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MCB 2050 Application of Mol. Gen. 2
human gene therapy, transgenic animals & plants, genetic control of animal development
45
Biology
Undergraduate 2
04/01/2014

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Term
What is a transgene?
Definition
a gene that is introduced into an organism
Term
Does human gene therapy refer to germline or non-germline cells?
Definition
non-germline
Term
What are some common vehicles for delivering transgenes?
Definition
-viruses (adenovirus, retrovirus, herpesvirus)
-liposome
Term
What are liposomes?
Definition
lipid-coated artificially created vesicles which are fused with cell membranes to introduce a transgene
Term
What is a risk in the introduction of a virus into an existing genome?
Definition
-no control over how the introduced virus & genetic information will be incorporated
-may interfere or mutate highly conserved genes, causing cancer among other issues
Term
What is ADA-SCID?
Definition
Adenosine deaminase-deficient Severe Combined Immunodeficiency Disease

-lack of functional B & T cells (no immune response)
Term
Describe the steps involved in the gene therapy treatment of ADA-SCID
Definition
1. Isolate bone marrow stem cells from patient
2. Infect bone marrow with IL2RyC+ retroviral vector
3. Grow cells in culture & verify expression of the gene
4. Infuse stem cell transgene into patient
5. Success means that the IL2RyC+ protein will restore production of functional WBCs
Term
What is the common use of recombinant protein production technology?
Definition
to produce pharmaceuticals
e.g. human insulin, human growth hormone
Term
What are some common uses of transgenic animal?
Definition
-study gene function
-produce new products
-model systems for human diseases or crop plants
Term
True or False

The generation of transgenic animals & transgenic plants follow similar processes
Definition
false
Term
What does the oocyte contribute to zygote formation? The sperm?
Definition
Oocyte
-haploid genome
-proteins & maternal RNA
-nutrients

Sperm
-haploid genome
Term
At what stage is the fate of cells determined in animal development?
Definition
at the blastula stage
Term
What is gastrulation?
Definition
cell division & migration after the blastula stage
Term
What are the characteristics of model organisms?
Definition
-short life cycles
-small adult size
-readily available
-easily accessible for genetic/other experimental manipulations
Term
Why can we use fruit flies to study genetic mutations in other animals?
Definition
homologous genes are genes which share common ancestry; many Drosophila genes are homologous to those in other species
Term
What are the two major classes of genes controlling drosophila embryonic development?
Definition
Maternal-Effect genes
-effect the next generation only
-affect egg formation

Zygotic Genes
-biparental genes
-activated by maternal-effect genes, after fertilization
-embryonic mutations are lethal
Term
What determines bilateral symmetry axes, and when?
Definition
-RNAs deposited during oogenesis, established very early in development
-maternal effect genes!
Term
Steps of establishing an anterior-posterior axis in Drosophila in relation to the hunchback, bicoid, caudal & nanos genes
Definition
1. RNA for all 4 genes is deposited into the oocyte.
2. Hunchback & caudal are distributed uniformly, bicoid at anterior end and nanos at posterior.
3. Local translation of bicoid & nanos & diffusion of the proteins produced to form gradients.
4. Bicoid prevents translation of caudal RNA in anterior end, nanos prevents hunchback in posterior
5. Hunchback translated at anterior end, caudal is translated in posterior end
6. Hunchback & bicoid proteins act as transcription factors to regulate differentiation of anterior region, caudal proteins regulate differentiation of posterior region.
Term
What is the importance of gradients of maternal-effect gene products?
Definition
provides cells with positional information along the anterior/posterior axis during embryo development
Term
Is body segmentation controlled by zygotic or maternal-effect genes?
Definition
zygotic
Term
What are gap genes, what region of the body do they affect and how are they controlled?
Definition
Gap Genes
-zygotic genes
-affect a large region of the body
-encode transcription factors with zinc-finger motif
-controlled by maternal-effect genes
Term
If a drosophila has multiple continuous segments of their body missing, what type of gene is likely mutated?
Definition
a gap gene
Term
If a drosophila is missing half of the parasegments of its body, what type of gene is likely mutated?
Definition
a pair-rule gene
Term
If a drosophila has one half of a segment of its body replaced by the other half of the same segment, what type of gene is likely mutated?
Definition
a segment-polarity gene
Term
If a drosophila has one segment of their body transformed into another, what type of gene is likely mutated?
Definition
a selector gene/homeotic gene
Term
What are pair-rule genes, what region of the body do they affect and how are they controlled?
Definition
Pair-Rule genes
-zygotic genes
-affect smaller domains of the body, alternating every other segment
-encode transcription factors with helix-turn-helix motif
-controlled by gap genes
Term
What are selector/homeostatic genes, what region of the body do they affect and how are they controlled?
Definition
-determine adult structures to be formed by each segment
-encode transcription factors with a homeodomain (helix-turn-helix)
-controlled by segmentation genes
Term
What are segment polarity genes, what region of the body do they affect and how are they controlled?
Definition
Segment Polarity Genes
-affect small domains within a segment
-controlled by pair-rule genes
Term
Describe the cascade steps of gene expression which produces segmentation in Drosophila embryos
Definition

