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Campbell 8th edition
Chapters 16, 17, 18, 19, 20
95
Biology
12th Grade
02/08/2014

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Term
Watson and Crick
Definition
1953, Constructed double-helix model of DNA
Term
How are nucleic acids unique?
Definition
they can direct their own replication
Term
T. H. Morgan
Definition
showed that genes are located on chromosomes--DNA and Proteins became candidates for genetic material
Term
Griffith
Definition
1928, Discovered transformations through rat tests
Term
Avery and Oswald
Definition
searched for transforming factor from Griffith's experiment: RNA, DNA, or protein. inactivated each and found dna to cause transformation
Term
Hershey and Chase
Definition
1952, showed DNA is genetic material through tests with bacteriophages
Term
Hershey and Chase marked what with what?
Definition
DNA with phosphorus and Protein with sulfur
Term
Chargaff
Definition
1947, developed rules to DNA; A=T, C=G, varies between species.
Term
Wilkins and Franklin
Definition
used x-ray crystallography to study DNA structure.
Term
Meselson and Stahl
Definition
labeled pieces of DNA to discover the semiconservative model of DNA replication to be accurate
Term
origins of replication
Definition
sites on DNA molecule where replication begins.
Term
replication forks
Definition
where the parental strands of DNA are being unwound.
Term
helicase
Definition
untwists the double helix and separates DNA strands at replication fork
Term
topoisomerase
Definition
relieves the tighter twisting ahead of the replication fork
Term
single-stranded binding proteins
Definition
keep the unpaired template strands apart during replication
Term
primase
Definition
synthesizes primer, adds nucleotides one as a time using DNA strand as template
Term
DNA Polymerase
Definition
enzymes that catalyze the synthesis of new DNA by adding nucleotides to preexisting chain
Term
okazaki fragments
Definition
a series of short fragments that form the lagging strand
Term
DNA ligase
Definition
eventually joins the sugar-phosphate backbones of okazaki fragments to form DNA strand
Term
mismatch repair
Definition
special enzymes fix incorrectly paired nucleotides
Term
nucleotide excision repair
Definition
nuclease cuts out segment of a damaged strand, resulting gap is filled with nucleotides using undamaged strand as template.
Term
telomeres
Definition
multiple repetitions of nucleotides; protect DNA from eroding after multiple replications
Term
telomerase
Definition
catalyze the lengthening of telomeres, restoring to original length.
Term
heterochromatin
Definition
chromosome material of different density from normal (usually greater), in which the activity of the genes is modified or suppressed.
Term
euchromatin
Definition
chromosome material that does not stain strongly except during cell division. It represents the major genes and is involved in transcription.
Term
Histones
Definition
proteins that dna tightly coils around to form chromosomes.
Term
Gene Expression
Definition
DNA directs synthesis of proteins or RNA molecules involved in protein synthesis. Proteins = link between genotype and phenotype.
Term
RNA vs DNA
Definition
RNA: ribose sugar, uracil, single stranded
DNA: Dioxiribose sugar, thymine, double stranded
Term
Protein Monomers
Definition
amino acids arranged in a particular order
Term
Transcription
Definition
synthesis of RNA under direction of DNA. Nucleic acids use same language so just copied using DNA template in anti-parallel direction
Term
Messenger RNA (mRNA)
Definition
resulting RNA from transcription, carrying protein building instructions from DNA to protein building ribosome
Term
Translation
Definition
synthesis of polypeptide, occuring under direction of mRNA. Base sequence changes to amino acid sequence. (in ribosome)
Term
Flow of genetic info in Bacteria vs Eukaryote
Definition
B: no nuclei, so DNA not seperate from protein synthesizers. allows translation to begin while in transcription
E: nuclear envolope separates processes in space and time
Term
Primary transcript
Definition
initial RNA transcript of any gene (pre-mRNA). further processing yields mRNA.
Term
triplet code
Definition
gene to protein; 3 nucleotide word produces one amino acid of the possible 20
Term
Template strand
Definition
the strand of DNA the is transcribed
Term
Codons
Definition
mRNA base triplets, written in 5' to 3' direction. also term for DNA base triplets along non-template strand. specifies which amino acid is incorporated @ corresponding position along polypeptide
Term
RNA polymerase
Definition
joins RNA nucleotides along DNA template, and can start a chain from scratch without primer.
Term
Promoter
Definition
Specific DNA sequence of nucleotides where RNA polymerase attaches and initiates transcription for specific gene
Term
Terminator
Definition
In bacteria, the specific DNA sequence of nucleotides that signals the end of transcription for a specific gene
Term
3 stages of transcription
Definition
Initiation, Elongation, and Termination
Term
Initiation
Definition
After RNA polymerase binds to the promoter, DNA strands unwind, polymerase initiates RNA synthesis at start point on template strand
Term
Base-Pair Insertions or Deletions (No Frameshift Mutation)
Definition
Addition or deletion of nucleotide pairs is multiple of 3. Results in Addition or deletion of 1 or more amino acids
Term
Base-Pair Insertions or Deletions (Frameshift Mutation)
Definition
May alter reading frame by changing the triplet groupings. Occurs when # of nucleotides inserted or removed not multiple of 3 causing downstream nucleotides to be incorrectly grouped into codons (extensive missense usually ending in nonsense)
Term
Base-Pair Substitution (Nonsense Mutation)
Definition
Change codon for amino acid into stop codon. Causes translation to terminate early so polypeptide shorter, almost always leads to nonfunctional proteins.
