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Lect 2 - Prokaryotic Cell Structure
Microbiology
39
Biology
Undergraduate 3
04/03/2013

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Term
What are the characteristics of Eukaryotic cells?
Definition

Have Membrane Enclosed Nucleus

Have organelles 

larger size

80s Ribosome

Term
What are characteristics of prokaryotes?
Definition

- No nuclei, but instead nucleoids

- Lack organelles 

- Smaller in size (generally)

- 70s Ribosome

Term
What are the approximate cell sizes for prokaryotes?
Definition

- 1-2 micro meters wide, 2 - 10 micro meters long

 

Term
What are exceptions to the general sizes of prokaryotes?
Definition

Nanobacteria - < 0.2 micros

Some bacteria can be up to 750 micros

Term
What are the name of the bacteria and virus that are closest in diameter? (nm)
Definition
Rickettsia is the smallest bacteria (475), closest to the largest virus (230x320) NANOMETERS
Term
Describe Thiomargarita nambiensis.
Definition
Approx. 750 microns in diameter, which is around the size of the head of a fruit fly.
Term
Describe epulopiscium fishelsoni.
Definition
80x600 microns, approximately size of hyphen. Found with Brown surgeonfish (?)
Term
What are the six types of prokaryotic cell shapes?
Definition
Coccus, Bacillus, spirillium, spirochete, hyphae/ stalk, filamentous
Term
What is the role of Hyphae? Stalk?
Definition

Hyphae (e.g. Steptomyces) - Support and protection - part of APPENDAGED bacteria

Stalk (e.g. caulobacter) - contains only cytoplasmic elements, but not genetic material OR RIBOSOMES (no protein synthesis); possible role in nutrient absorption - part of BUDDING bacteria

 

*CAULOBACTER - EXAMPLE OF STICKING BACtERIA

Term
What are the different groupings of Coccus bacteria?
Definition

- Diplo - pairs

- Staphylo - grape-like clusters

-Strepto - chain

- Tetrads - groups of 4

- Sarcinae - groups of 8

Term

What are the different groupings of bacilli?

 

Definition
- Single, diplo, strepto (4), coccobacilli (combination)
Term
What are the different groupings of spirillium?
Definition

Vibrios - curved rods

Spirilla - 2 or more twists

Spirochetes - corkscrew

Term
What is the prokaryotic plasma membrane composed of?
Definition

- Phospholipid bilayer - asymetric > polar and nonpolar ends (amphipathic)

- membrane proteins - integral and peripheral proteins

Term
What are hopanoids, and what is their purpose?
Definition
- compounds embedded in the phospholipid bilayer, similar to cholesterol. Their purpose is to stabilize the membrane
Term
What are other membrane proteins found in the prokaryotic plasma membrane?
Definition

- Integral proteins: embedded in membrane; amphipathic

- Peripheral proteins: loosely attached

 

Term
What is the function of a plasma membrane?
Definition

- Separate cell from environment

- Selectively permeable barrier 

- passage of certain molecules

- Transport system for nutrient uptake and protein and waste excretion

- Location of crucial metabolic processes ie photosynthesis, lipid synth, and cell wall constituents

- detection and response to environment 

Term
What are internal membrane systems?
Definition

Mesosomes: possible invagination of plasma membrane

Complex in-foldings of the plasma membrane: observed in many photosynthetic bacteria and in proks. with high respiratory activity; may be aggregation of spherical vesicles, flattened, or tubular vesicles

Term
What are inclusion bodies, and where are they located?
Definition

- Located in cytoplasm, they are made of organic and inorganic material

- They function in nutrient and energy storage

- Possibly visible under light sources, used for identification

Term
Types of Inclusion Bodies (3).
Definition

PHB - Phosphate storasge and biodegradable plastics

Gas vacuoles - cyanobacteria; allows them to float

Magnetosomes - contain iron, navigation system oriented to magnetic field lines

Term
Prokaryotic Ribosomes
Definition

- Ribosomal RNA + protein

- 70S (Svedburg) - named after sedimentation velocity

- Site of protein synthesis

Term
What are plasmids?
Definition
Plasmids are extra-chromosomal DNA that function for containing extra genetic information (selective advantage). Not necessary for bacterial growth.
Term
What are the functions/characteristics of prokaryotic cell walls?
Definition

- Provides shape

- Protection from osmotic lysis

- COMPOSED OF PEPTIDOGLYCAN - formed by identical subunits, with alternating NAG/NAM linking sugar chains

