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Chapter 15
Dr. Radhika Reddy
57
Biology
Undergraduate 2
11/04/2013

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Term
What was the purpose of the hershey-chase experiment?
Definition
To study whether genes were made of protein or DNA
Term
What did hershey and chase study?
Definition
studied how a virus called T2 infects the bacterium Escherichia coli
Term
T2 infection of E. coli begins when?
Definition
The virus attaches to the cell and injects its genes into the cell
Term
What is a capsid?
Definition
the protein coat of the original parent virus
Term
Hershey and Chase grew the virus in the presence of one of two radioactive isotopes, what were they?
Definition
32P or 35S
Term
Hershey and Chase hypothesized
If genes consist of DNA: then
Definition
radioactive DNA would be found inside the cells while radioactive proteins would be found only in the ghosts outside the cells
Term
If genes consist of proteins in the hershey chase experiment what would be the result?
Definition
Then only radioactive protein found inside the cells no radioactive DNA found inside the cells
Term
What theory did the hershey chase experiment confirm?
Definition
This result supports the proposal that DNA, not protein, is the genetic material
Term
What is are the two major components of The primary structure of DNA ?
Definition
A backbone made up of the sugar and phosphate groups of deoxyribonucleotides
A series of nitrogen-containing bases that project from the backbone
Term
What is DNAs directionality?
Definition
The molecule thus has a 3prime end and a 5prime end
Term
What is antiparallel fashion?
Definition
Two DNA strands line up in the opposite direction to each other
Term
Who proposed antiparallel fashion?
Definition
Watson and crick
Term
What is a double helix
Definition
antiparallel strands twist
Term
The secondary structure of DNA is stabilized by what?
Definition
complementary base pairing
Term
Meselson and Stahl designed an experiment to?
Definition
to provide more information on the mechanism of DNA replication
Term
What did the meselson and stahl's experiment explained what?
Definition
how the hereditary material is duplicated
Term
Meselson and Stahl
Showed that each parental DNA strand is copied in its entirety but they did not do what?
Definition
Did not illustrate a mechanism for this process
Term
DNA polymerase is the enzyme that does what?
Definition
catalyzes DNA synthesis
Term
The discovery of DNA polymerase cleared the way for understanding what?
Definition
DNA replication reactions
Term
A critical characteristic of DNA polymerases is what?
Definition
They can work only in one direction
Term
DNA polymerases can add what?
Definition
deoxyribonucleotides to only the 3′ end of a growing DNA chain
Term
DNA synthesis always proceeds in the what direction?
Definition
5prime to 3prime
Term
Why is DNA polymerization is exergonic?
Definition
because the monomers that act as substrates in the reaction
Term
deoxyribonucleoside triphosphates (dNTPs)
Have high potential energy because?
Definition
their three closely packed phosphate groups
Term
A replication bubble forms in a chromosome that?
Definition
Is actively being replicated
Grows as DNA replication proceeds
Because synthesis is bidirectional
Term
What is origin of replication In bacterial chromosomes?
Definition
Where the replication process
Begins at a single location
Term
How many origins of replication do eukaryotes have?
Definition
multiple
Term
What is a replication fork ?
Definition
is the Y-shaped region where the DNA is split into two separate strands for copying
Term
Enzyme helicase catalyzes what?
Definition
Enzyme helicase catalyzes the breaking of hydrogen bonds between the two DNA strands to separate them
Term
Why do Single-strand DNA-binding proteins (SSBPs) attach to the separated strands?
Definition
to prevent them from closing
Term
Enzyme topoisomerase does what?
Definition
cuts and rejoins the DNA
Term
DNA polymerase requires what?
Definition
a primer
Term
What is Primase?
Definition
A type of RNA polymerase that Synthesizes a short RNA segment that serves as a primer
Term
The lagging strand is synthesized discontinuously because?
Definition
It occurs because DNA synthesis must proceed in the 5 prime to 3 prime
Term
Synthesis of the lagging strand starts when ?
Definition
Primase synthesizes a short stretch of RNA that acts as a primer then DNA polymerase III then adds bases to the 3prime end of the primer
Term
DNA polymerase moves away from the replication fork Helicase continues to open what?
Definition
the replication fork
Term
What is the discontinuous replication hypothesis?
Definition
Once primase synthesizes an RNA primer on the lagging strand,
DNA polymerase might synthesize short fragments of DNA along the lagging strand. These fragments would later be linked together to form a continuous whole strand
Term
The discontinuous replication hypothesis was tested by who?
Definition
okazaki
Term
What are Okazaki fragments?
Definition
The lagging strand is synthesized as short discontinuous fragments
Term
What removes the RNA primer at the beginning of each Okazaki fragment?
Definition
DNA polymerase I
Term
What joins Okazaki fragments to form a continuous DNA strand?
Definition
DNA ligase
Term
The lagging strand is also called the?
Definition
discontinuous strand
Term
What is the replisome?
Definition
The enzymes responsible for DNA synthesis around the replication fork joined into one large, multi-enzyme machine
Term
What is a Telomere?
Definition
Region at the end of a linear chromosome that
Does not contain genes
Consists of short, repeating stretches of bases
Term
DNA polymerase is highly selective in matching?
Definition
complementary bases correctly
Term
DNA polymerase inserts the incorrect base only about once every ?
Definition
every 100,000 bases added
Term
What happens to defective bases ?
Definition
Repair enzymes remove and repair them.
Term
What does it mean when it is said that DNA polymerase can proofread its work?
Definition
It checks the match between paired bases
It can correct mismatched bases when they do occur
Term
What if dna polymerase finds a mismatch?
Definition
It pauses and removes the mismatched base that was just added
Term
DNA polymerase III can do this because
Its e (epsilon) subunit acts as an?
Definition
exonuclease
It removes deoxyribonucleotides from DNA
Term
What if If DNA polymerase leaves a mismatched pair behind in the newly synthesized strand?
Definition
A battery of enzymes springs into action to correct the problem in spite of its proofreading ability
Term
Mismatch repair occurs when ?
Definition
mismatched bases are corrected after DNA synthesis is complete
Term
What do Mismatch repair enzymes do?
Definition
Recognize the mismatched pair
Remove a section of the newly synthesized strand that contains the incorrect base
Fill in the correct bases
Term
What system recognizes types of damage to DNA?
Definition
The nucleotide excision repair system
Term
The presence of a DNA strand complementary to the damaged strand provides a template for?
Definition
resynthesis of the defective sequences
Term
What is Xeroderma pigmentosum (XP)?
Definition
A rare autosomal recessive disease in humans
Characterized by the development of skin lesions
Term
What if mutations in the genes involved in the cell cycle go unrepaired ?
Definition
The cell may begin to grow in an uncontrolled manner
This growth can result in the formation of a tumor
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