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Genomics exam 2 CYPs
with margy's CYPS table
24
Biology
Graduate
10/24/2011

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Term
Drugs/mnenomic associated with 3A4?
Definition
Substrates: benzos, CCBs, cyclosporine, macrolide abx, immunosuppressants

Inducers: Rifampin, Dexamethasone, Phenytoin, St. John’s wort

Inhibitor: Ritonavir
Term
Drugs/mnenomic associated with 3A5?
Definition
Tacrolimus. In nonexpressors of 3A5, drug levels are 1.5-2x higher
Term
Drugs/mnenomic associated with 3A7?
Definition
clinical impact is unclear
Term
Drugs/mnenomic associated with Amplichip?
Definition
2C19 and 2D6
Term
Drugs/mnenomic associated with 1A2?
Definition
Lots of C's associated with the '1'!

1 (customer), Chris, gets Clozapine and Caffeine. (substrates)

Inducers: He Smokes and eats Chargrilled and Cruciferous vegetables.
Term
Drugs/mnenomic associated with 2B6?
Definition
BICE.

Substrates: Bupropion, Ifosfamide (prodrug), Cyclophosphamide (prodrug), Efavirenz (mostly 2B6, but also 3A4 which is minor)

60% of Papua New Guineans have decreased activity of 2B6.
Term
Drugs/mnenomic associated with 2C9?
Definition
War? Funny you SAID we would Lose.

Warfarin, Phenytoin, NSAIDs, losartan (prodrug)

Warfarin: patients with *3/*3 variant need lowest dose. Wild allele (*1) needs highest dose.

Phenytoin: if homozygous for *2 or *3 variants, also need dose reduction.

NSAIDs: inc GI bleeding and inc CV risk

Losartan: prodrug, so dec CYP2C9 activity will decrease therapeutic benefit.
Term
Drugs/mnenomic associated with 2C19?
Definition
Funny that Vori is 19 and now needs Clopidogrel, PPIs, SSRIs.

Phenytoin (but more activity with 2C9), Voriconazole, clopidogrel (prodrug), omeprazole, citalopram/escitalopram.

PM (non-func), EM (inc activity), RM (wild).

Vori is asian, 14% Chinese and 70% pacific islanders are PM!
Term
Drugs/mnenomic associated with 2D6?
Definition
2 D ('to the') BAHA CAT.

B-blockers, Antipsychotics (Haloperidol), Antidepressants, Codeine (prodrug), Atomoxetine, Tamoxifen (prodrug)

PM (lacking), IM (dec activity), EM (wild), UM (2-13 gene copies)

Effects of PM:
BB: inc SE hypotension
Antidepressants: inc SE (extrapyridimal, parkinson-like)
Codeine: cant convert to morphine so stays in pain
Atomoxetine: inc SE
Tamoxifen: prodrug, so PM sees dec therap benefit and increased cancer recurrence :(
Term
Drugs/mnenomic associated with 2E1?
Definition
Lots of A's

Substrates: APAP, alcohol, (halogenated) anesthetics

Inducers: Obesity!, alcohol, nicotine (not smoking), organic solvents,
*1D means enzyme is highly inducible by obesity, alcohol, and isoniazid!
Term
NAT1
Definition
p-amonibenzoic/salicylic acid

Not many polymorphic alleles
Term
NAT2
Definition
isoniazid, dapsone, sulfonamides.

Slow acetylators: less metabolism so higher drug conc.
Term
UGT1
Definition
Irinotecan (prodrug?) whose active metabolite is SN-38.

UGTA1*28: polymorphism where TA repeats are inserted into the TATA (promoter region) and leads to decreased expression of UGT1. Thus, less metabolism and higher conc in blood and increased ADRs such as DIARRHEA!

Gilberts Syndrome is worsened by defects in UGT1 and other UGT enzymes. Person already doesnt have enough UGT activity so more susceptible to hyperbilirubinemia when given drugs Atazanavir and Indinavir (which compete for UGT and worsen jaundice)

Also, more susceptible to APAP!
Term
GST M1 and T1
Definition
deletions in these enzymes lead to inability to produce enough glutathione to combat oxidative stress and cancer. But having less of the enzymes means that the cancer drug substrates won't get metabolized as much and will be more beneficial because higher conc (less drug resistance)
Term
GST P1
Definition
CA CODE

Carboplatin, APAP, Cisplatin, Oxiplatin, Doxorubicin, and Etoposide.

Variants (*A and *B) increased conc, inc therapeutic effect, and inc toxicity :/

Minor alleles (Val 105): Asthma risk in children whose mothers took APAP while pregnant, since fetus doesnt have GST to conjugate/metabolize the NAPQI produced by APAP. NAPQI will be free to damage lungs and later lead to asthma
Term
Which enzyme is involved with APAP and NAPQI? What diease can it cause?
Definition
GST P1. Can cause asthma in children. Especially if defective GST. But I think babies dont have GST to even produce glutathione.
Term
60% of Papua New Guineans have defect in which CYP?
Definition
2B6
Term
14% Chinese and 70% Pacific islanders are PM with which CYP?
Definition
2C19 (think: i look like im 19 and im Chinese)
Term
Many asians and blacks are IM for which CYP?
Definition
2D6. about 30-40%
Term
North African and Mediterranean people are UM for which CYP?
Definition
2D6
Term
Which population have 50% slow acetylators? What enzyme is this?
Definition
white people. NAT2
Term
What population has about 30% and 50% defect in their UGT1? What drug is affected?
Definition
white people (30%) and black people (50%). Irinotecan (prodrug) whose metabolite is SN-38. Once SN-38 formed, it should be metab by UGT, but if there is low expression of UGT, then more ADRs (DIARRHEA)
Term
Which enzyme is found in hispanics and blacks commonly?
Definition
GST P1
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