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Biochemistry- Unit Two
TCA Cycle (T Pierce)
23
Medical
Post-Graduate
04/02/2009

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Term
How many "packets" of energy released by oxidation of acetate to 2 CO2?
Definition
4 hydride ions/4 packets of energy (remember, there are three C-H's bonds and one C-C bond)
Term
Majority of enzymes in TCA are classified as what?significance
Definition
dehydrogenases (four of them, so we can release the four "packets" of energy_
Term
Function of oxaloacetate (OAA) in TCA
Definition
carrier molecule
Term
Products of TCA cycle
Definition
  • 2 CO2
  • one CoA
  • 3 NADH's
  • one GTP
  • one FADH2
Term

Describe step one of TCA

Definition
  • OAA and acetyl CoA combine to produce    CoA-SH and citrate
  • enzyme is citrate synthase
Term
Step two of TCA
Definition
  • citrate will be isomerized to aconitate via loss of water
  • water is eventually lost, producing isocitrate
  • via aconitase
Term
Step three of TCA
Definition
  • isocitrate oxidatively decarboxylated to alpha ketoglutarate
    • reduce NAD to NADH
    • eliminate CO2 from isocitrate
  • via isocitrate dehydrogenase
Term
Step four of TCA
Definition
  • oxidative decarboxylation of alpha keto glutarate produce succinyl CoA
  • Process
    • via alpha KG decarboxylase (TPP coenzyme), produce CO2
    • remains react with CoA-SH and via transsuccinylase (coenzyme is lipoic acid), produce succinyl-CoA
    • via dihydrolipolyl DH (coenzyme FAD), produce NADH
  • enzyme complex is alpha KG DH
Term
Step five of TCA
Definition
  • tranfer of high energy bond
  • succinyl CoA combines with GDP/P to produce CoA-SH and succinate
  • enzyme is succinyl-CoA synthetase (if reverse, succinate thiokinase)
Term
Step six of TCA
Definition
  • succinate oxidized to produce FpH2 and fumarate
  • via succinate dehydrogenase/complex II
Term
Step 7 of TCA
Definition
  • hydration of fumarate
  • fumarate combines with water to form malate
  • enzyme is fumarase
Term

Step 8 of TCA

Definition
  • oxidation of malate fo form OAA and NADH (couple with reduction of NAD)
  • via enzyme malate dehydrogenase
Term
Effect of increase in ATP/ATP ratio on TCA
Definition
  • coupled to oxidative phosphorylation 
  • we need NAD to run TCA cycle
  • in ETC, NAD's are generated and the remaining H's run through complex V to generate ATP
  • if the ETC slows down, the NADH/NAD ratio will be high
  • this causes a slowing of TCA
Term
Fate of GTP generated in TCA
Definition
converted to ATP via dinucleotide kinase (produce GDP as well)
Term
What could alpha keto glutamate also be converted to?
Definition
  • glutamate, which could be converted to
    • AA's
    • purines/pyrimidines
Term
Other fate of citrate
Definition
  • converted to FA's
    • TAG
    • phospholipids
  • converted to cholesterol
    • hormones
    • bile salts
Term

Other fates of succinyl CoA

Definition
  • can be converted to heme
  • can be produced from propionyl CoA
Term

Other fates of OAA

Definition
  • convert to Asp
    • Asn
    • purine/pyrimidine
  • convert to PEP, which goes to glucose
Term
Other ways to produce fumarate
Definition

use Phe, convert to Tyr, than to fumarate and oxaloacetate

Term

Mechanism of synthesis of OAA

Definition
  • from pyruvate and CO2, produce OAA
  • via pyruvate carboxylase with biotin as coenzyme
  • CO2 binds to biotin and ATP is hydrolyzed
Term
Location of pyruvate decarboxylase and importance
Definition
  • in liver and kidney of mitochondria
  • increase acetyl CoA leads to increase activity of pyruvate decarboxylate
Term

Relation between acetate and ATP level

Definition
one mole of acetate yields 10 ATP's
Term
Sources of acetyl CoA
Definition
  • glucose via glycolysis
  • FA via beta oxidation
  • ethanol via alcohol fermentation
  • ketone bodies
  • ketogenic AA's (Lys, Leu)
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