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Lectures 16-30
Exam 2
132
Biology
Undergraduate 2
03/15/2010

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Term

homeosis

 

Definition
The replacement of one organ by another
Term
Antennipedia
Definition
Antennae are replaced by (2nd) legs
Term
Ultrabithrorax
Definition
halteres (vestigial wings) are replaced by normal wings
Term
homeodomain
Definition
The proteins coded for by specific genes which share a common DNA binding region of about 60 aminio acids
Term
homeobox
Definition

a DNA base sequence which the homeodomain is specified

(hox genes)

have variable regions near thier homeodomains, which allow them to bind and to regulate the enhancers of different genes, and therfore control the development of different structures

Term
Modular
Definition
The modules (segments of genes) are all transmitted by the germ line; therse modules are peiced together during the development of the effector cells
Term
mast cells
Definition
contribute to inflammatory response
Term
eosinophils
Definition
release toxins that kill parasites
Term
cytokines
Definition

signaling molecules

primarily macrophages and histamine

Term
cytokines cause major:
Definition

1. dilation and increased permeability of blood vessels

2. invasion of macrophages and especially neutrophils from the capillaries into the tiessue

3. activation of natural killer cells

Term
interferons
Definition
interferes with spread of viruses by inducing neighboring uninfected cells to undergo molecular changes that will inhibit viral replication
Term
B- lympocytes
Definition

mature in bone marrow

produce b cell receptors (cell membrane bound)--> circulating antibodies

interact with antigens encountered in the circulation

Term
T-lymphocytes
Definition
mature in the thymus (produced in bone) produce t-cell receptors (cell membrane bound) interact with antigens presented by other cells
Term
immunoglobulins
Definition

the circulatiing antibody molecules (liberated b-cell receptors) secreted by teh b-lymphocytes and make up 20% of the proteins in the blood plasma

4 chains: 2 identical light  chains and 2 identical heavy chains bound together by S-S links

Term
opsonization
Definition
coating the surface of bacteria making them tastier for macrophages
Term
neurtralization
Definition
caoting of free virus preventing them from binding to host cells
Term
complement
Definition
assembly and activation of blood proteins
Term
IgM
Definition
(~10% of Ig's) produced early, cross-linked, very effective in complement activation
Term
IgG
Definition
(~75%) most abudnat, very effective in bacterial opsonization, viral and toxin neutralization
Term
IgA
Definition
(~15) presnt on epithelial surfaces, esp, in gut, where it neutralizes viruses and toxins.  Also secreted in mother's milk, provides passive immunity to newborn
Term
IgE
Definition
(~<<1%) stem binds to the surface of mast cells, causing release of histamine upon binding to antigen
Term
IgD
Definition
(~<1%) plays a role in maturation of B lymphocytes- has no other fuction
Term
the instructive theory
Definition

antibodies "made to order"

the antigen itself serves as a template for the construction of the antibody, which therefore is "made to order"

Term
clonal-selection theory
Definition

antibodies "ready made"

a casty arroy of naive b-lymphocytes making b cell receptors with different antigen-combining sites exits before exposure to antigens (ready made)

Term
Helper T-lymphocytes
Definition
interact with the other mail players of the immune systerm in order to "licsense them to carry out thier fucntions
Term
cytotoxic t-lymphocytes
Definition
kill cells infected with viruses and other interacellular parasites (also mediate transplant rejection) different from natural killer cells
Term
 3 types of antigen-presenting cells (APCs)
Definition

dendritic cells

macrophages

b-lymphocytes

Term
dendritic cells
Definition
the principal APCs. found all over the body, esecially in the skin and mucous membranes; pick up antigens and transport them to the lymph nodes
Term
macrophages
Definition
specialized to take up and present antigens from bacteria
Term
B-lymphocytes
Definition
specialized to present soluble antigens
Term
Class II MHC
Definition
molecules are produced only by antigen-presenting cells
Term
class I MHC
Definition
MHC molecultes are produced by almost all nucleated cells, and can display bits of viruses or other infecting organisms
Term
ecology
Definition

the study of the limits of the distribution and abundance of organisms

The interactions between organisms and thier environment

Term
individual level of ecology
Definition
adaptation to environment
Term
population level of ecology
Definition
sets of individuals that are interactive in the same location
Term
community level of ecology
Definition
sets of species which occupy the same range
Term
ecosystem level of ecology
Definition
community and physical environment
Term
Rates of increase
Definition
how fast is it growing
Term
survivorship
Definition

probability of living to age "X"- average

 

Term
age structure
Definition
number of individuals at a certain age
Term
dispersion
Definition
pattern in space
Term
per-individual (per capita) rate of reproduction
Definition

r=b-d

r-the per-individual rate of reproduction

b-birth

d-death

Term
population rate of growth
Definition
dN/dt=rN
Term
generation time
Definition
time from birth to reproduction
Term
Type I curve
Definition

