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Genetics Final Exam
Chapters 8, 12, 14 (pop. gen), 18, 20 (Gene Therapy)
88
Biology
Undergraduate 4
05/03/2009

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Term
T/F: Mutations accumulate in all areas of the genome at the same rate.
Definition
false
Term
t/f: All mutagens are also carcinogens.
Definition
false
Term
Thalassemia is a disease due to mutations in the genes for _______.
Definition
hemoglobin
Term
t/f: Mutations in somatic cells would show up in a pedigree analysis.
Definition
false
Term
Myotonic dystrophy is due to a type of _________ mutation.
Definition
expanding repeat
Term
The Ames test is used to _________.
Definition
determine mutagenic properties of a chemical
Term
What type of mutations inserts a stop codon in an incorrect location in the coding sequence?
Definition
nonsense
Term
Thymidine dimers are repaired by which of the following mechanisms?
Definition
excision repair
Term
What mode of delivery removes cells from the body, treats them with gene therapy, and then reintroduces them back into the body?
Definition
ex vivo
Term
Gene therapy is most effect against ________ mutations in genes associated with _______ modes of inheritance.
Definition
reccessive; monogenic
Term
T/F: In gene therapy, the goal is to completely replace the defective gene with a copy of the new gene.
Definition
False
Term
T/F: The most effective method of delivering DNA to a cell, in terms of efficiency, is the use of liposome vectors.
Definition
False
Term
T/F: The use of viral vectors increases the risk of a severe immune response.
Definition
True
Term
What controls the activity of a neurotransmitter in a synapse?
Definition
number of receptors.
--- enzymes that degrade the neurotransmitter.
---activity of transporters
Term
Most mood disorders, such as bipolar disorder and depression, are due to problems with which neurotransmitter?
Definition
seratonin
Term
The FOXP2 gene is primarily associated with behavioral systems involving _______.
Definition
speech
Term
Within the nervous system, where does the body actually process information by adding and subtracting chemical signals?
Definition
the synapses between neurons
Term
Which of the following is primarily a communication disorder?
Definition
autism
Term
Which of the following disorders was first genetically researched in dogs, before using mice and human systems?
Definition
narcolepsy
Term
In which of the following does the heritability change over time, with older individuals showing less of an environmental influence?
Definition
intelligence
Term
T/F: Researchers now believe that sleep disorders are a cause of most behavioral problems.
Definition
False
Term
At the organismal level, tumor suppressor mutations act in a ___________ manner w/ regards to susceptibility, while at the cellular level they act in a _________ manner.
Definition
dominant; recessive
Term
p53 is an example of a ____________ gene/protein
Definition
tumor-supressor
Term
Fusion proteins most often belong to which of the following groups?
Definition
oncogenes
Term
T/F: our bodies contain special genes, called oncogenes, that are designed to cause tumors in tissues.
Definition
false
Term
What type of cancer may be inherited?
Definition
germline
Term
t/f: In cancer cells, the telomerase enzyme is usually active.
Definition
True
Term
The generation of blood vessels to supply tumors w/ nutrients is called__________.
Definition
angiogenesis
Term
T/F: BRCA 1 and BRCA2 are proto-oncogenes that are found only in breast cancer patients.
Definition
False
Term
T/F: Cancer is an example of a multifactorial trait.
Definition
True
Term
What is the real problem w/ behavior?
Definition
-partially genetic and environmental
--interaction b/t genes and environment
-hard to seperate Vg from Ve
Term
t/f: most behaviors are polygenic
Definition
true
Term
Some neato facts about ADHD!
Definition
very much genetic (3-5x chance increase if sibling is affected)
--has to do with how Dopamine is used in brain
--
Term
Behavior Genetics
Definition
Is the study of the nervous system (particularly the brain) variation and function.....
Neurophysiology and neuropharmacology
Term
Sensory Neurons
Definition
bring info to the brain
Term
Interneurons
Definition
integrate info
Term
Motorneurons
Definition
send info to muscles
Term
neurotrnasmitters
Definition
chemicals that communicate b/t neurons
Term
Autism facts
Definition
disorder in communication.
--doesn't show up till 3 (same time as vaccines)
--deletion on chromosome 22 Q 13
--asperger syndrome is mild form of autism
--Foxp2 gene disruption is thought to be cause
--Individuals with fragile-X syndrome often develop autism
Term
sleeping disorders
Definition
Without sleep animals die
The function remains unclear
Genetic contributions are indicated by heritability among families and identification of genes in model systems
Twin studies indicate 4 of the 5 stages of sleep have a hereditary component
Environmental influence is great
Term
Narcolepsy with Cataplexy
Definition
--Daytime sleepiness with tendency to rapidly fall
asleep (narcolepsy) and periods of muscle
weakness (cataplexy)
--1999, first gene identified with sleep in dogs

