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Exam 2
GBIO 153
70
Biology
Undergraduate 1
03/28/2010

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Term
Life arose spontaneously from non-living material (and continues to do so daily).
Definition
Spontaneous generation
Term
Used two jars with meat, one exposed and one covered and observed that there were maggots on the exposed container and no maggots on the covered container. Experiment to test spontaneous generation.
Definition
Redi's experiment
Term
Experiment where two flasks of broth were heated and one was then covered and one was left exposed. It was observed that microbes grew in the exposed flask and no microbes grew in the sealed flask. Experiment to test spontaneous generation.
Definition
Spallanzani's experiment
Term
Experiment where a flask of broth with an exposed extension was heated. It was observed that no microbes grew in the flask until the extension was broken off. Experiment to test spontaneous generation.
Definition
Pasteur's experiment
Term
Created as a result of the study of fossils. The fossils reflect biological events that occurred due to environmental changes. Divides the history of the earth into eons, eras, and periods.
Definition
Geologic timeline
Term
4.6 to 0.6 billion years ago. This eon coves almost 90% of the entire history of earth. Originally used to refer to the period of earth's history before the formation of the oldest rocks with recognizable fossils in them.
Definition
Precambrian
Term
The Precambrian eon includes theses three eons
Definition
Hadean, Archean, and Proterozoic
Term
"Hades-like," 4.6 to 3.8 billion years ago, formation of the earth (liquid rock, boiling sulfur, hot, steamy, dusty),the atmosphere was composed of CO2, water vapor, sulfur, and nitrogen, known as the rockless eon
Definition
Hadean eon
Term
Development of organisms (life) from non-living matter. Haldane and Oparin proposed that the building clocks of life (amino acids, sugars, lipids, and nucleotides) were formed in the primitive environment of earth.
Definition
Prebiotic evolution
Term
Tested Haldane and Oparin's proposal of prebiotic evolution in the lab
Definition
Urey and Miller
Term
Amino acids placed in heated water, cooled, assembled into tiny, stable selectively permeable spheres.
Definition
Protenoid microspheres
Term
"Ancient or primitive era," things cooled down a bit, most of the water vapor in the air as cooled and condensed to form a global ocean, the beginning of the rock record, the atmosphere is mostly nitrogen. 3.8 to 2.5 billion years ago, the first life appeared around 3.8 billion years ago
Definition
Archean eon
Term
Formed as huge mounded colonies of cyanobacteria and other microorganism trap fine sediment, alternating layers of organisms and sediment
Definition
Stromatolites
Term
2.5 to 0.5 billion years ago, 2 large continents have formed by this time, oxygen is accumulating in the atmosphere, oldest eukaryotic fossils found 1.5 billion years ago, oldest soft-bodied invertebrate fossils (multicellular with not exoskeleton)
Definition
Proterozoic eon
Term
Mitochondria and chloroplasts are similar n size to average prokaryote, replication of mitochondria and chloroplast, circular piece of DNA in mitochondria and chloroplast in matrix and stroma respectively, and prokaryotic ribosomes are found in mitochondria and chloroplasts, theory that mitochondria and chloroplasts arose from prokaryotes
Definition
Endosymbiotic theory
Term
"Evident life," rocks contain lots of fossils, the continents continued drifting, 3 eras that consist of 10% of the earth's time
Definition
Phanerozoic eon
Term
3 eras that were part of the Phanerozoic Eon are
Definition
Paleozoic, Mesozoic, and Cenozoic
Term
0.5 billion years ago to 245 million years ago, most of land is still locked in two supercontinents called Gondwanaland and Laurasia, there are huge glaciers and earth is experiencing one of its ice ages, the air has reached something like what we breathe now: about 4/5 nitrogen, 1/5 oxygen, and small amount of CO2, water vapor, and other gases; the development of life can be followed in detail (life forms at the beginning of the era and hard parts like shells, teeth, bones, and woody parts are seen)
Definition
Paleozoic era
Term
Period during the Paleozoic era when marine algae flourished and invertebrates with exoskeletons dominated
Definition
Cambrian period
Term
Period during the Paleozoic era when inverts spread and diversify and jawless fish and first inverts appear. Marine algae also flourish.
Definition
Ordovician period
Term
Period during the Paleozoic era when low-lying vascular plants and jawless fish appear
Definition
Silurian period
Term
Period during the Paleozoic era when jawed diversify and dominate, first insects and amphibians appear and first seed ferns appear.