"physiological" survivorship curves

cases where the probability of survival is high until an organism is old

found it best possible environments and in species with high investment in individual juviniles

Term
Type II Curves
Definition

exponential survivorship curves occur when the probability of death is random over all ages

a constant fraction (1-d) survive in each time interval

Term
Type III Curves
Definition

"hyperbolic" curves are typical when birth and juvenile death are both high

sessile organisms with many small planktonic larvae show type III survival

the probability of survival is much higher in adults than in larvae

Term
limit
Definition

keep population from increasing

independent and dependent

Term
regulation
Definition
keeping things in a particular balance
Term
density independent effects
Definition

physical evnironment-weather, fire, avalanche

huge random variation occurs because of weather

Term
density dependent effects
Definition
disease, food competition, prob of effected depends on number of neighbors a species has
Term
negative density-dependent effects
Definition
have the greatest effect on dense populations
Term
habitat
Definition
tempterature, humitity, what organisms are exposed to relative environment dont effect each other
Term
resources
Definition
water, minerals, used, used up
Term
phenotypic plascity
Definition
adaptive to environment, ability to respond to different environmental circumstances
Term
innate behavior
Definition
one that is expresed without prior experience, makes correct response. gets behavior due to gentetic effects.  changes in behabior due to gene differences
Term
historical effects
Definition
limitations of ancestry.  ancestors of animal behaved that way. ie.e reptile ancestor to dog and bird, reptile scratched that way. 
Term
fixed action pattern (FAP)
Definition

orientation

hooking

retrieval

Term
sensitive period
Definition
period when learning had taken place
Term
exponential growth
Definition

population increase under ideal conditions, free to reproduce to capacity

dN/dt=rN

N= number of animals in species

t=time

delta N= change in population size

delta t= time interval

d= per capita death rate- allows us to calculate the expected number of deaths per unit time in a population sof any size

r=rate- whether a population is growing or declining

j-shape graph

 

Term
logistic growth
Definition

reff=r(1-N/K)

r=rate

N= number of animals in species

K=carrying capacity

per capita rate of increase approaches zero as the carrying capacity is reached

s-shaped graph

Term
per capita rate of increase (logistic)
Definition
rmax(K-N/K)
Term
Population growth rate
Definition
rmaxN(K-N/K)
Term

rate of population growth

 

equals

 

(exponential growth)-(logistic growth2/Carrying Capacity)

Definition

dN/dt

 

dN/dt=rN-rN2/K

Term
general population growth model
Definition
r=b-d
Term
deviance from K
Definition

dN/dt=r(1-N/K)N

 

The more the rate deviates from K, the more likely it is to return to K. 

Term
simpson's index for community species of diversity
Definition

D=

(#species/100)2 then add up total of species then

1/total

Term
acclimation (acclimatization): 
Definition

adaptive physiological adjustment to a change in environment, such as increase in resting metabolic rates in endotherms during winter.

Term
ecological niche
Definition
the sum of a species' use of the biotic and abiotic resources in its environment
Term
realized niche
Definition
niche that is actually occupied
Term
niche
Definition

how an organism fits into the ecosystem

the organisms "profession"

Term
net primary production
Definition
equal to gross primary production minus the energry used by the primary producers for resperation
Term
secondary production
Definition
the amount of chemical energy in consumers' food that is converted to their own new biomass during a given time period
Term
production efficiency
Definition

net secondary production is the energy stored in biomass represented by growth and reproduction.  assimilation consists of the total energy take in and used for growth, reproduction, and respiration.  It is therefore the percentage of energy stored in assimilated food that is NOT used from respiration

production efficiency=net secondary production/assimilation of primary production X100%

Term
trophic efficiency
Definition
the percentage of production transferred from one trophic level to the next
Term
adaptation
Definition

a phenotypic feature that contributes to fitness (see ‘fitness’) in a given environment. 

Term
Allee effects
Definition

situations in which individuals have higher fitness in  dense as compared to sparse populations.

Term
allelopathy
Definition

inhibition of a competitor by chemical means.  For example, the bread mold fungus produces penicillin to inhibit bacterial competitors.

Term
allopatric
Definition
 populations found in different geographic ranges (e.g. on different islands).
Term
aposematic
Definition

has a conspicuous signal (e.g. color pattern) as a warning of noxious and/or dangerous qualities.  The rattlesnake’s buzz is an aposematic signal.

Term
assimilation
Definition

digestion and absorption by cells.

Term
ballistic
Definition
:  a behavior that, once started, proceeds to completion even if the initial stimulus for the behavior is withdrawn
Term
Batesian mimic
Definition

a harmless and edible prey species resembles (mimics) a noxious and/or dangerous model species in order to deter predators.

