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Microbio Final GI bugs and such
Gut bugs and final exam
52
Medical
Graduate
04/22/2010

Additional Medical Flashcards

 


 

Cards

Term
Staphylococcus aureus
Definition

G+ Coag+ Cat+


8 EXOTOXINS (A, B, C1, C2, C3, D, E, H)

Neuro (Vomit) + Enteric (diarrhoea)

NO adenylate cyclase stim.

Onset ~4 hr lasts ~ 1 day

Nausea, cramps, watery diarrhea, headache

WELL-HANDLED FOOD (Meat, cream pastries..)

Baird-parker plate (bulls-eye)  confirm COAGULASE

Term
Bacillus cereus
Definition

G+ rod   in chains    Aerobic or Facultative     spored

 

ENTERIC TOXIN  ST Neurotoxin

 

Soil, water, dust--> RICE, PLUSES, "Chinese food Synd"

 

Blood agar plate

Term
Clostridium Botulinum
Definition

G+    Rod  Anerobe   Fermenter   spore   exotoxin  Penicillin

Soil and gut of man and animals  

BOTULISM - CANNING

 

Neurotoxin - 8 types (A,B,C1,C2,D,E,F,G)  ABE USA

Toxin A 10-8g to kill !

18-36hr incubate, fatal <24hrs

FATAL TOXEMIA - reportable  confirm blood in stool

 

Term

Clostridium botulinium

 

Differential diagnoses

Definition

Guillian-Barre - ASCENDING paralysis


MS - DESCENDING paralysis, accented during EXCERCISE


Other food poisonings:  NO CRANIAL NERVE INVOLVEMENT


Chemical and non-microbe food poison- onset in MIN.

Term

 

 

INFANT BOTULISM

Definition

NOT food poisoning

 

Infants 2 wks - 6 mo

Spores germinate in GI tract

Vegetative cells release toxin (A,B)

Lethargy, loose head cntl, resp arrest

Tx: Botulism Immune Globulin BIG-IV heptavalent

or large dose of horse C. botulinum antitoxin (adults)

Term
MUSHROOM TOXIN
Definition

MOST COMMON

1. Short acting: wild mushtooms: muscarine,psilocybin

                          Incubate < 2 hrs, VOMIT, DIARRHEA

 

2. Long-acting: uncultivated - amantia

                         Incubate 4-8, DIARRHEA, VOMIT,

                         can be fatal

 

Term
MYCOCOTOXIGENIC FUNGI
Definition

MYCOTOXINS aspergillis, fusarium, penicillium

AFLATOXINS  aspergillis flavus - peanuts - temp/humid

CONTAMINATION:  Tree nuts, peanuts

 

SX

 Acute necrosis

Cirrhosis

carcinoma (liver)

Term
ciguaterra
Definition

Marine toxin
dinoflagellates 

large reel fish 

NOT denatured by cooking

 

extremity paresthesia

hot/cold TEMP REVERSAL

 

Term
SCROMBOID
Definition

Histadine--> HISTAMINE (scrombotoxin)

 

Scrombridae fish (tuna, mahi, marlin, bluefin)

 

BURNING SENSATION IN MOUTH + METAL TASTE

 

WATERY DIARRHOEA, NAUSEA 3-6HRS

DIZZZINESS, RASH, FACIAL FLUSH

Term

NEUROLOGIC AND PARALYTIC

 

SHELLFISH POISONING

 

BIVALVES

Definition

BREVETOXINS

(heat stable!)   1-3 hr incubation     24-72h duration

parasthesia, mouth numbness and tingling of mouth & extrem.

GI upset

 

SAXITOXINS

(heat stable!)   1-3 hr incubation     24-72h duration

parasthesia, mouth numbness and tingling of mouth & extrem.

ATAXIA, can go to RESP PARALYSIS 

Term

 

Escherichia coli

 

ETEC

Definition
  •  
    • TRAVELLER's diarrhea
    • N+V   NO FEVER
    • 2 ENTEROTOXINS
    • LT (adenylate cyclase--> up cAMP     AB toxin
    • ST (guanylate cyclase) --> up cGMP  AB toxin
    • Colonizes villi and releases toxin (2-stage)
    • Tx-->NO ANTIBIOTIX
Term

 

EPEC

Definition
  • INFANTILE DIARRHOEA
  • 50% mortality in developing countries
  • Bundle Forming Pilus
    • attach to villi
    • Erode 'em-- reduce absorption--> watery diarrhea
  • TX: rehydrate + ANTIBIOTICS (trimethoprim)
Term

 

Vibrio Cholerae

Definition
  • Curved G-rod non-spore, MOTILE, Oxidase +
  • O and H antigens   O1 and O139
  • Ferment sucrose and mannose NOT arabinose
  • ACID SENSITIVE  (food protects in gut)
  • AB toxin (like ETEC)
  • RICE WATER STOOL
  • TX: rehydrate + tetracycline
  • In USA, from TRAVELLERS from infected areas
Term

