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Immunology- Unit One T Pierce
Antigen Recognition
28
Medical
Post-Graduate
01/14/2009

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Cards

Term
Structure of B cell receptor
Definition
  • heavy and light chains
  • constant and variable regions
  • 2 Fab fragments and one Fc fragment
Term
What cells would find immunoglobulin domains on?
Definition
  • B cell receptors
  • T cell receptors
  • MHC moleculres
Term
How would you make monovalent Fab fragments in the lab? how would you make bivalent fragments?
Definition
  • monovalent- treat with papain
  • bivalent- treat with pepsin
Term
Where in the AA chain is the variable region found in the Fab segment? Fc segment?
Definition

at the N terminal end

at the C terminal end

Term
Describe what hypervariable regions are
Definition
certain complementary determining regions (CDR's) that give receptor its specificity (where it binds Ag)
Term
Define epitope
Definition
part of antigen that binds to immune receptors
Term
How does an antibody know what antigen to bind
Definition
  • based on conformational complementary
    • via non-covalent forces
  • the antigen has many different epitopes that can be recognized and stimulate an immune response
Term
Difference between immunogen and antigen
Definition
  • antigen- anything that binds to immune receptor
  • immunogen- substance that stimulates immune response by binding to immune receptor
Term
define haptens
Definition

antigens that bind to immune receptor and do not cause an immune response

Term
How can one elicit an immune response to a hapten?
Definition
  • must bind with a carrier protein to create hapten-carrier conjugates
  • this will cause the body to produce separate Ab's for the carrier and the hapten
Term
clinical applications where haptens are used
Definition
  • vaccines (ex: flu, pneumococcal)
  • diagnosis
    • detect cyclosporin in transplant patients
    • home pregnacy test (anti-hapten for hCG)
  • Penicllin allergy (binds to hapten at beta lactam group to cause immune response)
Term
What determines isotype of B cell receptor/antibody?
Definition
constant region of Ig heavy chain (associated with different functions)
Term
What types of epitopes do B cell receptors tend to recognize?
Definition
  • proteins in their native confirmation
  • non-protein antigens
Term

Epitopes that tend to be recognized by T cell receptors and how they must be presented?

Definition
  • proteins in denatured form (processed small peptide)
  • must be presented by APC's and bound to MHC
Term
Structure of T cell receptor
Definition
  • heterodimers of alpha, beta chains
  • variable and constant regions as well
  • can have gamma-delta type (primative)
Term
What is ment by MHC restriction?
Definition
T cells will recognize peptide on APC ONLY if they recognize the MHC and physically bind.
Term
Describe how superantigens work
Definition

THE EXCEPTION TO T CELL RULES

 

  • bind directly to the framework regions of T cell (not specific at all for a particular T cell) 
  • this produces a massive T cell response
Term

How do we generate antigen receptor diversity when we do not have enough gens to make millions of receptor types for B and T cells?

Definition
somatic recombination
Term
What site specific mini gene segments are targeted for recombination?
Definition
  • variable region (V)
  • diversity region (D)
  • joining region (J)
Term
Process of recombination
Definition
  1. RAG bind to RSS to initate gene rearrangement
  2. bring together D and J segment
  3. DNA cleaved to create hairpin structure at end of segment
  4. other proteins bind to hairpin
  5. hairpins cleaved
  6. TdT adds more nucleotides to generate more diversity
  7. ligase binds D and J segment
  8. process similar when DJ segment comes together with V segment to form VDJ as the new segment
Term
Relation of antigen to somatic recombination of genes for lymphocytes
Definition
No relation. It is a completely antigen independt process at the DNA level
Term
Role of recombination signal sequences in somatic recombination
Definition
conserved motifs that will flank the minigene segments
Term
During somatic recombination, what mini gene segments do the hypervariable regions tend to be found in
Definition
between the VD and DJ
Term
What gene region correspons with V-DJ junction in minigene segments for recombination?
Definition

CDR (most diverse region associated with Ag binding)

Term
What clinical use are the signal joints within the hairpin loops structures?
Definition
can look at the signal joints and test to see if new lymphocytes are being made in the body
Term

Example of how antigen rearrangement can lead to oncogene recombination

Definition
  • could translocate MYC gene from one chromosomne to the chromosome segment with Ig gene
  • this will cause MYC gene to be continually produces, leading to lymphomas or leukemia
Term
What makes a good antigen?
Definition
  • protein
  • foreign/dangerous
  • complex structure
  • large
  • can be processed by APC
Term

Name mini gene segments for light chain? heavy chain?

Definition

light chain- V, J, L, C

heavy chain- V, D, J, L, C

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