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Exam 1
Introduction
134
Biology
Undergraduate 1
04/23/2012

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Term
Types of Divine Revelation
Definition
1. General
2. Special
Term
What we should avoid
Definition
1. Shameful interactions (ad hominen attacks) with those of differing positions
2. Abandoning attempts to reconcile special & general revelation
3. Jumping to shallow, poorly considered conclusions
Term
What we should pursue tenaciously-humility
Definition
1. Most humbly realize the fallenness of our faculties, in terms of interpreting BOTH general revelation and special revelation, and in terms of our abilities to properly knit together the two
2. We see only a poor reflection in the mirror of creation (1 Corinthians 13:12)
Term
Interpretations of the Genesis account of creation days: wide diversity of opinion among professing evangelical Christians
Definition
1. 6-day
2. Day-Age
3. Analogical Days
4. Framework
All reject unguided evolutionary mechanisms as the ultimate source of biological diversity.
Term
6-day (R.C. Sproul, Calvin, Luther)-Young Earth
Definition
1. Most often associated with a young earth, Earth as viewed as 4000-5000 years old
2. Most straightforward reading of the Genesis text
Term
Day-Age (Hugh Ross, James Montgomery Boice, Francis Schaeffer)-Progressive, Creationism
Definition
1. "Yom" as age rather than literal 24-hr day
2. Scientific evidence of old earth suggests a different reading of Genesis
3. While the sequence of events is laid out in Genesis as a historical account, the days are not 24-hr periods
Term
Analogical Days (Augustine, Herman Bavinck)-Interpretation
Definition
1. Days are God's workdays, not identical to our workdays (only analogous)
2. Days are not of known length, may overlap or represent a logical rather than chronological breakdown of God's creative activities
Term
Framework (Meredith Kline, Mark Futato)
Definition
1. Similar to analogical day view
2. Creation week is a metaphor, a poetic vehicle to communicate historical creation activities
3. Length of actual days is unspecified, and order and timing of events is viewed as unimportant
Term
Evidence for the age of the Earth
Definition
1. Many features give an appearance of age
2. Sedimentary rock strata-show distinctive assemblies of fossil organisms
3. Radiometric dating of fossils (indirect measures)
4. Limits of radiometric dating techniques
Term
Proposed geological timescale
Definition
4.55 billion year history
Term
Sedimentary rock strata
Definition
Simpler organisms in deeper strata, more complex organisms in higher strata
Term
Radiometric dating of fossils
Definition
1. Carbon 14-ratio of C12 to C14 [Assumes that production of C14 in upper atmosphere is constant]
2. Potassium 40-volcanic rock, ratio of potassium 40 to argon 40
Term
Limits of radiometric dating techniques
Definition
Often require assumption about: initial amounts present in a material; assume constant rates of radioactive decay
Term
Proposed Geological Eons, Eras, Periods
Definition
1. Hadean Eon
2. Archaean Eon
3. Proterozoic Eon
4. Phanerozoic
Term
Hadean Eon
Definition
proposed to be 4.5 billion years ago; towards the end of the era there was fossil evidence that point to prokaryotes-bacteria
Term
Archaean Eon
Definition
3.8 billion years ago; scion bacteria & photosynthetic bacteria as well as the 1st eukaryotic cells
Term
Proterozoic Eon
Definition
2.5 billion years ago; multicellular eukaryotes; later on, bilateral eukaryotes (head & tail end; left & right back)
Term
Phanerozoic
Definition
543 million years ago; most of the body forms of multicellular eukaryotes arises
Term
Cambrian Explosion
Definition
occurs at end of Phanerozoic; insects, plants, animals, reptiles, etc.
