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Bio 150: Chapter 6
Energy and Metabolism
66
Biology
Undergraduate 1
04/28/2014

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Term
What is an example of potential energy rather than kinetic energy?
Definition
Food made up of energy-rich macromolecules
Term
What is correct regarding thermodynamics?
Definition
Energy can be transformed from one form to another
Term
Where is the useful energy stored in a molecule of ATP?
Definition
In the bonds connecting the two terminal phosphate groups
Term
Oxidation reduction reactions are chemical processes that result in a gain or loss in ____.
Definition
Electrons
Term
In an enzyme-catalyzed reaction, the reactant is called the _____.
Definition
Substrate
Term
A covalent bond between two atoms represents what kind of energy?
Definition
Chemical
Term
Molecules that influence enzymes through the allosteric regulation:
Definition
Bind to a non-active site on the enzyme.
Term
Metabolic reactions fall under two general categories: Anabolic and catabolic. What type of chemical reactions are these two classes of metabolic reactions?
Definition
Anabolic reactions are endergonic, where as catabolic reations are exergonic.
Term
Lifes ultimate source of energy is derived from ____.
Definition
The sun
Term
What process converts radient energy from the source above into potential energy in the covalent bonds between carbohydrate molecules?
Definition
Photosynthesis
Term
What is activation energy?
Definition
The energy required to initiate a chemical reaction
Term
The regulation of simple biochemical pathways often involves the end-product binding to the allosteric site of the first enzyme in the sequence. This mode of regulation is called______.
Definition
Feedback inhibition
Term

Sucrose phosphate synthase is one of the enzymes involved in sucrose synthesis. Indicate how changes in each of these factors would influence the rate of synthesis of sucrose

 

Temperature changed from optimal

Definition
Denatures enzyme decreasing activity
Term

Sucrose phosphate synthase is one of the enzymes involved in sucrose synthesis. Indicate how changes in each of these factors would influence the rate of synthesis of sucrose

 
pH changed from optimal 
Definition
denatures enzyme
Term

Sucrose phosphate synthase is one of the enzymes involved in sucrose synthesis. Indicate how changes in each of these factors would influence the rate of synthesis of sucrose

 
Inhibitors added
Definition
Decreases activity
Term

Sucrose phosphate synthase is one of the enzymes involved in sucrose synthesis. Indicate how changes in each of these factors would influence the rate of synthesis of sucrose

 

  Activators added
Definition
Increases activity
Term

Sucrose phosphate synthase is one of the enzymes involved in sucrose synthesis. Indicate how changes in each of these factors would influence the rate of synthesis of sucrose

 
 
Cofactors/coenzymes removed
Definition
Opposite of facilitating enzyme activity
Term
Where does the ATP come from for the reaction in plant cells?
Definition
Cellular respiration
Term
Is sucrose synthesis catabolic or anabolic?
Definition
Anabolic
Term
What happens to the other kcal of energy for ATP not used by sucrose synthesis?
Definition
Turns into thermal energy and is released.
Term
What is thermodynamics?
Definition
The brank of chemistry concerned with energy changes
Term
What is the difference between kinetic and potential energy?
Definition
Kinetic energy is energy of motion. Potential energy is stored energy
Term
What forms can energy take?
Definition
Mechanical energy, heat, sound, electric current, light, or radioactivity
Term
What is the source of energy for the biosphere? What process do plants, bacteria and some algae use to capture this energy?
Definition
The sun is the source of energy for the biosphere. Plants, bacteria, and algae capture this energy through photosynthesis
Term
Compare and contrast oxidation and reduction reactions.
Definition
oxidation is when an atom or molecule loses and electron. Oxidized. Oxidation and reduction take place together because every electron that is lost by one atom through oxidation is gained by another atom called reduction.
Term
What is a redox reaction?
Definition
Oxidation-reduction reaction
Term
First law of thermodynamics:
Definition
Energy cannot be created or destroyed; it can only change from one form to another
Term
Second law of thermodynamics:
Definition
That the disorder of the universe, more formally called entropy, is continuously increasing (disorder is more likely that order)
Term
Distinguish between entropy, enthalpy and free energy:
Definition
Free energy is the amount of energy acually available to break and subsequently form other chemical bonds. The energy available to work in a system. Enthalpy: G is equal tot he energy contained in molecules chemical bonds.
Term
Distinguish between endergonic and exergonic:
Definition
Endergonic is any reaction that requires an input of energy. (inward energy). Exergonic reactions release the excess of free energy as heat. (outward energy)
Term
What is ΔG?
Definition

Δ: Change in free energy

G: Free Energy

 

We use ΔG to determin whether or not a chemical reaction will be spontaneous.

Term

 

What is activation energy and how does it relate to the work of catalysts?