Term
What are characteristic of gram positive and gram negative bacteria?
Definition

- Positive -peptide interbridge (purple)

- Negative - Direct cross-linking (Pink)

*In regards to peptidoglycan chains

Term
What are the characteristics of gram positive/negative bacteria?
Definition

G+ - thick layer of peptidoglycan, no outer membrane

  1.  contains Teichoic acid (Antigen) for negative charge, 
  2. Lacks Lipopolysacchirade
  3. Penicillin sensitive

G (-) - thin layer of peptidoglycan, OUTER MEMBRANE

  1. Antiobiotic resistant
  2. Contains LPS instead of Teichoic
  3. Outermembrane - barrier to transport, provides protection against antibiotics and digestive enzymes
  4. Contains porin proteins; allows larger molecules through
  5. Strengthened by BRAUNS LIPOPROTEIN
Term
What is LPS?
Definition

- The most unusual constituent of outer membrane in Gram negative cells

- Contains: Lipid A; core polysachirrade, and O-side chain

- Functions to give overall negative charge to surface, stabilizes surface, and can act as endotoxin

Term

*Describe the LPS Structure

Definition

O antigen: Polysaccharide chain extending

outwards from the core (recognized by host antibodies)

Core polysaccharide: Constructed of various sugars

Lipid A contains: 2 glucosamine sugar derivates,

each with fatty acids & phosphate or pyrophosphate

Term
What is the difference in periplasmic space between gram postive and gram negative?
Definition

Gram Positive - Very thin; contains exoenzymes; located between peptidoglycans and cell membrane

Gram Negative - Very thick; functions for peptidoglycan synthesis, nutrient aquisition, and modification of toxic compounds; found between plasma membrane and outer membrane

Term
Describe the structure of bacterial flagella.
Definition

Filament - extends from surface to tip 

Hook - links filament and basal body

Basal Body - embedded in cell; Gram positive has 2 rings, negative has 4 rings (L, P, S, M)

* Basal body is embedded in CELL

Term
What are endospores, and what is their function?
Definition

- Endospores are the resting state structure within bacterial cell

- Function for survival in adverse conditions, and re-activated when favorable

Term
What are the stages of transformation?
Definition
  1. Reactivation - prepares spores for germination resulting from treatment such as heating
  2. *Germination - Spore swelling, rupturing of coat, loss of resistance, and increased metabollic activity (VEGETATIVE)
  3. Outgrowth - emergence of vegetative cell
- Sporulation  - spore formation under stress (opposite of germination)
Term
What are possible roles for mesosomes?
Definition
  • Cell wall formation during division
  • Chromosome replication and distribution 
  • Secretion
  • These are possible artifacts of chemica fixation processes
Term
What are complex in-foldings? And where are they typically observed?
Definition

- Found as part of the plasma membrane in photosynthetic or highly respirative bacteria

- May be aggregates of spherical vessels, flattened vesicles, or tubular membranes

Term
What is the slime layer/capsule made of, and what are its functions?
Definition

- Made of polysachirrade and/or proteins

- Sticky layer is known as mucoid

- Functions: Adherence, Resistance to dessication, resistance to phagocytosis, improve motility

Term
What is the function for fimbrae/pili?
Definition

- Only found in Gram negative

- Used for attachment > Invasion and nutrient uptake

- NOT used for Motility


- Pili - Special type of fimbrae; possible use for DNA transfer

Term
What are the different flagella arrangements observed in bacteria?
Definition

- Monotrichous - one only

- Amphitrichous - polar (one at each pole)

- Peritrichous - spread evenly over entire surface

- Lophotrichous - a cluster at one or both ends

Term
In the basal body of Gram negative bacteria, what are the associations of each ring?
Definition

- L: LPS Layer

- P: Peptidoglycan-layer

- S: space

- M: Plasma MEMBRANE

Term
What are the associations of the basal rings of gram positive bacteria?
Definition

- Inner: Plasma membrane

- Outer: PG layer

Term
Describe 'Runs' and 'Tumbles' in bacterial movement.
Definition

- Runs - swim along, counterclockwise motion

- Tumble: Cell stops and tumbles by reversing direction of flagellum movement

- Clockwise rotation

Term
Describe the flagella movement of peritrichous bacteria.
Definition

- Bundle (CCW) 

- Tumble - flagella pushed apart (clockwise) 

- Flagella bundle - CC

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