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Micro CH 8
Gene Transfer & Genetic Engineering
78
Biology
Undergraduate 2
03/01/2011

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Term
What is the difference in gene transfer in eukaryotes vs. prokaryotes?
Definition
-in eukaryotes it is an essential part of life (sexual reproduction)
-in prokaryotes it is not essential (occurs either through binary fission or transduction, conjugation, transformation)
Term
gene transfer
Definition
movement of genetic information between organisms
Term
recombination
Definition
combining of genes from 2 different cells, increases genetic diversity
Term
What are the 2 types of gene transfer?
Definition
1. vertical gene transfer (sexual reproduction, binary fission)
2. lateral/horizontal gene transfer-transformation, conjugation, transduction
Term
Vertical gene transfer
Definition
genes are passed from parents to offspring
Term
lateral (horizontal) gene transfer
Definition
genes are passed to other microbes from the same generation
Term
3 methods of horizontal gene transfer
Definition
transformation, transduction, conjugation
Term
transformation
Definition
change in an organism's characteristics through transfer of naked DNA
Term
Griffith's Experiment with Pneumococci
Definition
-1928
-studied 2 types: encapsulated, virulent (S type) and not encapsulated, nonvirulent (R type)
-discovered that if the nonvirulent strain was mixed with heat killed virulent strains and injected into mice, the mice would die
-showed that naked DNA was taken up my nonvirulent cells and transformed into virulent cells
Term
Avery, MacLeod, McCarty experiment
Definition
-1944
-discovered the substance responsible for transformation is DNA
Term
competent
Definition
ability of a cell to take up naked DNA
Term
How are some ways that cells become competent?
Definition
naturally, chemically induced, heat shock
Term
competence factor
Definition
protein released which facilitates entry of DNA into bacteria
Term
exonucleases
Definition
cut double stranded naked DNA into smaller pieces (7,000-10,000 nucleotides) for entrance into cells
Term
Does double or single stranded DNA enter the cell for transformation?
Definition
single-stranded DNA
Term
What is the significance of transformation?
Definition
-rarely seen in nature, probably following breakdown of dead organisms
-can be used in lab to study locations of genes on chromosomes
-can be used to produce recombinant DNA
Term
tranduction
Definition
transfer of DNA from 1 bacterium to another via a bacteriophage
Term
Who discovered transduction and in what year?
Definition
-Joshua Lederberg & Norton Zinder
-1952
Term
structure of a bacteriophage
Definition
core of nucleic acid and protein coat
Term
What are the 2 types of bacteriophages?
Definition
virulent & temperate
Term
virulent phage
Definition
capable of causing infection & death of cell
-follows lytic cycle
Term
lytic cycle
Definition
sequence of events in which a bacteriophage infects a bacterial cell, replicates, and eventually causes lysis of the cell
Term
temperate phage
Definition
phage that ordinarily does not cause a disruptive infection
-phage is incorporated in bacterial DNA and replicated (prophage)
-follows lysogenic cycle
Term
temperate phage
Definition
phage that ordinarily does not cause a disruptive infection
-phage is incorporated in bacterial DNA and replicated (prophage)
-lysogenic although can eventually become lytic
Term
prophage
Definition
the DNA of a lysogenic phage that has integrated into the host cell chromosome
Term
lysogeny
Definition
ability of temperate bacteriophages to persist in a bacterium by the integration of viral DNA into the host chromosome and without the replication of new viruses or cell lysis
Term
specialized transduction
Definition
transduction in which the phage particle transduces specific genes from one bacterial cell to another
-bacterial DNA transduced is limited to one or a few genes lying adjacent to the prophage
Term
generalized transduction
Definition
transduction in which each bacterial fragment from the host cell has an equal chance of accidentally becoming part of phage particles during phage's replication, and then transfered to new bacteria
Term
What is the significance of transduction?
Definition
-allows bacterial cells to acquire new/variable traits
-provides way to study gene linkage
-shows close evolutionary relationship b/w prophage & host
-prophage in host cell suggests possible similar mechanism for viral origin of cancer
Term
conjugation
Definition
transfer of genetic info from one bacterial cell to another by means of conjugation pili
Term
How does conjugation differ from transduction and transformation?
Definition
-requires direct contact between donor & recipient
-transfers larger amounts of DNA
Term
Who discovered conjugation and in what year?
Definition
Joshua Lederberg
-1946
Term
Lederberg's experiment for conjugation
Definition
-used 2 different auxotrophic E. coli strains, would not grow on minimal media
-mixed the 2 strains and then some grew on the minimal media, had acquired the ability to synthesize substances needed
-showed that conjugation had occurred & genes were shared
Term
What are the 3 methods for conjugation?
Definition
1. F+ with F-
2. Hfr with F-
3. F' with F-
Term
F+ cells
Definition
cells that contain the fertility plasmid
Term
Hfr strain
Definition
strain of F+ in which the F plasmid is incorporated into the bacterial chromosome
Term
F' plasmids
Definition
F plasmid that has been imprecisely separated from the bacterial chromosome and so it carries a fragment of the bacterial chromosome
Term
What does an F+ cell and an F- cell make?
Definition
all F+ cells
Term
What is transferred when an F+ cell and an F- conjugate?
Definition
the F plasmid
Term
What is transferred when an HFr and F- cell conjugate?
Definition
the initiating segment of F plasmid and variable quantity of chromosomal DNA
Term
What does conjugation between Hfr and F- result in?
Definition
an F- cell with variable quantity of chromosomal DNA
Term
What is transferred during conjugation between an F' cell and a F- cell?
Definition
F' plasmid and some chromosomal genes it carries with it
Term
What is the product of conjugation between F' and F- cells?
