Shared Flashcard Set

Details

Biological Oceanography III
Info from the lab portion of the course
39
Biology
Graduate
12/11/2010

Additional Biology Flashcards

 


 

Cards

Term
Net growth rate (microzooplankton)
Definition
(k-g) = 1/t *ln(Nt/No), k = growth rate, g = grazing rate, t= time, N = chl values
Term
Measuring Chl a measures..
Definition
biomass/ standing stock, not Primary production
Term
Assumptions of net growth for microzooplankton
Definition
1) growth rate is density independent 2) grazing is a linear fcn of prey abundance 3)grazer populations do not grow during incubation
Term
Enzyme
Definition
Proteins that catalyze reactions
Term
Enzyme reaction
Definition
E+S* <> ES* > E + P + *
E = enzyme, s = substrate, *=labeled tag, P = phosphorus. * fluoresces when broken from S.
Term
TEP
Definition
Transparent Exopolymer Particles - negatively charged polysaccharides, precursor of marine snow, does not sink.
Term
Marine snow
Definition
clumps of DOM, visible by naked eye, good substrate for bacterial growth, sinking carbon flux
Term
Alcian Blue
Definition
Used to stain TEP to view under microscope
Term
CTD
Definition
Conductivity/Temperature/Depth sensor, also has fluorometer, transmissometer(turbidity), and dissolved O2 sensor
Term
Marine sediment core
Definition
Changes color based on oxygen levels
Term
Winkler Titration
Definition
Determines oxygen by oxidizing manganese, which is then precipitated, acidified to create triiodide, which is measured by titration.
Term
Polarographic Sensor
Definition
Detects dissolved oxygen using electrolytic cell, gold cathode, silver anode, permeable membrane
Term
% air saturation (oxygen)
Definition
partial pressure of oxygen in liquid - changes with temp based on solubility
Term
Chl A
Definition
Chlorophyll A, present in all photosynthetic organisms
Term
Chl b
Definition
found in green algae (chlorophytes, prochlorophytes)
Term
Chl c
Definition
found in high concentration diatoms
Term
4 pigments
Definition
Chl a, b, c, caroteniods
Term
spectrophotometer
Definition
measures the absorbance or transmittance of light at a specific wavelength
Term
fluorometer
Definition
measures the fluorescence, light re-emitted by pigments
Term
GFF
Definition
glass fiber filter
Term
Epifluorescence microscope
Definition
View stained organisms where under a given wavelength, the stain re-emits a characteristic wavelength
Term
YSI probe
Definition
handheld device that measures temp, dissolved O2, conductivity, and salinity
Term
SYBR Green
Definition
Stains double stranded DNA for viruses
Term
DAPI
Definition
binds to DNA to enumerate bacteria
Term
unpaired t test
Definition
measures 2 independent parametric groups
Term
paired t test
Definition
difference between 2 related groups
Term
1 way ANOVA
Definition
difference among more than 2 independent groups
Term
2 way ANOVA
Definition
difference among more than 2 related groups
Term
regression
Definition
relation of one variable to another (often linear)
Term
ANCOVA
Definition
compare regression lines (slopes and intercepts) for same x, different y groups
Term
categorical quantites
Definition
nominal - classification variables
ordinal - rank scale
Term
continuous quantities
Definition
interval - not universal meaning
ratio - most information content
Term
accuracy
Definition
how close we are to the correct value
Term
precision
Definition
how close our guesses are to each other
Term
Null hypothesis
Definition
There is no difference (in means, in slopes, in values, etc...)
Term
Alternate hypothesis
Definition
Null hypothesis is not true, there is a difference. Specify by difference in which direction, or difference by how much.
Term
Type 1 error
Definition
Reject null hypothesis when it is true, see a pattern when there is none
Term
Type 2 error
Definition
Accept null hypothesis when it is false, miss the pattern that is there.
Term
Parametric test assumptions
Definition
1. Independent Data
2. Residuals are normal
3. Residuals are not correlated with model
4. Residuals are not correlated with any explanatory variables
5. No heteroscedasticity in residuals (trumpet pattern)
Supporting users have an ad free experience!