Definition
Devonian (Age of Fish) Period
Term
Period during the Paleozoic era when amphibians diversify and dominate, first reptiles appear and the first great radiation of insects. Coal forming forests: club mosses and horsetails
Definition
Carboniferous (Age of Amphibians) Period
Term
Period during the Paleozoic era when reptiles diversify and amphibians decline and conifers appear
Definition
Permian (Age of Reptiles) Period
Term
Era when non-flowering seed plants dominate, reptiles diversified and flourished (adaptive radiation to a variety of environments - scaly skin and hard-shelled eggs)
Definition
Mesozoic Era
Term
Period during the Mesozoic Era when first mammals and first dinosaurs appear; corals and mollusks dominate and cycads and ginkgoes appear and forest of gymnosperms and ferns flourish
Definition
Triassic Period
Term
Period during the Mesozoic Era when dinosaurs flourish and birds appear and cycads and other gymosperms flourish
Definition
Jurassic (Age of the Cycads) Period
Term
Placental mammals appear and modern insects appear, flowering plants spread and conifers decline
Definition
Cretaceous Period
Term
Era from the present to 66.4 million years ago, mammal diversification: adaptive radiation to occupy habitats left vacant by demise of the dinosaurs, human evolution
Definition
Cenozoic Era
Term
Period during the Cenozoic Era when all modern mammals are represented, primitive primates, herbivores, carnivores, and insectivores appear, many modern families of flowering plants evolve, subtropical forests thrive, and angiosperms diversify
Definition
Paleogene Period
Term
Period during the Cenozoic Era when apelike mammals and grazing mammals, first hominoids appear, modern humans appear, grasslands spread as forests decrease, herbaceous angiosperms flourish, herbaceous plants diversify and spread, and the destruction of tropical rain forest accelerate extinction.
Definition
Neogene (Age of Human Civilization) Period
Term
At least 5 occurred at the end of the Ordovician, Devonian, Permian, Triassic, and Cretaceous Periods
Definition
Mass extinctions
Term
An asteroid explosion that produces meteorites that fall to earth, meteor strikes produce a cloud of dust that blocks the sun and causes plants to freeze and die, high amount of iridium found in asteroids and meteorites, but is rare on earth, layer of soot also found associated with the iridium layer
Definition
Cause of mass extinctions
Term
Contributed to Ordovician extinction and maybe Devonian, Gondwanaland drifted to South Pole: extreme change in temperatures and marine inverts and coral reefs were hard hit
Definition
Continental drift
Term
Permian extinction: 90% of ocean species and 70% of land species gone, no polar ice caps to stimulate ocean currents, organic matter stagnated at bottom of ocean, continents drifted and currents started, excess carbon dioxide produced by changes in ocean currents that stirred up stagnate organic matter on the ocean floor
Definition
Global warming
Term
Acellular, cannont replicate unless inside of a cell (never arise from pre-existing ones), are metabolically inactive unless inside of a cell (do not conduct fermentation cellular respiration or photosynthesis, All living cells can be infected by this including archae and bacteria, all living cells serve as hosts, lack cell wall and ribosomes: are not affected by antibodies, properties used most often in classification derive from electron microscopy
Definition
Viruses
Term
Normally species specific and tissue specific and particular type of tissue specific, Virion morphology (structure and dimensions, presence or absence of an envelope), type of the genomic nucleic acid (DNA or RNA), and the type of cell
Definition
Classification of viruses
Term
Range from 20-200 nanometers in diameter
Definition
Size of a virus
Term
The protein shell of a virus that encloses the nucleic acid
Definition
Capsid
Term
Morphological subunits of capsid of a virus
Definition
Capsomere
Term
Capsid and nucleic acid core of a virus
Definition
Nucleocapsid
Term
Double-stranded or single-stranded DNA or double-stranded or single-stranded RNA of a virus
Definition
Nucleic acid core
Term
20 equilateral triangular capsomerers, hollow
Definition
Icosahedron Symmetry
Term
Collision, Adsorption and binding, penetration of DNA (DNA of virus is injected into cytoplasm of the host cell and the rest of the virus is not), host DNA is degraded and nucleotides used to make more viral DNA, virus takes over cellular machinery (transcribes and translates viral DNA to make phage proteins: biosynthesis), assembly of new phages, phage encoded enzyme causes cell to lyse, virus carries enough genes to code for new viruses