Definition
F' cell with some duplicate gene pairs; one on chromosome, one on plasmid
Term
What is the significance of conjugation?
Definition
-important in creating genetic diversity b/c large amount of DNA transferred
-linear transfer useful in chromosome mapping
Term
What is the significance of conjugation?
Definition
-important in creating genetic diversity b/c large amount of DNA transferred
-linear transfer useful in chromosome mapping
Term
promiscuous bacteria
Definition
bacteria that have the ability to form F pilus and transfer into species other than their own kind, sometimes even eukaryotes
Term
resistance plasmids
Definition
plasmids that carry genes that provide resistance to various antibiotics or toxic metals
Term
What are the 2 components of resistance plasmids?
Definition
-resistance transfer factor
-resistance genes
Term
resistance transfer factor
Definition
component of resistant plasmids that implements transfer of resistance genes by conjugation of the plasmid
Term
resistance genes
Definition
component of resistance plasmids that confer resistance to various antibiotics or toxic metals
Term
displacins
Definition
pieces of DNA isolated from soil bacteria and attached to harmless E. coli in order to displace plasmids with harmful genes, leaving the pathogens now harmless
Term
Why are displacins a better solution than antibiotics?
Definition
because displacins do not produce the "vacuum effect" that antibiotics do, rather they displace bacterial plasmids instead of destroying bacteria
Term
transposition
Definition
ability of genetic sequence to move from one location to another
Term
transposable element
Definition
mobile genetic sequence
Term
What does an insertion sequence contain?
Definition
-gene that codes for enzymes needed for transposition
-surrounded on either side by inverted repeats
Term
What is the simplest type of transposable element?
Definition
insertion sequence
Term
What does a transposon contain?
Definition
-genes that code for enzymes needed for transposition
-also one or more other genes (toxic production or R genes)
Term
How can transposons disrupt gene function?
Definition
by randomly inserting itself into bacterial chromosome or another plasmid, however usually it inserts BETWEEN genes rather than within
Term
Barbara McClintock
Definition
Won Nobel Prize for work on transposons, using corn
-1983
Term
Andre Gratia
Definition
Belgian scientist, observe that some strains of E. coli release protein that inhibits growth of other strains of E. coli-->colicins/bacteriocins
-1925
Term
colicins<-->bacteriocins
Definition
proteins released by certain bacteria that inhibit growth in other strains of the same species or closely related species
Term
bacteriocinogen
Definition
plasmid that directs production of a bacteriocin
Term
What are some various mechanisms by which bacteriocins inhibit growth of other strains of same bacteria/closely related species of bacteria?
Definition
-can enter bacterial cell and destroy DNA
-can arrest protein synthesis by disrupting ribosome structure
-can inhibit active transport or increase membrane permeability
Term
What are some various mechanisms by which bacteriocins inhibit growth of other strains of same bacteria/closely related species of bacteria?
Definition
-can enter bacterial cell and destroy DNA
-can arrest protein synthesis by disrupting ribosome structure
-can inhibit active transport or increase membrane permeability
Term
genetic engineering
Definition
purposeful manipulation of genetic material to alter the characteristics of an organism in a desired way
Term
What are the 6 different types/functions of plasmids?
Definition
1. F (fertility) plasmid-direct synthesis of proteins for conjugation pili
2. R (resistance) plasmids-carry genes for antibiotic resistance
3. Bacteriocinogens-direct synthesis of bacteriocins
4. virulence plasmids-cause disease signs/symptoms
5. tumor-inducing plasmids-cause tumor formation in plants
6. plasmids for catabolism-contain genes for catabolic enzymes
Term
What are the effects of transformation?
Definition
-transfers less than 1% of cell DNA
-requires competence factor
Term
What are the effects of transduction in general?
specialized?
generalized?
Definition
transduction-transfer is effected by bacteriophage
specialized-only genes near prophage are transfered
generalized-fragments of host DNA of various lengths & numbers are packaged in viral head
Term
What are the effects of conjugation?
F+ conjugation?
HFr conjugation?
F' conjugation?
Definition
conjugation-transfer is effected by a plasmid
F+-a single plasmid is transfered
HFr-an initiating segment of a plasmid and a linear sequence of bacterial DNA that follows the initiating sequence are transferred
F'-a plasmid and whatever bacterial genes that adhere to it when it leaves the bacterial DNA are transferred
Term
genetic fusion
Definition
type of genetic engineering that involves the coupling of genes from 2 different operons so that both genes are regulated under 1 operon, saves time, done in lab only
Term
protoplast fusion
Definition
-type of genetic engineering
-cell wall is gone & two different strains of the same species fuse & genetic recombination is forced, occurs in nature but protoplast fusion greatly increased the rate at which is happens
-
Term
gene amplification
Definition
-type of genetic engineering
-plasmids or bacteriophages carrying a specific gene are induced to reproduce at a rapid rate inside the host cell
Term
Recombinant DNA
Definition
-DNA that contains information from 2 different species, one of most useful techniques of genetic engineering
Term
transgenic
Definition
state of permanently changing an organism's characteristics by integrating foreign DNA (genes) into the organism
Term
What are the 3 processes involved in making recombinant DNA?
Definition
-manipulation of DNA in vitro (outside cells)
-recombination of another organism's DNA with bacterial DNA in a phage or a plasmid
-the cloning, or production of many genetically identical progeny, or phages or plasmids that carry foreign DNA
Term
vector
Definition
a self-replicating carrier of DNA; usually a plasmid, bacteriophage, or eukaryotic virus
Term
hybridoma
Definition
a hybrid cell resulting from the fusion of a cancer cell with another cell, usually an antibody-producing white blood cell
Term
monoclonal antibody
Definition
a single, pure antibody produced in the laboratory by a clone of cultured hybridoma cells
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