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INTRODUCTION TO METABOLISM
BIO 311C
33
Biology
Undergraduate 1
05/11/2013

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Term
Metabolism
Definition
sum total of all chemical reactions in a biological system
Term
Metabolic Pathways
Definition
chemical reactions often organized into metabolic pathways
Term
Catabolic Pathways
Definition
release energy by breaking down complex molecules into simple molecules
Term
Anabolic Pathways
Definition
consume energy to build complex molecules from simple molecules
Term
Energy
Definition
the capacity to cause change or do work
Term
Kinetic Energy
Definition

energy associated with motion

 

Ex) heat

Term
Potential Energy
Definition

energy stored by matter as a result of its location or structure

 

Ex) chemical energy

Term
1st Law of Thermodynamics
Definition

energy can be transferred and tranformed, but it cannot be created or destroyed

 

principle of conservation of energy

Term
2nd Law of Thermodynamics
Definition

energy transformations increase the disorder of the universe

 

usefulness of energy changes

Term
Entropy
Definition
measure of "disorder"
Term
Free Energy (G)
Definition

energy available to do work in a system

 

ΔG - change in free energy, tells us whether a reaction occurs spontaneously

Term
ΔG = ΔH -TΔS
Definition

-ΔG: spontaneous, occurs on its own without extra energy added

 

+ΔG: not spontaneous, have to add energy for it to occur

Term
ΔG = G(final) - G(initial)
Definition

free energy is a measure of stability

 

high G = less stable

low G = more stable

 

spontaneous when there is a loss of free energy

Term
Exergonic Reaction
Definition

Energy out!

 

-ΔG - spontaneous

Term
Endergonic Reaction
Definition

Energy in!

 

+ΔG - non-spontaneous

Term
Energy Coupling
Definition
using an exergonic process to drive an endergonic process
Term
ATP
Definition

Adensoine Triphosphate - energy currency of life

 

Structure: ADP + phosphate group

Term
ATP Hydrolysis
Definition

+ H2O to ATP which results in:

Phosphate group + ADP + energy

 

exergonic

Term
Phosphorylation
Definition

transfer of a phosphate group to another molecule

 

generateds a reacted phosphorylated intermediate

Term
ATP Cycle
Definition

ADP + P = ATP (endergonic reaction, energy from cellular respiration)

 

ATP + H2O = ADP & P (exergonic, energy for cellular work)

Term
Enzyme
Definition
speed up chemical reactions, are catalysts
Term
Catalyst
Definition
chemical agents that speed up a reaction without being consumed by a reaction
Term
Activation Energy (EA)
Definition

initial amount of energy needed to start a chemical reaction

 

must be overcome for reaction to proceed

Term
Substrate
Definition
the reactant on which an enzyme works
Term
Active Site
Definition
the region on the enzyme where the substrate binds
Term
Substrate Specificity
Definition

reaction catalyzed by enzyme is very specific

 

specificity is based on the compatible fit between the active site and the substrate

Term
Induced Fit
Definition
binding of substrate causes slight change in enzyme's shape
Term
How Enzymes lower EA
Definition

enzymes lower activation energy by:

orienting substrates

strain substrate bonds

participate in reaction

Term
Functional Partners
Definition

give help to enzymes, affect enzyme activity

 

Cofactors, coenzymes, prosthetic group

Term
Enzyme Inhibitors
Definition

chemicals that selectively inhibit the activity of enzymes

 

irreversible, reversible, competitive, noncompetitive

Term
Allosteric Regulation
Definition
when a protein's function at one site is affected by the binding of a regulatory molecule/group to a separate site
Term
Feedback Inhibition
Definition
the end product of a metabolic pathway shuts down the pathway by inhibiting an ezyme in the pathway
Term
Enzyme localization
Definition
multienzyme complexes, membrane localization, organelle localization
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