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Microbiology 119 (Lecture 7)
N/A
21
Biology
Undergraduate 4
01/24/2009

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Term
What donates electrons to the electron transport system (ETS)?
Definition
NADH
Term
What accepts electrons from the electron transport system (ETS)?
Definition
Oxygen
Term
Where is the PMF generated?
Definition
Cytoplasmic membrane or mitochondrial membrane?
Term
What is the role of ATP synthase?
Definition
Used to drive synthesis of ATP
Term
Why is respiration associated with the cell membrane?
Definition
The membrane is needed to generate the PMF (?)
Term
Quinone (Q)
Definition
A hydrophobic non-protein electron carrier
Term
Cytochromes (cyt)
Definition
They are proteins containing an iron-porphyrin ring called heme. Several classes, differ in reduction potential
Term
What does the cell need to grow?
Definition
Appropriate nutrients:
  • Source of energy to fuel cell growth
  • Carbon for cell biosynthesis
  • Other nutrients, N,S, P, etc.
Appropriate environmental conditions:
  • pH, oxygen, temperature, etc.
Term
Catabolism
Definition
The breakdown of larger, more complex molecules into smaller, simpler ones, during which energy is released, trapped, and made available to work
Term
Anabolism
Definition
The synthesis of complex molecules from simpler ones during which energy is added as input
Term
ATP generation
Definition
  • Substrate-level phosphorylation
  • Electron transportphosphorylation (aKa respiration-linked phosphorylation)
Term
Substrate-Level phosphorylation
Definition
Transfer of Pi from a high energy phosphorylated intermediate to ADP by a kinase enzyme. Phosphorylatedintermediates are generated during: glycolysis, TCA cycle, and fermentation.
Term
Steps of Glycolysis
Definition
  • Start
  • Energy Input
  • Cleave
  • Reductions
  • Substrate level phosphorylation
  • Dehydration
  • Substrate level phosphorylation
  • End products
Term
Tricarboxylic Acid Cycle
Definition
Intermediates change from one form to another
  • Converts pyruvate to:
    • CO2
    • Reducing power
      • NADH
      • FADH2
      • Used in electron transport for additional ATP synthesis
    • ATP
Term
Electron Transport Phosphorylation
Definition
Required Components:
  • Cytoplasmic membrane
  • electron transport chain => redox reaction
  • Proton + charge gradient => pmf
  • Membrane-bound ATP synthase => ATP
Term
Redox Potential (E0')
Definition
Tendency to donate or accept electrons given in Volts. Standard conditions: pH 7.0, 1M, 25 degrees celsius
Term
Free Energy (Delta G)
Definition
The amount of energy in a system that is available to do work. A negative delta G indicates that the reaction is favorable and will proceed spontaneously. A positive delta G indicates that the reaction is unfavorable and will only proceed if energy is supplied
Term
Electron Transport Chain
Definition
  • A NADH dehydrogenase to oxidize the e-donor NADH
  • NADH - Diffusible electron carrier
  • Flavoproteins, proteins bound to flavins (FMN, FAD)
  • Iron sulfur proteins
  • Quinones - hydrophobic non-protein electron carriers
  • Cytochromes - proteins containing an iron-porphyrin ring called heme
  • Terminal oxidase (reductase) to reduce the e-acceptor oxygen to water
Term

NADH + H+ --> NAD+     E0' = -0.32 V

1/2 O2 --> H2O     E0' = +0.818 V

 

How much energy is released?

Definition
Delta E0' = 0.8181-(-0.32) = 1.138 V
Delta G0' = -n x F x Delta E0' (kJ/mol)
Delta G0' = -2 x 96.5 kJ/Vmol x 1.138 V
Delta G0' = -219.6kJ/mol
Term
How much energy does it take to make 1 ATP?
Definition
Delta G0' = +50 kJ/mol to form 1 mol ATP (Theoretical)
 
Delta G0' = +80 kJ/mol to form 1 mol ATP (True)
 
from Delta G0' of 220 kJ/mol --> 4.4 mol ATP theoretically
 
3 mol ATP/mol NADH were determined experimentally
Term
Inhibitors of ATP Synthesis
Definition
  1. Blockers (inhibitors) thatinhibit the flow of electrons through the system
    • Carbon monoxide, cyanide bind to cyt
  2. Uncouplers that allow electron flow, but disconnect it from oxidative phosphorlation
    • Dinitrophenol, lipid soluble make membrane leaky and destroy the PMF and ATP production by oxidative phosphorylation
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