1. Maternal effect genes establish anterior/posteior polarity

2. Gap genes subdivide embryo into broad zones

3. Pair-rule genes are expressed in 14 bands along A/P axis

4. Segment-polarity genes are expressed in each subsegment along the A/P axis

5. Homeotic genes are expressed in specific regions along the A/P axis

Term
What happens if the Sev gene of drosophila is mutated? (sevenless)
Definition
R7 photoreceptor in the eye differentiates into cone cells instead of neurons
Term
What is the relationship between R7 & R8 photoreceptors, to correct a 'sev' mutation?
Definition
-Sev gene encodes a receptor which can only be activated by binding to a ligand on R8 -R8 signal is relayed into R7 nucleus, initiating a cascade of gene expression/repression -R7 differentiates into a neuron (photoreceptor cell)
Term
Explain colinearity, using insect HOM genes and vertebrate Hox genes as an example
Definition
-various HOM & Hox genes are positioned on a chromosome in order of when & were they will be expressed in the body
Term
What are the steps involved in generating transgenic mice by microinjecting DNA into fertilized eggs?
Definition
1. Inject DNA into nucleus of a zygote
2. Implant zygote into a pregnant mouse
3. Examine offspring for presence of the gene your injected to ID the transgenic mice
Term
What are the steps involved in generating transgenic mice by embryonic stem cell technology?
Definition
1. Mate true-breeding dark-coloured mice & obtain embryos at blastocyst stage
2. Culture embryonic stem cells from the blastocyst
3. Swamp the endogenous gene with the transgene you want to introduce, with a marker so you can identify it.
4. Inject the transfectd ES cell into blastocyst from light-coloured parents
5. Implant the blastocyst in a pseudopregnant female
6. Mate chimeric offspring from this female to a light-coloured mouse
7. Examine DNA from dark offspring of this final mating for the DNA marker sequence you inserted (these will be transgenic)
Term
What are the genetic advantages of the EnvironPig?
Definition
-genetically modified to secrete phytase, which digests plant phytate phosphorous & will reduce environmental PO4(3-) pollution from pigs' feces
Term
What does 'totipotent' mean?
Definition
An entire organism can be regenerated from a single somatic cell
Term
What is a Ti plasmid? What are its components?
Definition
Tumour-inducing Plasmid, found in soil bacteria

T-DNA: transposable element that carries genes which cause plant tumours

Virulence region: carries genes which integrate T-DNA into plant genome
Term
How can you produce transgenic plants using a Ti plasmid?
Definition
1. Isolate the genetic sequence you want to introduce & plasmid from a bacterium
2. Insert this gene into the Ti plasmid
3. Insert recombinant Ti plasmid back into the bacterium
4. Introduce bacterium to soil of the plant you want to affect
5. Bacterium will transfer the Ti plasmid into plant chromosome & translation of the inserted genes will occur
Term
What are some concerns about genetically modified foods?
Definition
-safety to human health, development of allergies
-increased herbicide use on herbicide-resistant crops
-reduced biodiversity
-accidental introduction of the transgene into other related species in the ecosystem
Term
What is The Golden Rice Project?
Definition
-development of rice which produces beta-carotene, a precursor of Vit A, to address a global Vit A deficiency problem
Term
What is Nuclear Transfer?
Definition
Artificial construction of a zygote

-removing a nucleus from an egg & inserting a nucleus from an adult cell
Term
What are some challenges of epigenetic reprogramming?
Definition
-genomic imprinting
-inactivation of X chromosomes
-maintenance of telomeres (preventing DNA degradation)
Term
What is the master gene of eye development?
Definition
eyeless gene
Term

True or False

Expression of the mouse Small Eye gene will cause formation of extra eyes in Drosophila

Definition
True
Term
Is establishment of bilateral axes of symmetry controlled by zygotic or maternal effect genes?
Definition
maternal effect
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