Definition
The extra energy needed to destabalyze existing chemical bonds and initiate a chemical reaction is called activation energy. Activation energy must be lowered to initiate a reaction. A catalyst does this.
Term
Whta type of molecule is ATP?
Definition
The chief "currency" all cells use for their energy transactions in the nucleotide adenosone triphosphate (ATP)
Term
Distinguish which bonds in ATP are "High Energy"
Definition
Addition of phosphate
Term
How does ATP store energy?
Definition
In its triphosphate group. Phosphate groups are highly negatively charged and they strongly reple each other.
Term
Describe the role of ATP in short-term energy:
Definition
The instability of ATP's phosphate bonds make it a bad long term energy storer
Term
What is ATP hydrolysis?
Definition
Breaking of weak phosphate bonds
Term
What is the ATP cycle?
Definition
Cell uses exergonic reactions to provide the energy needed to synthesize ATP from ADP + Pi; They use the hydrolysis of ATP to provide energy to drive the endergonic reactions they need
Term
Explain how enzymes bind  to substrates:
Definition
They have a unique 3-D shape that enables it to stabalize and temporaily associate between substrates. lowers activation energy.
Term
Distinguish between and substrate, a product and an enzyme in a catalytic cycle.
Definition
substrate are the molecules that will undergo the reaction. Enzymes carry out mosy of catalysts in living organisms and products are what you get.
Term
What is a cofactor? What is a coenzyme? What are they used for?
Definition
Enzyme function is often assisted by cofactors. When the cofactor is a non protein organic molecule it is called a coenzyme.
Term
Distinguish between catabolism, metabolism, and anabolism...
Definition

Metabolism: the total chemical reactions carried out by and organism.

Anabolic Reactions: Chemical reactions that expend energy to build up molecules

Catabolic Reactions: Reactions that harvest energy by breaking down molecules 

Term
The reaction that make up metabolism:
Definition
Catabolic and Anabolic
Term
What is a biochemical pathway?
Definition
Many of the reactions in cells occur in specific sequences called biochemical pathways
Term
Discuss what is meant by metabolic pathway:
Definition
Biochemical pathways are the organizational units of metabolism. The element the organism controls to achieve coherent metabolic activity
Term
What is feedback inhibition?
Definition
Regulation of simple biochemical pathways. The end product of the pathway binds to an allosteric site on the enzyme that catalyzes the first reaction in the pathway.
Term
6.1) What energy source might ecosystems at the bottom of the ocean use?
Definition
At the bottom of the ocean light is not an option, as it does not pentrate that deep. However, there is a large form of energy in the form of reduced minerals, such as sulfur compounds, that can be oxidized. These are abundant at hydrothermal vents found at the junctions of tectonic plates. This supports whole ecosystems dependent on the bacteria that oxidized reduced minerals available at the hydrothermal vents.
Term
6.2) Can an enzyme make an endergonic reaction exergonic?
Definition

In a work no. Enzymes only alter the rate of reactions; they do not change the thermodynamics of the reactions. 

The action of the enzyme does not change the ΔG for that reaction.

Term
6.3)If the molecular weight of ATP is 507.18g/mol, and the ΔG for hydrolysis is -7.3 kcal/mol, how much energy is released over the course of the day by a 100-kg man?
Definition

In the text, it stated that the average person turns over approximately their body weight in ATP per day. This gives enough information to determine approximately the amount of energy released:

100 kg + 1.0 x 105 g

(1.0 x 105g)/(507.18 g/mol) = 197.2 mol

(197.2 mol)(7.3 kcal/mol) = 1,439 kcal

Term
6.5) Is a catabolic pathway likely to be subject to feedback inhibition?
Definition
Term
A covalent bond between two atoms represents what kind of energy?
Definition
Potential Energy
Term
During a redox reaction the molecule that gains a electron has been...
Definition
reduced and now has a higher energy level
Term

An endergonic reaction has the following properties...

 

Definition
+ΔG and the reaction is not spontaneous
Term
A spontaneous reaction is one in which...
Definition
The reactants have a higher free energy than the products
Term
What is activation energy? 
Definition
The energy requirred to initate a chemical reaction
Term
What is not a property of a catalyst?
Definition

A catalyst lowers the energy of the reactants.

 

They do however...

Reduce the activation energy of a reaction

Does not change as a result of the reaction

works in both the forward and reverse directions of a reaction

Term
Where is energy stored in the molecule of ATP?
Definition
In the bonds connecting two terminal phosphate groups
Term
Cells use ATP to drive endergonic reactions because...
Definition
Energy released by ATP hydrolysis makes ΔG for coupled reactions more negative
Term

Which of the following is not true regaurding enzymes?

Enzymes use the 3-d shape of their active site to bind reactants.

Enzymes lower the activation energy for a reaction.

Enzymes make ΔG for a reaction more negative.

Enzymes can catalylze the forward and reverse directions of a reaction.

Definition
Enzymes make ΔG for a reaction more negative.
Term
What is the function of the active site on the enzyme?
Definition
Bind to substrate, forming and enzyme-substrate complex and side groupd within active site interact with the substrate.
Term
The discovery of ribosomes meant that...
Definition
RNA's can act as enzymes
Term
Enzymes have similar responses to both changes in temperature and pH. The effect is on the...
Definition
3-d shape of the enzyme
Term
In feedback inhibition, the...
Definition
first enzyme in a pathway is inhibited by the end-product of the pathway
Term
Synthesis question 1 and 2!!!
Definition
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