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Energy and Photosynthesis
Terms associated with Photosynthesis and Metabolism
181
Biology
Undergraduate 1
10/11/2013

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Term
Metabolic Pathway
Definition
Enzyme-mediated reaction or pathway, can be exergonic or endergonic
Term
ATP
Definition
The charged up main energy for your body uses, consists of a nucleotide bade, 5-carbon sugar, and three phosphate tail
Term
ADP
Definition
The uncharged batter form that has only 2 phosphates on its tail, a 5-carbon sugar, and a nucleotide base
Term
Endergonic Reaction
Definition
Energy reaction that requires energy input
Term
Exergonic Reaction
Definition
Energy reaction that gives off energy
Term
1st Law of Thermodynamics
Definition
Energy cannot be created nor destroyed
Term
Enzyme
Definition
A type of protein that speeds up a chemical reaction by lowering activation energy
Term
Induced-fit Model
Definition
As a substrate binds to an active sit, it changes the enzyme's shape to make a better fit and promote chemical change
Term
Active Site
Definition
Part of an enzyme where enzyme interacts with its substrate
Term
Substrate
Definition
Reactant for a specific enzyme-mediated reaction
Term
Activation Energy
Definition
The minimum amount of energy required to start a reaction
Term
Products
Definition
The end result of a chemical reaction
Term
2nd Law of Thermodynamics
Definition
In any energy transfer, you wind up with a lower quality energy form
Term
Reactants
Definition
The starting ingredients that go into a chemical reaction
Term
Chemical Equilibrium
Definition
In a reversible reaction, the time at which the reaction is running at the same pace in both directions
Term
Intermediates
Definition
Any substance formed between the start and conclusion of a pathway
Term
Autograph
Definition
Organism that is capable of making its own food
Term
Chloroplast
Definition
Organelle where photosynthesis occurs
Term
Krebbs Cycle
Definition
2nd stage of respiration
Term
Photosynthesis
Definition
Combination of water, Carbon Dioxide and light engery to produce sugar
Term
Aerobic Respiration
Definition
burning fuels without oxygen
Term
Stomtata
Definition
Pores in a leaf that allow gas exchange
Term
Pigment
Definition
Light absorbing chemical
Term
Electron Transport System
Definition
A series of proteins that carry electrons to convert ADP to ATP
Term
Alcoholic Fermintation
Definition
Type of anearobic respiration that creates alcohol as a waste product
Term
Alcoholic Fermintation
Definition
type of fermination that occurs in plants
Term
Glysolysis
Definition
First stage of cellular respiration; the breaking of glucose
Term
Cellular Repsiration
Definition
Cellular breakdown of glucose to release energy
Term
Light dependent reaction
Definition
first stage of photosynthesis; aka photolysis
Term
Calvin Cycle/ Lt. independent reaction
Definition
second stage of photosynthesis; also called the DARK cycle
Term
Stroma
Definition
liquid portion of chloroplasts
Term
ATP/ Adenosine Triphosphate
Definition
chemical in organisms used to store and release energy
Term
Heterotroph
Definition
Organism NOT capable of making its own food
Term
Chlorophyll
Definition
Pigment in plants that collects light engery
Term
NAD
Definition
Coenzyme molecule that accepts electrons in chlorophyll and becomes a charged battery
Term
ATP synthase
Definition
Protein that converts ADP to ATP
Term
Thylakoid
Definition
Stack of membranes where photosynthesis occurs in chlorplasts
Term
lactate Fermintation
Definition
type of fermintation that occurs in animals and produces muscle cramps
Term
NADP
Definition
Coenzyme molecule that accepts electrons in chlorophyll and becomes a charged battery
Term
Biochemical Pathway
Definition
A series of reactions where the product of one reaction is used in the next reaction
Term
Thylakiods
Definition
Disk in a chloroplast where photosynthesis takes place
Term
Grana
Definition
Stacks of thylakiod disks
Term
Stroma
Definition
Fluid in the chloroplast that surrounds the thylakoids, - Where the calvin cycle takes place
Term
Chlorophyll a
Definition
the main light harvesting pigment in photosyntheis
Term
Chlorophyll b
Definition
an accessory pigment that stores up light energy
Term
Carotenoids
Definition
An accessory pigment that stores up light energy, gives the plant different colors besides green
Term
Accessory pigments
Definition
Pigments that store light energy
Term
Stomata
Definition
The openings in leaves that take in H2O and CO2, and let out O2
Term
C4 plants
Definition
Plants that change CO2 into 4-carbon compounds and store up the carbon to be used later in the calvin cycle
Term
CAM plants
Definition
Plants that change CO2 into a variety of carbon compounds and store up the carbon to be used later in the calvin cycle
Term
Step 1 of photosynthesis
Definition
Light excites electrons in photosystem II, electrons are moved to the electron transport chain, electrons in PSII are replaced by splitting water.
