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Biochemistry Signal Transduction
Various types of signaling along with specific examples
42
Biology
Graduate
08/22/2010

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Cards

Term
Second Messenger
Definition
Protein activated by extracellular signal that acts on other proteins inside the cell
Term
Classification of Signal Mechanisms
Definition

(1) Autocrine

(2) Paracrine

(3) Endocrine

(4) Neuronal

Term
Autocrine
Definition

Type of signaling mechanism over a short distance

One cell in a mixed population secrets and binds its own ligand

Group of identical cells bind ligand

Can be contact dependent

Term
Paracrine
Definition

Classification of signaling over a short distance

One cell in a population of phenotypically different cells secrets a ligand which is bound by these cells

Can be contact dependent

 

Term
Contact dependent Cell Signaling
Definition

Characteristic of autocrine or paracrine signaling

Important in embryogenesis and recognition of cell types in tissues

Helps restrain cell growth (cancer)

Term

Endocrine

 

Definition

Type of long distance cell signaling

Specialized endocrine cells secrete hormones into the blood stream to target

Example hormones: estrogen, progesterone, testosterone, insulin, glucagon, cortisol, epinephrine

Term
Diabetes
Definition

Defect in endocrine signaling

Types I and II

Term
Type I Diabetes
Definition

Autoimmune disorder

Disrupted endocrine signaling

No insulin is produced in the pancreas

Term
Type II Diabetes
Definition

Paracrine signaling disorder

Insulin resistance: insulin binds to receptor but there is no response

Term
Neuronal
Definition

Type of cell signaling over a long distance (axon) or short distance (synapse)

May deliver to only one cell

Two phases

(1) through neuron as electrical signal

(2) thriugh synapse to target via neurotransmitters

Term
Two ways for a ligand to induce signaling
Definition

(1) Diffusion across PM (hydrophobic-NO and steroid)

(2) Binding and activation of cell surface receptors (epi, glucagon, insulin)

Term
Steroid Hormones
Definition

Diffuse across PM and bind to intracellular receptor in cytosol

Bind DNA sequence and cause transcript and translation

Ex. testosterone, estradiol, progesterone, cortisol, aldosterone

Term
NO Signaling
Definition

Gas produced by endothelial cells to relax smooth muscle cells

Can diffuse across PM of smooth muscle to cause vasodilation

Requires nerve terminal (Ach signals endothelial to make NO), endothelial cells (synthesize NO using NOS), and muscle cells (target)

NO binds guanylyl cyclase in muscle which produces cGMP-->relaxation of cell

Term
Nitric Oxide Synethase (NOS)
Definition

Found in endothelial cells

Convert arginine to NO and citrulline

Term
Guanylyl Cyclase
Definition

Target protein for NO

Binds to Fe in active site producing cGMP which results in smooth muscle relaxation

Term
Nitroglycerin
Definition

Prodrug that produces NO without NOS

Used to treat angina-chest pain associated with lack of oxygen in heart

Relaxes blood vessels around heart to stimulate blood flow

Term
Phosphorylation Cascade
Definition

Quick response to extracellular signal

Phosphorylate serine, threonine, and tyrosine residues

Term
Kinase
Definition

Results in phosphorylation of a protein

Can turn protein on or off

Term
Phosphatase
Definition

Dephosphorylates a protein

Can turn protein on or off

Term
G-Protein Coupled Receptor (GPCR)
Definition

Mediates hormone, neurotransmitter, and local signals

7 alpha helices 

Heterotrimeric (alpha, beta, gamma)

Term
Alpha subunit of GPCR
Definition

GTPase activity

GalphaI and GalphaS-->adenylate cyclase

GalphaQ-->PLC

Molecular clock--will hydrolyze GTP after period of time to deactive itself

Term
Adenylate Cyclase
Definition

Activated by alpha subunit of GPCR

Stimulated by glucagon and epi

Converts ATP to cAMP

Term
cAMP
Definition

Formed by adenylate cyclase

Binds to PKA 

Term
Protein Kinase A (PKA)
Definition

Activated by cAMP

Tetramer: 2 regulatory, 2 catalytic

4 cAMP bind to 2 regulatory (2 each) releasing regulatory from catalytic

Catalytic begin phosphorylation cascade

Serine/ threonine kinase

 

Term
GalphaS
Definition

Activate adenylate cyclase

Beta adrenergic

Term
Beta adrenergic
Definition

GalphaS subunit

Activates adenylate cyclase

Epi stimulated

Term
GalphaI
Definition

Inhibit adenylate cyclase

Alpha2 adrenergic

Stimulated by Epi and glucagon

 

Term
Alpha2 adrenergic
Definition

GalphaI subunit

Inhibits adenylate cyclase

Term
cAMP phosphodiesterase
Definition

Converts cAMP to AMP

Stops signal

Term

Phospholipase C

PLC

Definition

Use Gqsubunit as activator

Cleaves PIP2 forming IP3 and DAG

Term
IP3
Definition

Formed from PIP2

Enter cytosol to bind to ER proteins and release Ca2+

Ca2+ binds to PKC

Term

Protein Kinase C

PKC

Definition

Activated by Ca2+ released via IP3 activity

PKC is recruited to the membrane where it binds to DAG (formed from PIP2) and is activated

Can now begin phosphorylation cascade

 

Term
Alpha 1 Adrenergic Receptor
Definition
PLC pathway with GalphaQ subunit
Term
Calmodulin
Definition

Activated by Ca2+ released by IP3

Binds 2 Ca2+

Binds CamII Kinase

Term
CaM II Kinase
Definition

Activated by calmodulin

Causes autophosphorylation which makes it unnecessary to have calmodulin bound to it for activity

Term

Receptor Tyrosine Kinase 

RTK

Definition

Activated by insulin or growth factors

When ligand bind monomers dimerize and tyrosine transautophosphorylate

Bind GRB2

Term
GRB2
Definition

Part of RTK pathway

Binds SOS

 

Term
SOS
Definition

Part of RTK pathway

GEF-guanine exchange factor

Recruits Ras and influences Ras to exchange its GDP for a GTP

 

Term

Guanine Exchange Factor

GEF

Definition

Stimulates protein to bind GTP

Gets Energized Form

Term

GTPase Activating Protein

GAP

Definition

Stimulates GTPase activity-->convert GTP to GDP

Give A Phosphate

Term
Ras
Definition

Monomeric alpha subunit with GTPase activity

Lipid embeds in membrane

Activates Raf Kinase

Term
Raf Kinase
Definition

First kinase of RTK pathway

Stimulates cell division

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