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Introduction to Metabolism
Chapter 8: Terminology
35
Biology
Undergraduate 1
10/04/2008

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Term
cellular respiration
Definition
Drives the cellular economy by extracting the energy stored in sugars and other fuels.
Term
metabolism
Definition
The totality of an organism’s chemical reactions,consisting of catabolic and anabolic       pathways, which manage the material and energy resources of the organism.
Term

metabolic pathway

Definition

A series of chemical reactions that either builds a complex molecule (anabolic pathway) or breaks down a complex molecule into simpler compounds (catabolic pathway).

Term

catabolic pathway

Definition
A metabolic pathway that releases energy by breaking down complex molecules to simpler compounds.
Term

anabolic pathway

Definition
A metabolic pathway that consumes energy to synthesize a complex molecule from simpler compounds.
Term

energy

Definition

The capacity to cause change, especially to do work (to move matter against an opposing force).

Term

kinetic energy

Definition
The energy associated with the relative motion of objects. Moving matter can perform work by imparting motion to other matter.
Term

heat

Definition

The total amount of kinetic energy due to the random motion of atoms or molecules in a body of matter; also called thermal energy. Heat is energy in its most random form.

Term

thermal energy

Definition

See heat

The total amount of kinetic energy due to the random motion of atoms or molecules in a body of matter; also called thermal energy. Heat is energy in its most random form.

Term

potential energy

Definition

The energy that matter possesses as a result of its location or spatial arrangement (structure).

Term

chemical energy

Definition

Energy available in molecules for release in a chemical reaction; a form of potential energy.

Term

thermodynamics

Definition
The study of energy transformations that occur in a collection of matter. See first law of thermodynamics; second law of thermodynamics.
Term
first law of thermodynamics
Definition

The principle of conservation of energy: Energy can be transferred and transformed, but it cannot be created or destroyed.

Term

second law of thermodynamics

Definition

The principle stating that every energy transfer or transformation increases the entropy of the universe. Ordered forms of energy are at least partly converted to heat.

Term

entropy

Definition

A measure of disorder, or randomness.

Term

free energy

Definition

The portion of a biological system’s energy that can perform work when temperature and pressure are uniform throughout the system. (The change in free energy of a system is calculated by the equation ΔG = ΔH – TΔS, where H is enthalpy [in biological systems, equivalent to total energy], T is absolute temperature, and S is entropy.)

Term

exergonic reaction

Definition

(ek´-ser-gon´-ik) A spontaneous chemical reaction, in which there is a net release of free energy.

Term

endergonic reaction

Definition

(en´-der-gon´-ik) A nonspontaneous chemical reaction, in which free energy is absorbed from the surroundings.

Term

energy coupling

Definition

In cellular metabolism, the use of energy released from an exergonic reaction to drive an endergonic reaction.

Term

ATP (adenosine triphosphate)

Definition
a-den´-o-sen tri fos´-fat) An adenine-containing nucleoside triphosphate that releases free energy when its phosphate bonds are hydrolyzed. This energy is used to drive endergonic reactions in cells.
Term

phosphorylated

Definition

Referring to a molecule that is covalently bonded to a phosphate group.

Term

enzyme

Definition
A macromolecule serving as a catalyst, a chemical agent that changes the rate of a reaction without being consumed by the reaction.
Term

catalyst

Definition
A chemical agent that increases the rate of a reaction without being consumed by the reaction.
Term

activation energy

Definition

The amount of energy that reactants must absorb before a chemical reaction will start; also called free energy of activation.

Term
substrate
Definition

The reactant on which an enzyme works.

Term

enzyme-substrate complex

Definition

A temporary complex formed when an enzyme binds to its substrate molecule(s).

Term

induced fit

Definition

Induced by entry of the substrate, the change in shape of the active site of an enzyme so that it binds more snugly to the substrate.

Term

cofactor

Definition

Any nonprotein molecule or ion that is required for the proper functioning of an enzyme. Cofactors can be permanently bound to the active site or may bind loosely with the substrate during catalysis.

Term

coenzyme

Definition
An organic molecule serving as a cofactor. Most vitamins function as coenzymes in metabolic reactions.
Term

competitive inhibitor

Definition

A substance that reduces the activity of an enzyme by entering the active site in place of the substrate whose structure it mimics.

Term

noncompetitive inhibitor

Definition

A substance that reduces the activity of an enzyme by binding to a location remote from the active site, changing the enzyme’s shape so that the active site no longer functions effectively.

Term

allosteric regulation

Definition

The binding of a regulatory molecule to a protein at one site that affects the function of the protein at a different site.

Term

cooperativity

Definition

A kind of allosteric regulation whereby a shape change in one subunit of a protein caused by substrate binding is transmitted to all the others, facilitating binding of subsequent substrate molecules.

Term

feedback inhibition

Definition

A method of metabolic control in which the end product of a metabolic pathway acts as an inhibitor of an enzyme within that pathway.

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