Term
Step 2 of photosynthesis
Definition
electrons move down the electron transport chain and lose energy, this energy is used to pump protons inside the thylakoid disk
Term
Step 3 of photosynthesis
Definition
Photosystem I absorbs light an excites electrons. The electrons from photosystem II replace the excited electrons in photosystem I
Term
Step 4 of photosynthesis
Definition
Photosystem I sends excited electron to another electron transport chain and the energy from those electrons are used to make NADPH
Term
Step 5 of photosynthesis
Definition
The protons that were pumped into the thylakoid are used by ATP Synthase to make ATP
Term
Rates of photosynthesis affected by CO2 and water
Definition
as CO2, and H20 levels increase, the rate of photosynthesis increases until it levels off
Term
Rates of photosynthesis affected by Temperature
Definition
as the temperature increases photosynthesis increases until a certain point then photosynthesis drops off
Term
Step 1 of calvin cycle
Definition
CO2 combines with 5-carbon RuBP to make 2 PGA molecules
Term
Step 2 of calvin cycle
Definition
PGA molecules combine with ATP and NADPH to make 2 PGAL molecules
Term
Step 3 of calvin cycle
Definition
Most PGAL molecules combine with ATP to re-make RuBP, some is used to make sugar
Term
What is the overall reaction for photosynthesis
Definition
CO2 + H2O + light = sugar + O2
Term
Why do C4 and CAM plants need an alternative method for fixing carbon?
Definition
They are in dry and hot environments so they close their stomata to prevent water loss. Because of the closed stomata, they must store up Carbon to be used later
Term
What are the two energy carring molecules that are made in photosynthesis and are used in the Calvin Cycle?
Definition
NADPH and ATP
Term
6H2O + 6CO2 --> C6H12O6 + 602
Definition
Balanced equation for photosynthesis.
Term
C6H12O6 + 602 --> 6CO2 + 6H2O
Definition
Balanced equation for cell respiration.
Term
During cell respiration, what is both produced and measured?
Definition
CO2.
Term
During photosynthesis, what is both consumed and measured?
Definition
CO2.
Term
The effects of cell respiration can be studied when leaves are in the _____.
Definition
Dark (while there is no photosynthesis uptake of carbon dioxide).
Term
During the light, which reaction(s) are occuring?
Definition
Both photosynthesis and cell respiration.
Term
Which reaction is carried out at all times?
Definition
Cell respiration.
Term
When does photosynthesis occur?
Definition
When green plant cells are exposed to LIGHT.
Term
How do we find cell respiration?
Definition
Total in light - total in dark.
Term
How is the presence of photosynthesis tested?
Definition
INDIRECTLY by using IKI Test for starch.
Term
The presence of starch identified by IKI is an indirect indicator of _______.
Definition
Photosynthesis.
Term
Photosynthesis requires which type of Chlorophyll?
Definition
Chlorophyll A.
Term
Why does photosynthesis require Chlorophyll A?
Definition
Green areas of leaf contain Chlor. A and that is where most photo occurs/starch is found.
Term
What is the red pigment?
Definition
Anthocyanin.
Term
Anthocyanin is water soluble because ______.
Definition
Red pigment can be removed by boiling water.
Term
Do white areas on leaves have pigment?
Definition
No.
Term
What pigments makes up the brick color in a Coleus leaf?
Definition
Both anthocyanin and Chlorophyll.
Term
Is Chlorophyll water soluble like Anthocyanin?
Definition
No.
Term
What will remove the green color in a Coleus leaf?
Definition
Boiling Alcohol.
Term
What is the main photosynthetic pigment?
Definition
Chlorophyll A.
Term
What are the antenna pigments?
Definition
Chorophyll B, carotenes and xanthophylls.
Term
What is the technique to separate a mixture of solutes in same solution?
Definition
Paper chromotography.
Term
How does solvent move up on paper during paper chromotography?
Definition
By capillary action (adhesion + cohesion).
Term
Why do pigments move at different rates during paper chromotography?
Definition
1) Size of pigment
Term
What does the absorption spectrum plot?
Definition
Wavelength of light (nm) vs. absorption
Term
On an absorption spectrum plot, which axis is the Wavelength of light?
Definition
X Axis.
Term
On an absorption spectrum plot, which axis is the absorption?
Definition
Y Axis.
Term
What machine is used to measure absorption spectrum?