Term
Base-Pair Substitution (Missense Mutations)
Definition
Most common. Change one amino acid to another. Little effect on protein (similar amino, protein region where exact sequence not essential) Major protein change (in crucial area ex. activation site) can improve, but usually is detrimental to protein
Term
Base-Pair Substitution (Silent Mutations)
Definition
No effect on protein because new codon translates to same amino acid that the original would have
Term
Point Mutations
Definition
Chemical changes in single base pair of a gene. If in gametes or cells that produce gametes, may be transmitted to offspring and successive future generations. If has adverse affect, referred to as genetic disorder or hereditary disease.
Term
Mutations
Definition
Changes to genetic information of a cell that are responsible for huge diversity of genes found among organisms.
Term
Polyribosomes & Advantages
Definition
Multiple ribosomes translate an mRNA at the same time. Once ribosome moves past start codon, second ribosome attaches to the mRNA, eventually resulting in a number of ribosomes trailing along mRNA. Cell makes many copies of ploypeptide quickly
Term
virulent virus
Definition
a virus that reproduces only by a lytic cycle
Term
episome
Definition
a genetic element that can exist either as a plasmid or as part of the bacterial chromosome
Term
activator
Definition
A protein that binds to DNA and stimulates gene transcription
Term
control element
Definition
A segment of noncoding DNA that helps regulate transcription of a gene by binding a transcription factor.
Term
corepressor
Definition
A small molecule that binds to a bacterial repressor protein and changes its shape, allowing it to switch an operon off.
Term
epigenic inheritance
Definition
heritable changes in gene expression or cellular phenotype, caused by mechanisms other than changes in the underlying DNA sequence
Term
prion
Definition
a infectious form of protein that may increase in number by converting related proteins to more prions
Term
operon
Definition
a unit of genetic function common to bacteria and phages, consisting of coordinately regulated clusters of genes with related functions
Term
regulatory gene
Definition
a gene that codes for a protein, such as a repressor, that controls the transcription of another gene or groups of genes
Term
inducer
Definition
a specific small molecule that inactivates the repressor in an operon
Term
temperate virus
Definition
a virus that can reproduce without killing the host
Term
retrotransposons
Definition
transposable elements that move within a genome by means of an RNA intermediate
Term
nucleosome
Definition
bead-like structure in eukaryotic chromatin, composed of a short length of DNA wrapped around a core of histone proteins
Term
heterochromatin
Definition
Eukaryotic chromatin that remains highly compacted during interphase and is generally not transcribed.
Term
euchromatin
Definition
a region of DNA that is uncoiled and undergoing active transcription into RNA
Term
satellite DNA
Definition
short sequences of DNA that are repeated many times and are often clumped at the centromeres and telomeres
Term
pseudogenes
Definition
genes that have become inactivated by mutations
Term
gene ampllification
Definition
An increase in the number of copies of a particular segment of DNA
Term
alternative RNA splicing
Definition
A type of eukaryotic gene regulation at the RNA-processing level in which different mRNA molecules are produced from the same primary transcript, depending on which RNA segments are treated as exons and which as introns
Term
oncogenes
Definition
genes that cause cancer by blocking the normal controls on cell reproduction
Term
proto-oncogenes
Definition
normal cellular genes that are important regulators of normal cellular processes, they promote growth. alterations in the expression of these cells regulr in oncogenes
Term
Ras gene
Definition
gene that codes for a G protein that relays a growth signal from a growth factor receptor on the plasma membrane to a cascade of protein kinases that ultimately results in the stimulation of the cell cycle
Term
proteasomes
Definition
a giant protein complex that recognizes and destroys proteins tagged for elimination by the small protein ubiquitin
Term
recombinant DNA
Definition
2 strands of DNA engineered to mesh together to make a new strand
Term
plasmid
Definition
circular DNA that replicates separately from the bacterial chromosome
Term
restriction enzymes
Definition
snip sugar phosphate backbones to create "sticky ends"
Term
DNA ligase
Definition
glues restriction fragments together
Term
cloning vector
Definition
A gene carrier/plasmid that transfers DNA from a foreign cell or test tube to another cell
Term
bacterial artificial chromosome (BAC)
Definition
allows for easier replication/manipulation as the number of genes is reduced to a smaller size
Term
complementary DNA (cDNA)
Definition
composed by mRNA via reverse transcriptase
Term
nucleic acid hybridization
Definition
detecting a certain gene by adding a radioactive probe composed of complementary nucleotides
Term
nucleic acid probe
Definition
artificially synthesized nucleotide complement used in nucleic acid hybridization
Term
expression vector
Definition
allows a cloned eukaryotic gene to function in a bacterial host
Term
electroporation
Definition
the act of sending an electric pulse to a cell in membrane saturated solution to allow DNA to enter
Term
gel electrophoresis
Definition
separating nucleic acids/proteins based on size, electrical charge, and other physical properties
Term
southern blotting
Definition
involving both gel electrophoresis and nucleic acid hybridization to detect a specific nucleotide sequence of a specific gene on DNA
Term
northern blotting
Definition
process involving both gel electrophoresis and nucleic acid hybridization to detect a specific nucleotide sequence of a specific gene on mRNA
Term
in situ hybridization
Definition
placing probes in an organism with fluorescent dyes to determine which tissues/cells are expressing certain genes
Term
DNA microarray assay
Definition
collection of many small, single-stranded DNA fragments in a glass slide that would ideally represent all genes of an organism
Term
in vitro mutagenesis
Definition
determining the function of a gene by disabling it via mutation
Term
totipotent
Definition
describes a cell that can dedifferentiate
Term
pluripotent
Definition
capability of differentiating into different cell types
Term
transgenic
Definition
an organism that has genes from another organism of the same or different species
Term
genetic profile
Definition
an individual's set of unique genetic markers
Term
genetically modified (GM) organisms
Definition
an organism that has artificially acquired one or more genes from another of the same or different species
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