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CH12 BICH DNA
n/a
17
Biochemistry
Undergraduate 3
11/06/2013

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Term
5 Steps to Recombining Molecules
Definition
1. Must be ale to cut and rejoin DNA in precise locations. Use sequence specific endonucleases
2. Select DNA molecule to serve as a carrier
3. Prepare and insert foreign DNA, vector with inserted DNA known as recombinant DNA
4. Introduce vector/insert into host organism
5. Screen for host cells replicating the hybrid DNA
Term
Type II Restriction Endonuclease
Definition
Specific DNA cleavage
Term
DNA Ligase
Definition
Covalent joining of free DNA ends
Term
DNA Polymerase
Definition
Copy DNA single strand to dsDNA
Term
Type II Restriction Endonuclease
Definition
Specific DNA cleavage
Term
Polynucleotide Kinase
Definition
Phosphorylates 5'-OH group for labeling or ligation
Term
Terminal Transferase
Definition
Homopolymerization of tails to 3'-OH ends
Term
Exonuclease
Definition
Deletes bases from 3' ends of DNA strand
Term
Phage I exonuclease
Definition
Removes 5'-3' single strand to produce ss 3' overhang
Term
Alkaline phosphatase
Definition
Removes terminal phosphates from ends
Term
Expression plasmids
Definition
Circular dsDNAs with 3 essential components:
A replicon, a selectable gene, an expression locus
Term
Amplification of Clone in Host
Definition
Cloning vector inserted into host organism, organism allowed to grow/dna duplicates thus amplifies the clone, must identify cells with cloning vector.
Term
Transformation efficiency
Definition
# of tetR colonies/ # of total viable cells plated
Term
Building DNA Library Shotgun Approach Equation
Definition
P= 1-(1-f)^N
N= (ln (1-p))/(ln(1-f))
Use to calculate the number of clones required to have prob P of isolating a particular gene.
Term
Site-Directed Mutagenesis
Definition
DNA is altered by modifying nucleotide sequence in order to change the amino acid sequence of the encoded protein. Synthetic oligonucleotides required to specifically alter the gene. They hybridize to the DNA around the area with the desired new base sequence.
Term
Transgenic Organism (animals and plants)
Definition
Express a foreign gene or transgene
Allows the engineering of an animal as an experimental model for a human disease.
Allows the expressions of proteins needed for better nutrition
Term
Gene Therapy
Definition
Introduction of a gene order to produce a therapeutic effect
Various gene therapy trials ongoing
Only documented success thus far is for severe combined immunodeficiency disease.
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