Term
BIological Evolution
Definition
1. A heritable change in one or more characteristics of a population or species across many generations
2. From a genetic perspective, involves changes in allele frequencies over time
Term
Microevolution
Definition
Evolution viewed on a smaller scale, relating to genetic or phenotypic changes in population over time
Term
Macroevolution
Definition
Evolution viewed on a larger scale relating to formation of new species or groups of species
Term
Charles Darwin
Definition
1. British naturalist born in 1809
2. Developed a theory of evolution, presented in 1858 at a meeting of the Linnaean society & published the ideas in 1859 ("The Origin of Species")
3. Alfred Russell Wallace independently came up with a similar theory, presented it alongside Darwin
Term
Darwin's Philosophical Context
Definition
1. Greek Ideas
2. Natural Theology
Term
Greek Ideas for Darwin's Philosophical Context
Definition
1. Plato's essentialism
2. Aristotle-an ordered "ladder of life" with each rung occupied; no room for change
Term
Plato's essentialism
Definition
1. Variation of the ideal, "real" form
2. Evolution would not occur in a world of perfectly adapted creatures
Term
Natural Theology for Darwin's Philosophical Context
Definition
1. Creator's plan could be understood by studying nature
2. Adaptations of organisms were evidence that creatures were designed for a particular purpose
3. Classification allowed an appreciation of the hierarchal steps of the ladder of life
Term
Influences on Darwin's thinking
Definition
1. Linneaus (1707-1778)
2. Cuvier (1769-1832) and Catastrophism
3. James Hutton (1726-1797) and Charles Lyell (1797-1895)
4. Lamarck (1744-1829)-a drive toward complexity
Term
Linneaus
Definition
1. Father of taxonomy
2. Classifications (KPCOFGS) were not attempts to establish evolutionary relationships
3. Rather, "Dues creavit, Linnaeus disposuit" (God creates, Linnaeus arranges)
Term
Cuvier & Catastrophism
Definition
1. Interpreted fossil strata as a record of life's history
2. Speculated that boundaries between fossil strata correspond to the time of historical catastrophic events
3. Catastrophic events caused mass extinctions; changes in species from one stratum to the next reflected immigration of organisms from other areas
Term
James Hutton & Charles Lyell
Definition
1. Profound geological change due to slow, continuous processes that continue to operate the world
2. Canyons form by slow erosion; fossil-bearing strata slowly accumulate over time
3. Suggested Old Earth
Term
Lamarck
Definition
1. Developed an early evolutionary model (1809)
2. Organsims have the tendency to adapt & change in response to their environment
3. A continuous line of descendent from simple ancient organisms to more complex modern organisms
4. Organs & structures not used deteriorate, organs & structures that aid in survival are retained & strengthened
5. Adaptive changes in an organism are heritable (passed onto offspring)
Term
Other Influences on Darwin's Thinking
Definition
1. Thomas Malthus, an Anglican minister & "doomsday" economist
2. Selective breeding
Term
Thomas Malthus
Definition
Suggested that unchecked population growth would inevitably lead to famine, disease, and a ceaseless struggle for existence
Term
Selective breeding
Definition
1. Many traits are transmitted from parents to offspring
2. Selective breeding procedures designed to modify traits in domesticated species-selected characteristics chosen by breeders, allowed to produce offspring
3. Darwin thinking influenced by the remarkable accomplishments of pigeon breeders
4. Might "natural" forces alter the features of living organisms over time?
Term
Darwin's Voyage on the Beagle
Definition
1832-1836
Term
Darwin's Observations
Definition
1. On the trip, read Lyell's "Principles of Geology," became convinced of the uniformatarian view of an ancient & changing earth
2. South American flora & fauna were distinct from that found in Europe
3. Temperate South American flora and fauna were more similar to tropical South American flora and fauna than organisms in similar temperate climates in Europe
4. South American flora and fauna resembled fossil organisms in S. America
5. Struck by distinctive traits of island species that provided them ways to better exploit their native environment
Term
Darwin's Observations on the Galapagos Islands
Definition
On the Galapagos Island chain, found unique species (similar to distinct from mainland species), some unique to individual islands
Term
Galapagos Island finches
Definition
saw similarities in species yet noted that differences that provided them with specialized feeding strategies
Term
Darwin's Conclusions:Descent with Modification
Definition
1. Two separated populations of a species could diverge as each adapted to local conditions
2. Or, if environmental conditions change dramatically, a species' characteristics could change over time
3. Over many generations, divergence could become pronounced enough to generate new species
4. A controversial assertion: going far enough back in time, all species related through ancestral connections
Term
Darwin's Conceptual Framework
Definition
4 different observations
Term
Observation 1
Definition
If all individuals survive to reproduce to the extent they are capable of, populations would tend to grow exponentially
Term
Observation 2
Definition
Environmental resources are often limited: Interference 1
Term
Interference 1
Definition
Reproductive activity can lead to a struggle for existence-not all individuals will survive this struggle: observation consistent with this interference-populations tend to remain stable in size over time (exponential increases are not typical)
Term
Observation 3
Definition
Variation in many observable traits abounds in populations of organisms
Term
Observation 4
Definition
Much of this variation is heritable: Interference 2 & Interference 3
Term
Interference 2
Definition
Survival is not random, but may depend upon how well adapted an organism is to compete for resources; best fit individuals will leave more offspring (=Natural Selection)
Term
Interference 3
Definition
Populations will gradually change under the influence of natural selective pressures, will become better adapted for prevailing conditions
Term
"The Modern Synthesis"
Definition
1. Darwin's theory preceded Mendel's genetics work; no conception of mechanism of inheritance
2. Genetics has allowed us to understand the relationship between traits and heritability
Term
Key Features of the Modern Synthesis
Definition
1. Natural variation exists that is caused by random changes in the genetic material
2. Genetic changes may be advantageous, disadvantageous, or neutral
3. If genetic change promotes an individual's survival and/or ability to reproduce natural selection may increase the prevalence of that trait in future generations
Term
The Fossil Record
Definition
Much of what we know about the history of life on Earth comes from the study of fossils