----In Humans
1-2% risk with first degree relative
25-31% concordance among MZ twins
Term
Intelligence facts
Definition
--Complex and variable trait subject to multiple genes and environmental influences and intense subjectivity
--Refers to ability to reason, learn, remember, synthesize, deduce, create
--IQ is normally distributed around a mean of 100.
below 50 severe mental retardation
50-70 mild mental retardation
85-115 average
above 115 above average
Term
mood disorders
Definition
Mood disorders represent the extremes of normal behavior.
Term
Serotonin
Definition
a neurotransmitter, can affect mood, emotion, appetite, and sleep
Term
Schizophrenia
Definition
A disorder marked by the loss of the ability
to organize thoughts and perceptions

leads to a withdrawal from reality
1% of worldwide population is affected
Onset typically early adulthood

Progression of disorder:
Difficulty paying attention
Memory and learning skills affected
Psychosis (17-27 males, 20-37 females) delusions and hallucinations

-2.4 million usa starts around early 20's
-CoMt- dopamine
-triggered by stress and is #1 cause of suicide
-def a multifactorial trait
Term
cancer
Definition
A group of diseases caused by loss of cell cycle control

Associated with abnormal uncontrolled cell growth
Term
Timing, rate, and number of cell divisions depend on
Definition
Protein growth factors
Signaling molecules from outside the cell
Transcription factors within
Term
Oncogenes
`
Definition
Cause cancer when inappropriately activated
Term
Tumor suppressor genes
``
Definition
Deletion or inactivation causes cancer
Term
Telomerase
Definition
the protein and enzyme complex that adds telomere sequences to the ends of chromosomes


Presence of telomerase and telomeres allows cells to pass a cell cycle checkpoint and divide
Term
Characteristics of cancer cells
Definition
-Divide continually (given space and nutrients)
-Contain heritable mutations
-Dedifferentiated: lose their specialized identity
-Different appearance: reflects dedifferentiation
-Lack contact inhibition
-Induce angiogenesis (local blood vessel formation)
-Increased mutation rate
-Invasive: squeeze into any space available
-Metastasize: move to new location in the body
Term
A chemical _______ may stimulate differentiated cells to divide and produce progenitor cells in mice
Definition
“reversine
Term
Origins of Cancer Cells
Definition
1) Cancer stem cells
2) dedifferentiation and reacquisition of self renewal.
3) Increase in proportion of stem and/or progenitor cells in tissue
4) Out-of-control tissue repair
Term
Proto-oncogens are called ________ in their mutated form
Definition
oncogenes
Term
proto-oncogens are....
Definition
normal versions of genes that promote cell dividson
--Expression at wrong timee or in the wrong cell typ leads to cell division and cancer
Term
How many copies of oncogenic mutation is sufficient to promote cell division>
Definition
one!
Term
Fusion proteins
Definition
the double gene product that occurs when a proto-oncogene moves next to another gene and the gene pair is transcribed together

---Ex: chronic myeloid leukemia (CML)
Term
more than 50% of human cancers involve an abnormal what?
Definition
p53 gene
-p53 acts as a cell cycle protein and determines if a cell has repaired DNA damge. if damage cannot be repaired then p53 induces apoptosis
Term
BRCA1 gene
Definition
a breast cancer susceptibility gene
-tumor suppressor gene
--increases risk of developing breaset and ovarian cancer
-lack of any functional BRCA1 leads to cancer cells
Term
BRCA2
Definition
encodes for nuclea protein and functions in cytokinesis.