Term
carrying capacity
Definition

either (1) the capacity of the environment to support populations, as measured by the resources available, or (2) the number of individuals of a given species that can be supported in a given environment.

 

Term
character displacement
Definition

allopatric populations of 2 different species are more phenotypically similar than sympatric populations of those species.  Character displacement is usually thought to be caused by interspecific competition.

Term
competitive release:
Definition

increase in range and/or resource use by one species when a competing species is removed.

Term
conformer
Definition

an organism that tends to let its internal environment follow (conform to) the external environment.

 

Term
conspecific
Definition
member(s) of the same species.  See ‘heterospecific’
Term
cryptic
Definition
hidden; camouflaged
Term
dispersal
Definition
movement in space.
Term
dispersion
Definition
pattern of placement in space relative to others
Term
ecological release
Definition

increase in range and/or resource use in the absence of some limiting factor, such as another species.

Term
ectotherm
Definition
an organism that seeks and uses external heat sources to adaptively manipulate its body temperature
Term
endotherm
Definition
an organism that generates metabolic heat to adaptively manipulate its body temperature.
Term
exploitative mimic
Definition

one species mimics a harmless or edible (or otherwise attractive) model species in order to get resources from a third species.  For example, a predator may mimic the food of a prey species in order to lure prey closer.

Term
facultative
Definition

adaptively expressing or not expressing a phenotype in response to changes in the environment; opposite of ‘obligate’.

Term
fitness
Definition
capacity to survive and/or reproduce as compared to others
Term
guild
Definition

:  a set of species that share the same range and use the same general set of resources (e.g. grazing animals in a prairie; birds foraging for insects under bark in a forest).

Term
heterospecific
Definition
member(s) of different species
Term
 homeostasis
Definition

:  maintenance, through physiological mechanisms, of a constant internal environment (condition) even though the external environment varies.

Term
homeotherm: 
Definition

an organism that maintains a constant internal body temperature.  See ‘poikilotherm’. 

Term
homologous
Definition

phenotypes that share a common ancestor are homologous.  See ‘analogous’.

 

Term
innate
Definition
behavior that is correctly expressed in the absence of prior learning experience
Term
interspecific
Definition
between different species
Term
intraspecific
Definition
within one species
Term
iteroparity
Definition
reproducing more than once in a lifetime (opposite of ‘semelparity’).
Term
mesopredator
Definition

a predator of intermediate size, e.g. raccoons as compared to weasels on the one side, and wolves on the other.

 

Term
negative feedback
Definition
a self-decelerating reaction; a situation in which a deviation from an equilibrium state tends to be followed by a return to that equilibrium.
Term
neutral
Definition
:  neutral variants have equal fitness.
Term
obligate
Definition

a phenotype or condition that is expressed at all times, regardless of environmental conditions.

 

Term
optimum
Definition

a best compromise between conflicting demands.  For example, beak size in a finch may be an optimum; big enough to crack most seeds (though not the biggest) and small enough to handle most small seeds (though not the smallest).

 

Term
phoretic:
Definition

transported by another organism (e.g. seeds stuck to a bird’s beak; burs in a dog’s coat).

Term
peripatric
Definition

:  lying on or outside a border or range.  Peripatric speciation is a result of long-range dispersal of a few colonizers.

 

Term
philopatric
Definition
returning to a birth site; staying in one location
Term
poikilotherm
Definition
an organism whose body temperature follows that of the environment (opposite of ‘homiotherm’
Term
positive feedback
Definition

a self-accelerating reaction; a situation in which a deviation from an equilibrium tends to increase.

Term
regulator
Definition

an organism that maintains a high level of homeostasis; opposite of ‘conformer’.

Term
sessile
Definition
stuck to one spot
Term
semelparity
Definition
having only one reproductive episode in a lifetime (opposite of ‘iteroparity’).
Term
sigmoidal
Definition
S- shaped
Term
sign-stimulus
Definition
an invariant stimulus that elicits an innate response
Term
super-stimulus
Definition
an exaggerated sign-stimulus
Term
sympatric
Definition
sharing the same geographic range
Term
taxon
Definition
any taxonomic group; a species or a set of species.  ‘taxa’ is the plural of ‘
Term
trophic
Definition

related to feeding, or energy flow.

Term
altricial
Definition

juveniles that are helpless and dependent on adult care for a prolonged period after hatching/birth (such as chicks of tree-nesting birds).  See ‘precocial’.

Term
antiparallel
Definition
currents that are adjacent (parallel) but flow in opposite directions, such as traffic on a 2-way street.
Term
petiole
Definition
a thin connection between two body parts or other structures.
Term
precocial
Definition
relatively independent at birth/hatching; opposite of ‘altricial’.
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