 

 

 

Clostridium perfringens

Definition
  • 2 different Dzs
    • necrotic enteritis (Pig-Bel Dambrand, type C)
    • Type A foodborne infection 
  • MEAT
    • Cook--> spores -->cool-->vegitative-->Endotoxin A
  • 8-24h incubate, watery Drha, N&V, SEVERE abdom. pain,
  • Monitor elderly and imm. comp Pts
  • Large vegitative cells in Feces
Term

 

 

 

Bacillus cereus

Definition
  1. diarrhoea + abdominal pain 8-16 / 12/24h
  2. Meat, VEGETABLEs, sauces, pasta, desserts, dairy
  3. LT ENTEROTOXIN  -- incr cAMP
  4. two modes!
    1. Food poison < 4 hr ST ENTERIC toxin  Vomit
    2. 8-16h Enterotoxin  Water diarrhea   LT protein
Term

Compare

 

B. cereus

 

food poison vs. foodborne infections

Definition

Food poisoning                             Foodborne infection

 

> short incubation                             longer incubation

> within 4 hrs                                    8-16 hrs

> Emetic toxin                                  Enterotoxin


> Vomit                                            Watery diarrhoea

   - ST neurotoxin                                -LT protein

Term

 

 

ROTAVIRUS

Definition

REOvirus  (Respiratory Enteric Orphan)

Wheel shape        Non-envelope    11 segments   dsRNA

 10 human serotypes


6 mo< ASYMPTOMATIC > 5 yrs      

48 hrs / up to 6d     Shed in feces for 10d

Only Cholera has severity + freq. of diarrhea

W & w/o vomit

Vaccines

Term

 

 

NORWALK VIRUS

 

(Norovirus)

Definition
  • smal, non-enveloped,  +ssRNA
  • 50% of non-bacterial gastroenteritis in US
  • OLDER kids and ADULTS
  • "WINTER VOMIT DISEASE"
  • Fecal-oral                  
  • Small intestine
  • 24-48    / 24-60h
  • RT-PCR required to ID       FOOD HANDLERS


Term

 

Adenoviruses

Definition
  • Icosohedral dsDNA    12 vertices  PENTONS   
  • 2 serotypes 40, 41 (group F)
  • RESPIRATORY TRACT     5-15% DIARRHOEA
  • 2ND to Rotavirus
Term

 

 

 

ASTROVIRUSES

Definition
  • diarrhoea in Scotland
  • small, non-enveloped   +ssRNA
  • 3rd to Rota   Peak in Winter 
Term

 

 

Hepatitis A

 

virus

Definition
  • icosohedral, non-enveloped, +RNA
  • Feal-oral    (fruit pickers)
  • endemic in Africa, S. Europe
  • F+N+V--> subsides --> jaundice --> 1-3 wks, 3rd degree
Term

 

Hepatitis E

 

Virus

Non A Non-B

Definition
Term

 

 

List the Shigella species in order of virulence

Definition

MOST VIRULENT

 

Group A:  S. dysenteriae

Group B: S. flexneri

Group C: S. boydii

Group D:  S. sonnei

 

LEAST VIRULENT

Term

 

SHIGELLA VIRULENCE FACTORS

Definition

 

Endotoxin (O antigen)

Exotoxin:  neurotoxic enterotoxin

 

NAD glycohydrolase
destroys all NAD in cells --> shuts dn metab --> death

Term

Difference between symptoms

 

of

 

S. flexneri vs. S. sonnei

 

Definition

 

S. flexneri:  Stool mucus and blood

 

S. sonnei:  watery diarrhea, Vomit

 

Term

 

Enteroinvasive E. coli

 

(EIEC)

Definition

 

  • Similar to Shigellosis - less severe - no enterotoxin, no cytotoxin
  • Infective dose 10 organisms !
  • INVASION of LARGE INTESTINE
  • Kills enterocytes--> WBCs, RBCs and mucosal cells in stool
Term

 

 

Salmonella species

Definition
  • Ubiquitous
  • 3 types of clinical manifestations
    • Gastroenteritis : S. typhimurium, enteritidis, Newport
    • Septicemia/bacteremia (rare) S. cholerasuls
    • Enteric (Typhoid fever):  S. typhi
Term

 

 

Salmonella

Entercolitis

(Gasteroenteritis)

Definition

FOOD-BORNE

 

Localized infection

Excessive fluid secretion from ileum and jejunum

 

PB, fresh produce, alfalfa sprouts, milk

REPTILES

Term

 

 

Enteric Fever

Definition

S. typhi

 

US ONLY see in travellers to Asia, Mexico, India

S. paratyphi B

Motile

G- rod

H2S production

Gas from glucose

Serotyping

Term

 

 

Typhoid Fever Dx

Definition
  1. Travel to infected areas (Mexico, Asia, India)
  2. Rose coloured spots on abdomen (2-4d)
  3. Examination of blood (anemia, leukopenia, no PMNs)
  4. Positive Widal reaction (agglutination of O, H antigens)
Term

 

Campylobacter spp.