1. Broad Patterns
2. A Changing Earth?
Term
Broad Pattern
Definition
1. Simpler forms in lower strata, more complex forms in upper strata
2. Fossils show that many changes suddenly appear; gradual changes are relatively rare; punctuated equilibrium
3. Rapid rates of evolution have been suggested to occur when changes in the physical or biological environment create conditions that favor new traits
4. Emergence of novel features
Term
Punctuated Equilibrium
Definition
Cambrian "explosion" & transitional forms
Term
Emergence of novel features
Definition
Truly novel features of organisms appear infrequently; Most changes in fossil organisms involve alterations of structures that already exist in organisms from lower strata
Term
A Changing Earth?
Definition
1. Sea levels
2. Advancing and retreating glaciers
3. Atmospheric composition
4. Temperature
5. Continental Drift
6. Meteorite impacts
7. Volcanic activity
8. Changes due to activities of organisms (photosynthesis)
9. Local climate changes
Term
Examples of the Fossil Record
Definition
1. Fishapod
2. Oysters
Term
Fishapods (Tiktaalik roseae)
Definition
1. Suggested to be "transitional form" between fish and tetrapods; provided link between earlier and later forms
2. Had broad skull, flexible neck, eyes on top, primitive wrist, & 5 fingers
3. Eye position would allow peeking about water to look for prey
Term
Oysters
Definition
1. Fossil evidence suggests that, 200 mya, some oysters underwent shell changes
2. Smaller, curved shells were superseded by larger, flatter shells
3. Hypothesis: Flatter shells are more stable in disruptive water currents and so were better adapted if water currents became stronger
Term
Biogeography
Definition
1. Study of the geographical distribution of extinct and modern species
2. Isolated continents and island groups have evolved their own distinct plant & animal communities
3. Geological change may foster separation of populations, set up distinct selection conditions
Term
Study of the geographical distribution of extinct & modern species
Definition
1. Extinct species fossil distributions
2. Modern species distributions
Term
Isolated continents and island groups have evolved their own distinct plant & animal communities
Definition
1. Immigration of initial populations, then divergence
2. Island species resemble those found on closest mainland, with adaptational changes
Term
Convergent Evolution
Definition
2 different species from different theoretical ancestral lineages show similar characteristics, occupy similar environments
Term
Examples of proposed convergent traits
Definition
1. Giant anteater and echidna both have long snouts and tongues to feed on ants
2. Aerial rootlets for clinging to English ivy and wintercreeper
3. Overall body form of dolphins and fish
4. Antifreeze proteins in different very cold water fish
Term
The concept of homology
Definition
1. Similarities between organisms attributed to common evolutionary ancestor
2. Many different categories of homology have been used to establish relationships between species
Term
Types of homology
Definition
1. Anatomical Homology
2. Developmental Homology
3. Molecular Homology
4. Genetic Homology
Term
Anatomical Homology
Definition
Homologous structures are structures in different species that are proposed to be derived from a common ancestor
Term
Examples of Anatomical Homology
Definition
1. Same set of bones in the limbs of modern vertebrates proposed to have undergone evolutionary change to be used for many different purposes
2. Vestigial structures are anatomical structures that have highly reduced or no apparent current function (but resemble functional structures of presumed ancestors)
Term
Vestigial structures
Definition
1. Ear wiggling muscles, tailbone, appendix in humans
2. Pelvic bones in some snakes & whales
Term
Developmental Homology
Definition
Species that differ as adults often bear significant similarities during embryonic stages
Term
Examples of Developmental Homology
Definition
1. Notochord in all chordates
2. Presence of branchial arches (gill ridges) in human embryos and fish embryos suggests common ancestor