Definition
Spectrophotometer.
Term
How is pigment extracted from chromotography strips?
Definition
By using acetone.
Term
On spectrophotometer, it is set to 100% only for ____.
Definition
Acetone.
Term
What is the color range associated with the wavelengths 400 - 700 nanometers (nm)?
Definition
Color range of violet through red.
Term
The visible colors from shortest to longest wavelength.
Definition
VIB G. YOR
Term
The visible colors from longest to shortest wavelength.
Definition
ROY G. BIV
Term
During photosynthesis, what color light is NOT absorbed and is reflected back?
Definition
Green light.
Term
Name the order of pigments from furthest to nearest.
Definition
Carotene, xanthophylls, chlorophyll a, lastly chlorophyll b.
Term
Why do leaves change color in autumn?
Definition
Because pigments are replaced in PLASTIDS.
Term
Which color lights are best for photosynthesis?
Definition
Red and blue.
Term
What do plants change carbon dioxide molecules into?
Definition
Organic molecules (PGAL).
Term
What are the components that plants must have in order to complete photosynthesis?
Definition
Chlorophyll A, ETS, and antenna pigments.
Term
What is the first stage of photosynthesis?
Definition
Light dependent reaction.
Term
Light dependent reactions are powered by ______.
Definition
Light.
Term
During Light dependent reaction, what is the splitting of water called?
Definition
Photolysis.
Term
During Light dependent reaction, what is given off from photolysis?
Definition
Oxygen gas and hydrogens.
Term
What are the two most important products during light dependent reaction?
Definition
ATP and NADPH.
Term
Where does the light dependent reaction take place?
Definition
In the Thylakoid Membrane (specific part of chloroplast)
Term
What is the second stage of Photosynthesis called?
Definition
Light independent reaction / Dark Cycle.
Term
What compound does the light independent reaction / dark cycle start and end with?
Definition
RuDP; it is recycled.
Term
What is the most important result during Light independent reaction / dark cycle?
Definition
Carbon Fixation.
Term
Why is carbon fixation so important?
Definition
It is used to form PGAL molecules.
Term
What are PGAL molecules used to make?
Definition
Glucose.
Term
Where does the Light Independent Reaction / Dark Cycle occur?
Definition
In the stroma (of chloroplast).
Term
When NADP accepts an electron, we say that is has been __________.
Definition
Reduced.
Term
Photosynthesis is what type of reaction?
Definition
Anabolism.
Term
Other than photosynthetic organsims, the only autotrophs are ______.
Definition
Chemoautotrophs.
Term
Over the life of the plant, would it photosynthesize more or respire more?
Definition
Respire...cell respiration occurs 24 hours a day.
Term
what is photosynthesis
Definition
converting solar energy into chemical energy
Term
what is a oxidation reduction reaction
Definition
transferring of electrons from one molecule to the next
Term
exergonic reaction
Definition
when energy is released
Term
endergonic reaction
Definition
energy is absorbed( photosynthesis)
Term
coenzymes
Definition
electron taxis, transfer energy of electrons from one molecule to another
Term
Adenosine Triphosphate
Definition
ATP- temporary energy storage in the body
Term
Chemiosomsis
Definition
proton pumped across a membrane low to high....when gradient breaks protons rush down the concentration gradient and across ATP synthase, providing energy for the addition of a phosphate group make ADP become APT
Term
photosynthesis chemical equation
Definition
6CO2+ 6H2O+ sunlight--> 6C6H12O6 + 6O2
Term
choloroplast
Definition
where photosynthesis occurs
Term
thylakoids
Definition
green membrane sacks
Term
stroma
Definition
liquid matrix that fills the thylakoids like cytoplasm fills the cell
Term
granum
Definition
stacks of thyalkoids
Term
chlorophyll A
Definition
main pigment
Term
chlorophyll B
Definition
secondary pigment reflects green
Term
carationoids
Definition
accessory/ antenna pigments (not green) orange, red, yellow, brown( FALL)
Term
function of pigment in photosynthesis?
Definition
collect energy
Term
how are pigments arranged
Definition
in groups called photosystems in the thylakoid membrane
Term
light reaction
Definition
occurs in the thylakoid membranes
Term
photosystem 2
Definition
solar energy from the sun is absorbed by chlorophyll A
Term
what happens when the sun is absorbed in light reaction
Definition
the electrons get super excited and leave and go to a higher energy level
Term
what happens when the excited electrons go to a higher energy level in a light reaction in photosystem 2
Definition
The electrons leave chlorophyll A and are passed along an electron transport chain which provides energy to pump protons into the thylakoid for chemiosmosis
Term
what is
Definition
it means that water was split by the excited electrons and gas is released as a product
Term
what happens when to the electrons lost in phosotsytem 2
Definition
they are replaced by electrons in water
Term
what happens to the protons released in the splitting of water in photosystem 2
Definition
they are used for chemiosmosis
Term
photosystem 1
Definition
solar energy absorbed by chlorophyll
Term
what happens in photosystem 1?
