculi
Definition
A bundle of neuronal axons/fibers enclosed by perineurium
Term
lemniscus
Definition
Bundle of sensory fibers in the brain stem
Term
ganglion
Definition
: aggregation of nerve cell bodies
Term
Nerve def
Definition
Peripheral nerve; fascicles of axons enclosed by a perineurium
Term
rami
Definition
Dorsal/ventral branches of the spinal nerves
Term
root def
Definition
Initial segments of a nerve leaving the CNS
Term
Substance P
Definition
key excitatory neurotransmitter mediating the perception of pain
Term
EPSP (Excitatory postsynaptic potentials)
Definition
Postsynaptic potential that hyperpolarizes due to K+ channel opening
Term
IPSP(Inhibitory postsynaptic potentials)
Definition
Postsynaptic potential that depolarizes due to Na+ channels opening
Term
Metabotropic receptors
Definition
binding of NT to surface receptor, but not to a channel directly.
Term
Norepinephrine fx
Definition
excitatory (generally) or inhibitory
Term
dopamine
Definition
generally excitatory, may be inhibitory at some sites
Term
serotonin
Definition
generally inhibitory
Term
GABA and glycine
Definition
inhibitory
Term
glutamate and aspartate
Definition
excitatory
Term
serotonin and dopamine
Definition
biogenic amines that influence sleep, mood, attention and learning
Term
glutamate
Definition
plays role in a-delta pain nerve fiber endings
Term
PSA
Definition
Prostate cancer marker
Term
CA15-3
Definition
Breast cancer marker
Term
hCG
Definition
Placental tumor marker
Term
CEA
Definition
Colorectal cancer marker
Term
AFP
Definition
Hepatocellular carcinoma and some germ cell tumor markers
Term
CA19-9
Definition
Pancreatic and gastric carcinoma marker
Term
CA125
Definition
Ovarian cancer marker
Term
The most common etiologies of acute septic arthritis of a native joint
Definition
S. aureus (46%)
Streptococci (S. pyogenes
and other β-hemolytic spp)
Gram negative bacilli ( ex. E. coli and Pseudomonas)
Neisseria gonorrhoeae
Term
Gonococcal Arthritis (Neisseria gonorrhoeae)
Definition
Virulence factors:
Pili, PorB, Opa, and LOS
Phase variation
Drug resistance
Classical triad presentation:
Dermatitis
Tenosynovitis
Polyarthritis
Laboratory tests: Gram stain (-)
50,000 to 100,000 leukocytes/mm3 in synovial fl
Term
PorB
Definition
is involved in preventing phagolysosome fusion, thus helping it avoid killing by complement, and facilitates invasion.
Term
Pili
Definition
required for adherence to mucous membrane
Term
Opa
Definition
is an opacity protein. It typically mediates firm adhesion to epithelial cells.
Term
LOS
Definition
stands for lipooligosaccharides, which promote adhesion and invasion of host cells
Term
phase variation
Definition
generates heterogeneity
Term
viral agents common to the United States that have been associated with arthritis or arthropathy
Definition
 Human parvovirus B19
 Rubella virus
 HIV and HTLV-1- known for AIDS/leukemia
 Hepatitis B or C
Term
four bacterial agents known to cause chronic infectious arthritis
Definition
Mycobacteria tuberculosis, Borrelia burgdorferi (Lyme), Treponema pallidum (Syphilis), Tropheryma whippelii
Term
capable of causing infectious arthritis in the course of disseminated infections, based on endemicity
Definition
Blastomyces dermatitidis, Coccidioides immitis, Paracoccidioides brasiliensis,and Sporothrix schenckii
Term
Blastomyces dermatitidis
Definition
• primarily pulmonary
• disseminates to joints bone and skin
• broad based buds
• endemic to SE, NE, and Central US
Term
Coccidioides immitis
Definition
• Spread through inhalation of arthroconidia, which grow into spherules and produce endospores
• Those more at risk are older, male, w/chronic disease, African American, or Filipino.
• Found in Southwest US. Often referred to as Valley fever or San Joaquin fever
Term
Sporothrix schenckii
Definition
• Almost always lymphocutaneous
• Cutaneous inoculation not pulmonary ( Rose Gardeners disease- puncture with soil involved)
• Arthritis is usually chronic, affecting weight bearing joints.
• Cigar shaped yeast form and “daisy petal” formation on conidiophores
• Found in Japan, North and South America
Term
Paracoccidioides brasiliensis
Definition
• Primary dimorphic endemic fungal infection in Latin American countries.
• Diagnosis is by observation of distinctive yeast form.
• The presence of multiple buds distinguished it from Cryptococcus neoformans
and Blastomyces dermatitis
Term
fungal agents that are most commonly associated with chronic infectious arthritis occurring in immunocompromised patients
Definition
Candida, Cryptococcus and Aspergillus
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