3. Teeth in embryonic baleen whales
4. Long bony tails present in human embryos
Term
Molecular Homology
Definition
1. Similarities in cells at the molecular level suggest to some that living species evolved from a common ancestor or interrelated group of common ancestors
2. All living species use DNA to store information
3. Certain biochemical pathways are found in all or nearly all species
Term
All living species use DNA to store information
Definition
Similar DNA (or amino acid) sequences that are thought to be inherited from a common ancestor are referred to as homologous
Term
Certain biochemical pathways are found in all or nearly all species
Definition
Glycolysis pathway, Kreb's cycle
Term
Genetic Homology
Definition
1. Homologous genes-2 genes derived from the same ancestral gene
2. 2 sequences may be similar overall due to the same ancestral gene but not identical due to the independent accumulation of mutations over time
Term
Homologous genes
Definition
May reveal possible molecular details of evolutionary change
Term
2 sequences may be similar overall due to the same ancestral gene but not identical due to the independent accumulation of mutations over time
Definition
The longer the time since the hypothetical common ancestor, the greater the divergence
Term
The concept of species
Definition
1. Known number of species: about 1.4 million
2. Estimates of unidentified species range from 2 to 100 million
3. Difficulty in identifying a "species"
Term
Difficulty in identifying a "species"
Definition
A single species may exist in 2 distinct populations that may be thought to be in the slow process of evolving into 2 or more distinct species
Term
Ways of Defining Species
Definition
1. Morphological Species Concept
2. Biological Species Concept
3. Evolutionary/Phylogenetic Species Concept
4. Ecological Species Concept
Term
Morphological Species Concept
Definition
1. Species are identified by having a unique combination fo physical traits
2. Historically, emphasized physical traits, but now extended to include DNA/protein sequence traits
Term
Advantage of Morphological Species Concept
Definition
1. Can be applied to all organisms, both asexual and sexually reproducing
2. Can be applied to extinct organisms
Term
Drawbacks of Morphological Species Concept
Definition
1. How many/which traits should be considered?
2. Traits often vary in a continuous way, so where to draw the line?
3. Members of the same species can look very different while members of a different species (defined in other ways) can look very similar
Term
Biological Species Concept
Definition
1. A species is a group of individuals whose members have the potential to interbreed with one another in nature to produce viable, fertile offspring but cannot successfully interbreed with members of other species
2. Defined by reproductive isolation in natural environments (hybrids may be possible in artificial environments such as the laboratory or zoos)
Term
2 problems of Biological Species Concept
Definition
1. May be difficult to determine if 2 populations are truly reproductively isolated
2. Cannot be applied to asexual species, or extinct species
Term
Evolutionary/Phylogenetic Species Concept
Definition
A species is derived from a single lineage that is distinct from other lineages and has its own evolutionary tendencies and historical fate
Term
Lineage
Definition
Genetic relationship between an individual or group of individuals and its ancestors
Term
Drawbacks to Evolutionary/Phylogenetic Species Concept
Definition
Lineages difficult to examine and identity; often times controversial
Term
Ecological Species Concept
Definition
1. Each species occupies a unique ecological niche
2. Within their own niche, members of a given species compete with each other for survival
Term
Each species occupies a unique ecological niche
Definition
Unique set of habitat resources that a species requires, as well as its influence on the environment and other species
Term
Within their own niche, members of a given species compete with each other for survival