 

(C. ejuni, doylei, coli, lari, hyointestinalis)

Definition

Small curved spiral RODS

G-

Cat+

No spores

Motile (single polar flagella)

Zoonotic:  poultry, sheep, cats, dogs

Microaerophilic:  can't grow aerobic or anerobic

fecal contam of food, water

Term

 

 

Campylobacter Sx

Definition
  1. 3-5d after ingest                           ASSOC W/ GUILLAIN-BARRE
  2. Vomit                                           ascending paralysis
  3. Diarrhea (profuse (green?)
  4. Ab pain
  5. Prosration
  6. Pyrexia
  7. Bloodstained feces
  8. ERYC Tx
Term

 

Yersinia enterocolytica

Definition

YERSINOSIS

Y. pseudotuberculosis

 

Kids < 7, adults

Acute gastroenteritis

Cooler climates

1-40 deg (psychrotroph)

HEAT STABLE ENTEROTOXIN INCR. cGMP

Term

 

Yersinia enerocolytica

 

Sx,Dx, Tx

Definition

3-7d / 14-21d

abdominal pain

watery diarrhea

doxycycline or oxytetracycline

 

ASSOC W/RA (?)  T-cell stimulation ???

Stool, MacConkey - pinpoint colonies/special Yersinia media

Term

 

Vibrio vulnificus

Definition

Diarrhea  and infection of cuts

(SALT WATER ABRASIONS)

SUSHI IN JAPAN:  major

Intense skin lesions and gasteroenteritis

stool, TC BS agar, Sucrose -

Term

Enteroaggregative E. Coli

 

EAEC

Definition

No EAF (Enteric Adherence factor- pilli)

 

AAF:  Aggregative Adherence Factor- close attach

 

  1. Initial addherance to mucosa
  2. Enhanced mucus production--> BIOFILM
  3. Cytotoxin?
Term

 

ENTEROHAEMORRHAGIC E. coli

 

VTEC

STEC

Definition

VTEC - VEROTOXIN-producing

do not give abiotix - more toxin released

ETEC - SHIGATOXIN -producing

Life-threatening hemorrhagic colitis/uremic snd

  1. Acute renal failure
  2. Thrombocytopenia
  3. Microangiopathic hemolytic anemia
  4. THROMBOTIC THROMBOCYTOPENIA PUPURA
Term

 

VTEC

Pathogenosis

Definition

CYTOTOXIN - VEROTOXIN

 

2 types, VT1, VT2, SHIGA-like toxin

(rRNA) blocks protein synthesis and kills cell

A subunit --> renal epithelium via circulation

 

do NOT give antibiotics- kills 'em --> release more toxin

Term

Dx

 

E. coli

Definition

MacConkey Agar results

RED (lactose fermenters)

   E.coli   Klebsiella   Emterobacter

 

NOT RED (neg)

Oxidase (-)    Glucose + -->  Proteus, Salmonella, Shigella

Oxidase (+) G+ --> Pseudomonas, campylobacer

Oxidase (+) G- --> vibrio

 

Term

 

 

C. diff

Definition

Nosocomial

Antibiotic-associated, esp. CLINDAMYCIN, AMOXICILLIN

 

2 toxins: 

A: enterotoxin (fluid accum. in bowel, weak)

B: potent - decr. cell protein synth and disrupts microfilaments

Very mild watery diarrhea, hypo-albumin, leukocytosis

need scope to show

discontinue antibiotic

Term

 

H. pylori

 

Definition

G-

no spore

Curve

motile - polar 5-6 flagella

Microaerophilic  2-5% O2, 5-10% CO2

Cat+

Urease+  (lets live in low pH!)

coccoidal under culture

Term

 

Diseases

of

 

H. pylori

Definition

 

Gastriis

Duodenal ulcers

Gastric ulcer

Gastric cancer

Term

 

H. pylori

 

Tx

Definition

 

1.  Triple regimen bismuth salt, metronidazole,

tetra or amox

 

2. Acid supressors (omerprazole) heals ulcer

Amoxicillin

3. Proton pump inhibitor + metronidazole or trinidazole + clarithromicin (macrolide)

Term

 

Chron's Dz

 

Regional enteritis

IBD

 

Definition

M. paratuberculosis

(just like chron's but no abdominal pain)

 

Bovine Johne's Dz

Obligate intracellular, acid fast rod

NOT UNIVERSALLY EFFECIVE ANTIMICROBIAL

 

Term

 

ANTIMICROBIAL THERAPY

Definition

METRANIDAZOLE- all Bacterioides

Gentamycin/tobramycin/amikacin: useful

Clindamycin:  60% bacterioides spp

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