---increases risk of breast, ovarian, colon, prostate, pancreas, gallbladder, and stomach cancers (also melanomas)
Term
gate keeper genes
Definition
directly control mitosis and apoptosis
Term
caretaker genes
Definition
control mutation rates and may have an overall effect, when mutatnt destabilizing the genome
Term
t/f: cruciferous vegetables can lower cancer risk
Definition
true! like brussel sprouts and broccoli
Term
Gene flow
Definition
alleles can move b/t populations when individuales migrate and marry
Term
Difference b/t allelic and frequency
Definition
allelic = # of particularallel

-frequency = total # of alleles in the population
Term
Difference b/t Microevolution and macroevolution
Definition
microevolution = genetic change due to changin allelic frequencies in populations

-macro evolution = the formation of a new species
Term
hardy-weingberg equilibrium
Definition
Used algebra to explain how allele frequencies predicts genotype and phenotype frequencies in equilibrium

p = allele frequency of one allele
q = allele frequency of a second allele

[p^2 + 2pq + q^2 = 1.0]

--p^2 = % of homozygous dominant people

--q^2 = % homozygous recessive people

--2pq = % of heterozygotes
Term
Some Facts about DNA profiling
Definition
=used alot in environmental protections
-small, small amounts of material can be used
-procedures were optimize following 9/11
-uses mitochondrial DNA (only 1 copy of mitochondrial DNA and can by easily traced throughout family history)
Term
types of gene therapy
Definition
1)Ex vivo =gene therapy alters cells outside of body ---

2)In situ =gene therapy occurs in a localized area

3)In vivo= gene therapy vector is introduced directly into the body; most invasive
Term
2 vectors used to deliver gene therapy
Definition
1) liposomes - series of phospholipids that receive genes (doesn't get immune response but doesn't work alot b/c cell doesn't want it)

2) Viruses -gene is put in viruse DNA which attacs body. most viruses are very specific in attack but immune system hates it.
Term
which vector for gene therapy is used the most and why?
Definition
viruses are the most uesed (unless immune system is compromised)
-viruses have small genomes and target specific host cells
Term
What was the first gene therapy?
Definition
Adenosine deaminase deficiency was first inherited disease treated w/ gene therapy.

ADA is an enzyme involved with purine metabolism
Term
cystic fibrosis
Definition
It is caused by a defect in a gene that encodes an ion transport protein
This leads to an abnormality in salt and water balance
This, in turn, leads to accumulation of mucus in the lungs
The result is chronic lung infections which prove fatal
Term
T/F: aerosol sprays may be used to treat cystic fibrosis
Definition
true
Term
Point Mutation
Definition
change of a single nucleotide to one of the other 3 possible nucleotides
Term
missence mutation
Definition
point mutation that exchanges one codon for another causing substitution of an amino acid
Term
nonsense mutation
Definition
point mutation that changes a codon for an amino acid into a stop codon
--this creates a truncated protein
Term
truncated protein
Definition
--made by nonsense mutation
--these are often nonfunctional
--some truncations have dominate effects due to interferences w/ normal functions
Term
Expanding repeats
Definition
insertion of triplet repeats leads to extra amino acids
--the larger expanding the earlier the onset and the more servere the disorder
Term
Muscular dystrophy
Definition
--myotonic dystrophy
-2 types : MDD1 and MDD2
-50-1000 repeats of some thing genetic
-muscles can't contract or relax
-genes w/ 40 + copies are unstable and can gain repeat copies in successive generations
Term
alzheimers disease
Definition
--Mutations in presenilin1 cause early onset autosomal dominant Alzheimer disease

--
Presenilin protein is a receptor anchored in the Golgi membrane
--Monitors beta amyloid usage
--30+ missense mutations in presenilin result in beta amyloid accumulation.
Term
collagen facts
Definition
60% of protein in bone and cartilage

-
--Has a precise structure:
triple helix of two alpha1 and one alpha2 proteins
the longer precursor called procollagen is trimmed to form collagen
Term
de novo mutations
Definition
aka spontaneous mutations

--not caused by exposure to known mutagen

--errors in DNA replication

--DNA bases have slight chemcial instability (exists in alternating forms called tautomers)
Term
Mutational Hot Spots
Definition
1) Short repetitive sequences (pairing of repeats may interfere w/ replication or repair enzymes)


2) Palindromes - (often associated with insertions or deletions)

3)Duplications of larger regions (mispairing during meiosis)
Term
What is an Ames test?
Definition
its an in vitro test of the mutagenicity of a substance using Salmonella bacteria w/ mutation in gene for histidine
Term
pseudogen
Definition
a DNA sequence reminiscent of a gene but which is not translated (may or may not be transcribed.)

--pretty much a false gene

--comes from duplications
Term
mismatch repair
Definition
occurs when enzymes detect nucleotides that do not base pair in newly replicated DNA
Term
Excision Repair
Definition
damaged DNA is removed by excision of the bases and replacement by a DNA polymerase
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