Definition
1. If 2 organisms are very similar, their needs will overlap, which results in competition
2. Such competing individuals are likely to be of the same species
3. Useful for identification of asexually reproducing species, such as bacterial or protist species
Term
Drawbacks to Ecological Species Concept
Definition
1. Depends on how fully the niche, needs of the organisms are known
2. Convergent Evolution?
Term
Plant Diversity Overview
Definition
1. By far, flowering plants make up the most diverse plant division
2. More flowering plant species than all others combined
3. All Plants exhibit "alternation of generations"
Term
"Alternation of generations"
Definition
Sequence in a life cycle in which a haploid, gamete-producing phase is followed by a diploid, spore-producing phase; the spores of the latter reinitiate the haploid phase
Term
Gametophyte (haploid)
Definition
1. Microscopic in flowering plants
2. Produce gametes by mitosis
Term
Sporophyte (diploid)
Definition
1. In flowering plants, large, independent, recognizable "plant"
2. Produces spores by meiosis
Term
Flowering Plant Reproductive Development
Definition
1. Mature flowering plants produce seeds and fruits
2. Flower tissues enclose and protect tiny male & female gametophytes
3. Fruits enclose seeds and function in seed dispersal
4. Seeds enclose plant embryos
Term
Seed-to-seed lifetime
Definition
1. Annuals
2. Biennials
3. Perennials
Term
Annuals
Definition
plants that die after producing seeds during their 1st year of life
Term
Biennials
Definition
plants that do not reproduce the 1st year but may the following year
Term
Perennials
Definition
plants that live for more than 2 years, often producing seed every year after maturity
Term
Growth & Development of Plants
Definition
1. Four Essential Processes
2. Additional principles included
Term
Four essential processes
Definition
1. Cell division, growth, cell specialization, & apoptosis
2. Cell migration does not occur during development of plants (unlike animals)-cells mature, differentiate where they are laid down
Term
Additional principles include
Definition
1. Development & maintenance of a distinctive architecture throughout life
2. Maintenance of a population of stem cells in meristems
3. Growth by expansion of cells in controlled directions, by water uptake
Term
Maintenance of a population of stem cells in meristems
Definition
Meristematic stem cells divide to renew meristem, and leave cells behind to differentiate
Term
Meristems
Definition
1. Apical Meristems
2. Primary Meristems
3. Secondary Meristems
Term
Apical Meristems
Definition
1. Shoot apical meristem (SAM)
2. Root apical meristem (RAM)
Term
Shoot apical meristem
Definition
1. Rapidly dividing cells at shoot tips and branch
2. Produces shoot system
Term
Shoot system
Definition
stems, branches, leaves, and other organ systems
Term
Root apical meristem
Definition
1. Rapidly dividing cells at root tips
2. Produces root systems
Term
Root system
Definition
roots and root branches
Term
Primary Meristems
Definition
SAM & RAM produce additional meristematic tissues (primary meristems) that produce the specialized cell types that produce new tissues & organs
Term
Three types of Primary Meristems
Definition
1. Protoderm
2. Procambium
3. Ground meristem
Term
Protoderm
Definition
generates epidermis
Term
Procambium
Definition
produces vascular tissues (primary xylem & phloem)
Term
Ground meristem
Definition
produces ground tissues (cortex, pith)
Term
Secondary Meristems
Definition
Surround the established stem of a plant & cause it to grow laterally (i.e. larger in girth/diameter)
1. vascular cambium
2. cork cambium
Term
Key Feature of Meristems
Definition
1. Plant meristems contain stem cells that remain undifferentiated but can produce new cells capable of differentiating into specialized tissues
2. Plant stem cell divides to produce one cell that remains unspecialized and another cell that is capable of differentiating into various types of specialized cells
Term
Plant Cell Expansion
Definition
1. Growth involves producing new cells & cell expansion
2. Expansion occurs when water enters the central vacuole by osmosis-allows rapid plant growth
Term
General functions/characteristics
Definition
1. Main photosynthetic systems
2. Site of gas exchange-susceptible to water loss, drying
Term
Leaf adaptations/specialization
Definition
1. Leaf form
2. Leaf venation
3. Leaf surface features
4. Modified leaves
Term
Leaf form
Definition
1. simple leaves
2. complex or compound leaves
Term
Simple leaves
Definition
only one blade, advantageous in shade by providing maximal light absorption
Term
Complex or compound leaves
Definition
dissected into leaflets, common in hot environments for heat dissipation
Term
Leaf venation
Definition
Eudicot leaves have pinnate or palmate venation-netted veins with branching patterns provide more support to the leaf
Term
Leaf surface features
Definition
1. Cuticle on epidermis helps with various things
2. Guard cells regulate stomatal opening and closing
3. Trichomes offer protection from excessive light, ultraviolet radiation, extreme air temperature, or attack by herbivores
Term
Cuticle on epidermis helps
Definition
1. Avoid desiccation
2. Filter UV radiation
3. Reduce microbe and animal attack
Term
Modified Leaves
Definition
Most leaves function primarily in photosynthesis
Term
Modified leaves can be modified for other roles
Definition
1. Tendrils
2. Tough scales that protect buds
3. Poinsettia "petals"
4. Cactus spines
Term
General functions/characteristics of leaves
Definition
1. Supports for the plant body
2. Carries nutrients throughout plant (in vascular tissues)
3. Defense system to protect against predators & infection
4. Few millimeters to 100 meters length
5. Produce leaves, branches, & flowers
6. Hold leaves up
7. May function in storage and photosynthesis
8. Contain nodes-attachment for leaves & branches
9. Internodes-regions between the nodes
10. Buds-contain meristematic tissue, areas of growth (stems, leaves, flowers)
Term
Stem vascular tissue
Definition
1. Primary vascular tissue
2. Secondary vascular tissue
Term
Primary vascular tissue
Definition
derived from primary meristem (procambium)
Term
Secondary vascular tissue
Definition
derived from secondary meristem (vascular cambium)
Term
Herbaceous vascular tissue
Definition
1. Non-woody
2. Plants produce mostly primary vascular tissues
Term
Woody vascular tissue
Definition
1. Produce primary and secondary vascular tissue
2. Woody plants begin as herbaceous seedling with only primary vascular systems
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