Definition
excited electrons enter an electron transport chain, where they then join with a proton and picked up by NADP and then formed into NADPH
Term
how are electrons replaced in phosotystem 1
Definition
by photosystem 2
Term
products of light reactions
Definition
NADPH and ATP....used in calvin cycle
Term
what happens when the excited electrons go to a higher energy level in a light reaction
Definition
The electrons leave chlorophyll A and are passed along an electron transport chain which provides energy to pump protons into the thylakoid for chemiosmosis
Term
what is
Definition
it means that water was split by the excited electrons and gas is released as a product
Term
what happens when to the electrons lost in phosotsytem 2
Definition
they are replaced by electrons in water
Term
what happens to the protons released in the splitting of water in photosystem 2
Definition
they are used for chemiosmosis
Term
photosystem 1
Definition
solar energy absorbed by chlorophyll
Term
what happens in photosystem 1?
Definition
excited electrons enter an electron transport chain, where they then join with a proton and picked up by NADP and then formed into NADPH
Term
how are electrons replaced in phosotystem 1
Definition
by photosystem 2
Term
products of light reactions
Definition
NADPH and ATP....used in calvin cycle
Term
what happens to the carbon that diffuses into the stoma
Definition
its is picked up by 5 other carbon called RUBP by action of enzyme called RUBISCO and is then split into 2 3-carbon comopund
Term
what is it called when ATP and NADPH and these 3- carbon compounds form glucose
Definition
carbon fixation
Term
another name for calvin cycle?
Definition
dark reaction
Term
why cant all 6 molecules be released into glucose?
Definition
5 must be remade into RUBP
Term
alternate pathways live where?
Definition
in hot or dry areas
Term
how do alternate pathway plants conserve water?
Definition
they close their stoma for the hottest part of the day
Term
why can a plant closing their stoma be a bad thing?
Definition
CO2 cant get in and O2 cant get out causing enzymes to change shape and stop photosynthesis
Term
what are the differences in C3, C4, and CAM
Definition
entail products of calvin cycle
Term
how long will intensity in photosynthesis increase?
Definition
as long as light energy increase so will the rate of photosynthesis, until reaches 99 degrease F then photosynthesis will stop
Term
what happens to the carbon that diffuses into the stoma
Definition
its is picked up by 5 other carbon called RUBP by action of enzyme called RUBISCO and is then split into 2 3-carbon comopund
Term
what is it called when ATP and NADPH and these 3- carbon compounds form glucose
Definition
carbon fixation
Term
another name for calvin cycle?
Definition
dark reaction
Term
why cant all 6 molecules be released into glucose?
Definition
5 must be remade into RUBP
Term
alternate pathways live where?
Definition
in hot or dry areas
Term
how do alternate pathway plants conserve water?
Definition
they close their stoma for the hottest part of the day
Term
why can a plant closing their stoma be a bad thing?
Definition
CO2 cant get in and O2 cant get out causing enzymes to change shape and stop photosynthesis
Term
what are the differences in C3, C4, and CAM
Definition
entail products of calvin cycle
Term
how long will intensity in photosynthesis increase?
Definition
as long as light energy increase so will the rate of photosynthesis, until reaches 99 degrease F then photosynthesis will stop
Term
what happens to the carbon that diffuses into the stoma
Definition
its is picked up by 5 other carbon called RUBP by action of enzyme called RUBISCO and is then split into 2 3-carbon comopund
Term
what is it called when ATP and NADPH and these 3- carbon compounds form glucose
Definition
carbon fixation
Term
another name for calvin cycle?
Definition
dark reaction
Term
why cant all 6 molecules be released into glucose?
Definition
5 must be remade into RUBP
Term
alternate pathways live where?
Definition
in hot or dry areas
Term
how do alternate pathway plants conserve water?
Definition
they close their stoma for the hottest part of the day
Term
why can a plant closing their stoma be a bad thing?
Definition
CO2 cant get in and O2 cant get out causing enzymes to change shape and stop photosynthesis
Term
what are the differences in C3, C4, and CAM
Definition
entail products of calvin cycle
Term
how long will intensity in photosynthesis increase?
Definition
as long as light energy increase so will the rate of photosynthesis, until reaches 99 degrease F then photosynthesis will stop
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