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Microbiology Lecture 13 Vocab
Metabolic Diversity
25
Biology
Undergraduate 2
02/14/2009

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Term
Methanogen
Definition

Electrons come from H2 to CO2 to make CH4 (methane)

 

Anaerobes

 

All Archaea

 

Chemolithotrophic

Term
Sulfate Reducer
Definition

Electrons go from Organic/H2 to SO42-/S

 

Chemoorganotrophic Anaerobe

 

They produce H2S (swamp odor) and FeS (corrosive black precipitate)

Term
Sulfur Oxidizers
Definition

Use S/H2S as electron donors and O2 as acceptor

 

Used during bioleaching and biomining

 

Produces SO42- and H2SO4

 

 

Term
Biomining
Definition

Uses sulfur oxidizers to get gold

 

Au2S3 --> Au + H2SO4

 

Gold sulfide is reduced to sulfide to leave the gold metal

 

Sulfide mineral removed from ground, possible flotation to form a concentrate, bioleaching to release the metals, metal recovery to produce a valuable resource

Term
Nitrogen Cycle
Definition
Conversion of N2 to NH4+ to NO2- to NO32- back to N2
Term
Nitrogen Fixation
Definition
Conversion of N2 to NH4+
Term
Root Nodule
Definition
Used in Rhizobium that has leg hemoglobin that binds to oxygen. Binding to oxygen decreases the oxygen concentrationa and avoids the inhibition of nitrogenase
Term
Nitrogenase
Definition
Enzyme used during nitrogen fixation used to convert N2 to NH4+
Term
Leghemoglobin
Definition

The heme used in root nodules to bind oxygen.

 

Binding to oxygen reduces the oxygen concentration allowing nitrogenase to be activated

Term
Nitrification
Definition

Conversion of NH4+ to NO2- or NO32- in the nitrogen cycle

Term
BOD (biochemical oxygen demand)
Definition

Measure of the amount of biologically degradable organic material in water.

 

This increases during nitrification so since there is less oxygen in the water this can cause fish to die.

Term
Denitrification
Definition

Conversion of NO32- to N2

 

Last step of the nitrogen cycle

Term

Enterobacteriaeceae

Definition

The good bacteria in our gut/large intestine that ferment nutrients

 

Facultative anaerobes

Term
Cyst
Definition

Resistant form of bacteria

 

Not as durable as endospores (protein coat), but they can resist drying out

 

Azotobacter forms cysts

Term
Social Gliding Motility
Definition

Myxobacteria exhibit this behavior

 

When they are starving they swarm together to break down complex nutrient sources

 

They aggregate into fruiting bodies

 

 If you increase the number of bacteria you increase the number of enzymes and therefore increase the digestion

Term

Filamentous rod

Definition

The shape of Streptomyces (produce many antibiotics as secondary metabolites)

 

Cells are long filaments that form chains of conidial spores at the end

Term
Caulobacter Life Cycle
Definition
Bacterium has flagella tail, the tail falls off then grows a stalk in place of the flagella. The stalk then sticks to a surface so it can produce a new cell.
Term
Stalked Cell
Definition
The Caulobacter that has formed its stalk after its flagella falls off
Term
Swarmer Cell?
Definition

The Caluobacter cell that still has its flagella

 

Motile cells of sheathed bacteria that disperse to new locations

Term
Photoluminesence
Definition

When the bacteria glow

 

Photobacterium fischerii produces this light in response to crowded growth conditions which is called quarum sensing

Term
Crown Gall
Definition
Tumur growth on plants when infected with argobacterium
Term
Ti Plasmid
Definition
In argobacterium and holds on to the T-DNA used to infect plant cells and cause the tumor
Term
T-DNA
Definition
On Ti plasmid in Argobacterium and is injected into plant cells to make the plant make a carbon source for the bacterium causing a tumor on the plant.
Term
Halophile
Definition

Organism that prefers or requires a high salt (NaCl) medium

 

(5M or 30% NaCl --> Dead Sea)

Term
Hyperthermophile
Definition

Mostly Archaea

 

Inhabit diverse environments (deep-sea vents to thermal hot springs)

 

Optimum growth between 70-110°C?

 

Electrons from Organic/H2 to S to produce H2S

 

Lives symbiotically with organisms that use H2S as electron donor (Sulfolobus or sulfur oxidizers)

 

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