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Developmental Biology Exam 1
embryology
89
Biology
Undergraduate 3
10/24/2011

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Term
TBP
Definition
TATA binding protein. One of the proteins required to properly place polymerase onto the promoter region
Term
TF II D
Definition
Recruits the polymerase to TBP
Term
Promoter region
Definition
Responsible for binding of RNA TATA box. polymerase and for the initiation of transcription
Term
Translation termination codon
Definition
TAA with poly A tail
Term
Transcription termination codon
Definition
AATAA
Term
Solenoids
Definition
Nucleosomes are bound into "solinoids" and stabilized by the H1 histone.
This tight packaging of nucleosomes prevents transcription of gene in somatic cells by blocking transcription factors and RNA polymerase
Term
Histone Deacetylases
Definition
Stablize nucleosomes and prevent transcription
Term
Transcription Initiation site
Definition
CAP secquence from the 5 prime end
Term
Translation initiation site
Definition
AUG
Term
Neural Crest
Definition
Transient band of cells that joins the neural tube to the epidermis
Term
Somatic Nuclear Transfer (cloning)
Definition
A blastula cell nuclei can direct the development of complete taldpoles when transferred into the cytopasm of an
activated enucleated from egg
Cannot generate adult frogs
Term
momparative Embryology
Definition
Study of how anatomy changes during the development of different organisms
Term
Vitelline Envelope
Definition
Species specific binding.
Term
Egg Jelly
Definition
Attracts and activates sperm
Term
Zona Pellucida
Definition
External protective maxtric in humans it's like the vitelline layer
Term
Cumulus
Definition
Follicular cells that nurured egg during release from ovary
Term
Corona Radiata
Definition
Inner most layer of culumus
Term
Selective Affinity
Definition
The inner surface of the ectoderm has a positive affinity for mesodermal cells and a negative affinity for the endoderm. The mesoderm has a positive affinity for both
Term
Differential Adhersion hypothesis
Definition
Cells sort based on the most thermodynamically staable pattern
Term
Cadherins
Definition
Calcium dependent adhesion molecules that adhere cells together, link to and help assemble actin cytoskeleton, and helps with signaling molecules that change a cell's gene expression
Term
Catenins
Definition
Anchor cadherins inside cell
Term
Trophoblast
Definition
Outter cells of a human egg that bind to the uterus. Contains E cadherin and P cadherin
Term
Innermast cells
Definition
Cells that will generate the embryo and become the organism
Term
Stages of cell migration
Definition
1.) Polarization: determines front from back
2.) Protrusionj of cell's leading edge with force from polymerization of actin microfiliments
3.) Adhesion of the cells to the extracellular substrate pushing on the ECM
Release of adhesions in the rear and allowing the cell to migrate in the forward direction.
Term
Histone Acetyltransferase
Definition
Places acetyl group onto histones H3 and H4 disabling them the nucleosomes so they come apart easily.
Term
Fast block
Definition
Changing of the electric potiental of the egg cells membrane to +20 disallowing sperm to adhere.
Term
Cortical Granual reaction
Definition
Slow mechanical block to polyspermy that becomes active after one minute of sperm fusion
Term
Resact
Definition
14 AA peptide that diffuses from egg jelly into sea water and attracts sperm
Term
Evolutionary biology
Definition
Study of how changes in development may cause evolutionary changes and how the ancestry may constrain type of changes that are possible.
Term
Ectoderm
Definition
Epidermis and nervous system
Term
Endoderm
Definition
Produces the epithlium of lungs and GI
Term
Mesoderm
Definition
Generates blood, heart, kidneys, gonads, bones, muslce and connective tissue
Term
The three postulates of differential gene expression
Definition
1.) Every cell's nucleus has the complete set of DNA in the egg
2.) Unused genes keep potiental for expression
3.) Only a small portion of the genome is expressed in each cell.
Term
Enhancer
Definition
DNA secquence that controls the effiency and rate of transcription
Term
Fusion of egg and sperm in the sea urchin
Definition
Contact with Jelly layer, acrosome reaction, digestion of jelly layer, Binding to vitilline layer, Fusion of acrosomal process membrane and egg membrane
Term
Fertilization cone
Definition
The fusion of sperm and egg causes polymerization of actin in the egg
Term
Cortical granuale
Definition
Cleaves protein posts that connect the vitelline layer proteins to cell membrane and cuts off bindin receptors with any attached sperm
Term
Cis Regulatory elements
Definition
Enhancers that can only regulate "cis linked" elements can be on 3', 5' or intron
Term
Trithorax
Definition
Counteracts the effects of polycomb
Term
Polycomb
Definition
Bind to condensed nucleosomes and keep the gene in an inactive state
Term
Transcription associated factors
Definition
TAF stablizie the RNA polymerase onto the promoter region and inable transcription.
Term
DNA binding domain
Definition
Term
DNA Binding domain
Definition
Recognizes a particular DNA secquence in the enhancer
Term
Trans activating domain
Definition
activates or suppresses transcription of the gene whose promoter or enhancer has been boudn.
Term
Protein - Protein interaction domain
Definition
allows the transcription factors activity to be modulated by TAFs
Term
Coordinated Gene expression
Definition
Simultaneous expression of many cell specific genes
Term
Instructive interatction
Definition
Signal is required to initiate gene expression
Term
Peruissive expression
Definition
responding to tissue is only need the proper enviornment to allow expression.
Term
notochord
Definition
A rod of mesodermal cells in the most dorsal portion of the embryo. These cells instead become the nervous system
Term
How is metamorphesis initiated in the frog
Definition
By hormones from the tadpoles thyroid gland
Term
How is metamorphesis initiated in the frog
Definition
By hormones from the tadpoles thyroid gland
Term
Holoblastic
Definition
Little or no yoke:
1.) Isolecithal: evevly distributed yoke
Spiral, bilateral, rotational
2.) Mesolecithal:Moderate yolk
Displaced radial cleavage
3.) Telolecithal: Dense yolk
Bilateral and discodal cleavage
4.) Centrolecithal : yolk in center
Superficial cleavage
Term
meroblastic
Definition
Pattern of cleavage where only a portion of the egg is destined to become the embryo and the other portion become the yoke or nutrition for the embryo
Term
Von Baer's laws (4)
Definition
1.) General features apper first then more specialized features develop