Definition
Lytic Cycle
Term
Collision, adsorption and binding, penetration of DNA (DNA of virus is injected into cytoplasm of the host cell and the rest of the virus is not), phage DNA integrates into the bacterial chromosomes and becomes noninfectious, as cell divides, chromosomes with integrated phage replicates, under certain circumstances, the prophage may separate and the cell will enter the lytic cycle
Definition
Lysogenic Cycle
Term
Adsorption, penetration (fusion of membranes or viropexis), uncoating (by lysosomal activities or enzymes within the cytoplasm- the capsid is removed), biosynthesis (lytic or dormant), released by budding, obtaining its envelope from the host cell plasma membrane or nuclear envelope
Definition
Plant and Animal Viral invasion
Term
HIV and certain cancers, RNA virus: reverse transcriptase, special enzymes that transcribe, the DNA integrates into the host cell genome, antigen: causes an immune response, antibodies: formed specifically in response to being exposed to an antigen
Definition
Retroviruses
Term
May cause benign skin tumors (warts), but human genital warts become malignant if they persist; cervical cancer
Definition
Papillomavirus
Term
Rhinovirus, Coronavirus, Adenovirus
Definition
Common colds
Term
Inhibits viral replication (inhibits one or more steps in the life cycle of the virus; may be harmful to host cells: reverse transcriptase inhibitors, protease inhibitors, prevents viral uncoating, prevents penetration, prevents DNA replication), Virucidal agents (directly inactivate the virus), Immunonomodulators (boost hot's immune response: interferon)
Definition
Antiviral agents
Term
Naked strands of RNA not covered by a capsid
Definition
Viroids
Term
Protein molecules; have a misshapen tertiary structure and somehow cause other similar proteins to become misshaped and pathogenic: linked to Mad Cow Disease
Definition
Prions
Term
0.2 to 10 micrometers in length, ancient fossil record indicates that they were the first cells, about 5000 described species, but suspect many more
Definition
Prokaryotes
Term
Bounded by a plasma membrane, lack membrane-bound organelles, cytoplasm with ribosomes and cytosol (protein synthesis), nucleoid region that contains DNA, no true nucleus
Definition
Basic structure of prokaryotes
Term
Provides protection and gives shape, peptidoglycan is main component (chains of sugars cross-linked with amino acids forming one large molecule around entire cell: Bacteria, not Archea)
Definition
Cell wall of prokaryotes
Term
Asexual reproduction (binary fission); some may reproduce every 20 minutes under optimal conditions
Definition
Reproduction of prokaryotes
Term
Layer of polysaccharide rich phospholipid outside of the cell wall; some of the polysa are disease-causing toxins
Definition
Outer membrane or Lipopdysaccharide layer (LPS)
Term
Not essential to life, this slimy layer of polysaccharide (sometimes proteins) protects the bacterial cell and is often associated with pathogenic bacteria because it serves a s a barrier against phagocytosis by white blood cells
Definition
Capsule of prokaryotes
Term
Protective, resting structures formed in adverse conditions, no metabolic activity
Definition
Endospores
Term
Used in biological warfare, gram positive: purple, contaneous (skin), inhalation (lungs)
Definition
Bacillus anthracis (anthrax)
Term
Flagella coming from more than one place
Definition
Amphitrichous
Term
Flagella coming out from the same place
Definition
Lophotrichous
Term
Used for motility
Definition
Flagella
Term
Adherence to host cells and sex pili enable conjugation to occur: plasmids
Definition
Pili (lateral gene transfer)
Term
Able to colonize the gastric mucosal cells of humans, i.e. the lining of the stomack, and it ahs been well established as the cause of peptic ulcers
Definition
Helicobacter pylori
Term
Cell wall structure allows bacteria to stain differently when using Gram staining technique, used as an identifying characteristics, also medical application
Definition
Gram Staining properties
Term
Dense cell wall (purple)
Definition
Gram positive
Term
Thinner peptidoglycan layer and covered by a thin outer membrane (red)
Definition
Gram negative
Term
Susceptible to penicilin and penicilin derivatives; inhibits cell wall synthesis
Definition
Staphylococcus
Term
Gram negative, sexually transmitted disease
Definition
Neisseria gonorrhoeae
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