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Chapter 8
Microbial Metabolism - The Chemical Crossroads of Life
44
Microbiology
Undergraduate 2
02/28/2010

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Term
Allosteric
Definition
Pertaining to the altered activity of an enzyme due to the binding of a molecule to a region other than the enzyme's active site.
Term
Anabolism
Definition
The energy-consuming process of incorporating nutrients into protoplasm through biosynthesis.
Term
Catabolism
Definition
The chemical breakdown of complex compounds into simpler units to be used in cell metabolism.
Term
Catalyst
Definition
A susbstance that alters the rate of reaction without being consumed or permanently changed by it. In cells, enzymes are catalysts.
Term
Coenzyme
Definition
A complex inorganic molecule, several of which are derived from vitamins (eg. nicotinamide, riboflavin). Operates in conjunction with an enzyme. Serves as transient carrier of specific atoms or functional groups during metabolic reactions.
Term
Cofactor
Definition
An enzyme accessory. It can be organic, such as coenzyme, or inorganic, such as Fe, Mn, Zn or ions.
Term
Constitutive enzyme
Definition
An enzyme present in bacterial cells in constant amounts regardless of the presence of substrate. Enzymes of the central catabolic pathways are typical examples.
Term
Enzyme
Definition
A protein biocatalyst that facilitates metabolic reactions.
Term
Exoenzyme
Definition
An extracellular enzyme mainly for hydrolysis of nutrient macromolecules that are otherwise impervious to the cell membrane. It functions in saprobic decomposition of organic debris and can be a factor in invasiveness of pathogens.
Term
Fermentation
Definition
The extraction of energy through anaerobic degradation of substrates into simpler, reduced metabolites. In large industrial processes, fermentation can mean any use of microbial metabolism to manufacture organic chemicals of other products.
Term
Glycolysis
Definition
The energy-yielding breakdown (fermentation) of glucose to pyruvic or lactic acid. Often called anaerobic glycolysis because no molecular oxygen is consumed in the degradation.
Term
HaloEnzyme
Definition
An enzyme complete with its own apoenzyme and cofactors.
Term
Hydrolysis
Definition
A process in which water is used to break bonds in molecules. Usually occurs in conjunction with an enzyme.
Term
Labile
Definition
Molecules or compounds that are chemically unstable in the presence of environmental changes.
Term
Metabolites
Definition
Small organic molecules that are intermediates in the stepwise biosynthesis or breakdown of macromolecules.
Term
Negative Feedback
Definition
Enzyme regulation of matabolism by the end product of a multienzyme system that blocks the action of a "pacemaker" enzyme of or near the beginning of the pathway.
Term
Oxidized
Definition
The loss of electrons by one reactant (in chemical reactions)
Term
Redox Reactions
Definition
Denoting an oxidation-reduction reaction.
Term
Substrate
Definition
The specific molecule upon which an enzyme acts.
Term
Protein enzymes catalyze by lowering the ________ of ________ of the reaction.
Definition
energy of activation
Term
What's an apoenzyme?
Definition
The protein part of an enzyme, as opposed to the nonprotein or inorganic cofactors.
Term
What's a cofactor?
Definition
An enzyme accessory. It can be organic, such as coenzymes, or inorganic, such as Fe, Mn or Zn ions.
Term
Note the differences between competitive and noncompetitive inhibition work. First, explain competitive inhibition.
Definition
In competitive inhibition, both the normal substrate and a competitive inhibitor with a similar shape compete for the active site on the enzyme; if the normal substrate gets the active site position, a reaction proceeds; if the inhibitor does, a reaction is blocked because the inhibitor can't become a product.
Term
Glycolysis converts 1 glucose into ___ pyruvic acid molecules.
Definition
Term
Glycolysis nets _____ ATPs.
Definition
Term
Pyruvate participates in both respiration and __________ reactions.
Definition
Term
Substrate-level phosphorylation occurs in glycolysis and ________________.
Definition
Term
Carbon dioxide evolves in the intermediate reaction and _____________ cycle.
Definition
Term
_____________ are stripped off of glucose during glycolysis and the TCA cycle (oxidize/reduce) organic cofactors such as NAD.
Definition
Term
In aerobic respiration _________ is the final electron acceptor.
Definition
Term
Chemiosmotic phosphorylation occurs where in eukaryotic cells?
Definition
In the inner membrane space of the mitochondria
Term
How many ATPs occur as a result of chemiosmotic phosphorylation?
Definition
Term
Yeast fermentation produces a two-carbon molecule and a one-carbon molecule ... name them.
Definition
Term
Where does ATP in fermentation come from?
Definition
Term
What does ATP synthase do?
Definition
Term
What is ambphibolism?
Definition
Term
Where are triglycerides burned during catabolism?
Definition
Term
What is gluconeogenesis?
Definition
The formation of glucose (or glycogen) from noncarbohydrate sources such as protein or fat. Also called glyconegensis.
Term
What is the final electron acceptor in aerobic respiration? In fermentation?
Definition
Term
Contrast feedback inhibition with substrate inhibition.
Definition
Term
Formation of peptide bonds is an example of what?
Definition
Term
Hydrolysis of peptide bonds is an example of what?
Definition
Term
Drawing off organic and intermediates from the TCA cycle is termed what?
Definition
Term
Note the differences between competitive and noncompetitive inhibition work. (part two) Explain non-competitive inhibition.
Definition
The substrate fits into the available active site of the enzyme; the regulatory molecule binds into a separate site on the enzyme. If the regulatory molecule doesn't actually bind into the site, the reaction will proceed; if it does, the reaction is blocked b/c binding of regulatory molecules in reg. sites changes the conformation of the active site so the substrate cannot enter. (whichever one gets there first fits).
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