2.) Less general features develop from the more general

3.) The embryo of different species does not move through the same stages as the lower animals, instead it grows looking much less alike

4.) The early embryo of a higher animal never looks like that of a lower animal but perhaps like it's embry
Term
mesenchymal cells
Definition
unconnected to one another and operate as indpendent units
Term
histone acetylation
Definition
Additoinal of negatively charged acetyl group to histones which neutralizes the charge of lysine and loosens the histones.
Term
Neural restrictive silence element
Definition
Found in mouse genes whose expression is limited to the nervous system
Term
Silencers
Definition
DNA regulatory elelments that actively repress the transcription of a particular gene
Term
Splicing isoforms
Definition
Different proteins that are encoded by the same gene. This change occurs as a result of splicing.
Term
Alternative nRNA splicing
Definition
producing a wide variety of proteins from the same gene
Term
Proteome
Definition
The number and type of proteins encoded by the genome
Term
juxtacrine interactions
Definition
A cell membrane protein on one cell surface interacts with the receptor proteins on adjacent cell surfaces.
Term
juxtacrine interactions
Definition
A cell membrane protein on one cell surface interacts with the receptor proteins on adjacent cell surfaces.
Term
Hedgehog pathway
Definition
Bind to a receptor called patched. Patched binds to a signal transducer (smoothened) and prevents smoothened from functioning. Without hedgehog pathway, the smoothended is inactiveand the Ci protein is tethered to the microtubules of the reponding cell. It is then cleaved and acts as a transcriptional repressor. with active smoothened, Ci will enter the nuculus whole and act as a activator.
Term
What is the hedge hog pathway responsible for?
Definition
Formation in the chick embryo for feather formation in chicks and hair formation in humans.
Term
Mosaic embryo
Definition
Each cell recieves it's instruciton independently without cell to cell interactions.
Term
Germ plasm theory
Definition
Each cell of the embryo would develop automously. The sperm and the egg provided equal chromosomal contribution equally to the organism.
Term
Weismann's hypothesis of development
Definition
There are a seperation of right and left determinants in the resulting blastomeres.
Term
Driesch's hypothesis of development
Definition
The seperated cells will produce smaller version of a complete embryo.
Term
Does cleaving the cell in different areas change the fate of the cell?
Definition
Not if it occurs before the cells are differentiated.
Term
Syncytium
Definition
A cytoplasm that contains many nuclei
Term
Syncytial specification
Definition
Nuclei in the anterior part of the cells will be exposed to cytoplasmic transcription factors that are not present in the posterior part of the cell and vice versa.
Term
Autonomous specification
Definition
Blastomere inherits a set of transcription factors from the egg cytoplasm and these transcription factors regulate gene expression, directs the cell into a path of development. There are different morphogenetic determinants. The cell Knows what it is to become without interaction.
Term
Conditional specification
Definition
ability of cells to achieve their repective fates by interaction with other cells.
Term
Acrosome
Definition
Derived from the golgi apparatus and contains enzymes that digest proteins and complex surgars.
Term
What is the centriole responseible for?
Definition
Structure tail in sperm, microtube organization, and becomes centrisome
Term
Cortex
Definition
region which is stiffer than the internal cytoplasm and contains high concentrationso f globular actin molecules. Contains the egg's cortical granuals which contin hyalin protein.
Term
Corticical granule serine protease
Definition
SAn enzyme that cleaves the protiein posts that connect the vitelline envelopeproteins to the cell membrane and clips off bindin receptors.
Term
Fertilziation Envelope
Definition
Is elevated from the cell membrane by glycosaminoglycans which are released from the cortical granuals. They then absorb water to expand the space between the cell membrane and fertilization evelope.
Term
Hyaline layer
Definition
Extended microvilli extends to hyaline layer that provides support for the blastomere during cleavage.
Term
Actinomycin
Definition
Does not allow transcription
Term
equatorial region
Definition
where membrane fusion between sperm and egg begins
Term
Mitosis promoting factor
Definition
Responseible for resumption of meiotic cell dividison in the ovulated frog egg. Continues to regulate cell cycle of early blastomeres
Term
Sea Urchin cleavage
Definition
Radial holoblastic cleavage:
The first and second are meridonal (pole to pole) and perpendicular to one another.
The third cleavage is equatorial and perpendicular to the first two. This is what seperates the animal into the two hemispheres.
Fourth: The Animal half is divided from four to eight. Mesomeres. The vegetal layer undergose unequal euatorial cleavage and produces four larges cells and four small cells Macromeres and micromeres.
Fifth: The animal section is equally divided again. The vegital section divides the four macromeres leaving a small cluster of micromeres at the bottom.
Term
Invagination
Definition
infolding of cell sheet into embryo
Term
Involution
Definition
Inturning of cell sheet over the basal surfact of an outter layer
Term
Ingression
Definition
Migration of individual cells into the embryo
Term
Delamination
Definition
Splitting or migration of one seet into two
Term
Epibody
Definition
Expansion of one cell sheet over another
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