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AP Bio
Biobiobiobiobiobiobio
137
Biology
11th Grade
05/01/2011

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Term
Sympatric Speciation
Definition
factors besides spatial separation cause a species to diverge
Term
Allopatric Speciation
Definition
geographical isolation causes a species to diverge
Term
Pineal Gland
Definition
secretes melatonin and is thought to regulate circadian rhythm
Term
Lysogenic cycle
Definition
(pro)phages inject DNA into the bacteria that integrates with the host's DNA
Term
Ectoderm
Definition
outermost layer of gastrula, forms the skin and nervous system
Term
Mesoderm
Definition
forms muscle, skeleton, organs of the circulatory, excretory, and reproductive systems
Term
Endoderm
Definition
forms inner lining of digestive system organs
Term
Glucose/Fructose
Definition
monosaccharide isomers
Term
Sucrose/lactose/maltose
Definition
disaccharides
Term
Glycosidic linkage
Definition
link between saccharides
Term
Starch
Definition
primary energy storage molecule in plant cells
Term
Glycogen
Definition
major energy storage molecule in animal cells
Term
Chitin
Definition
forms structure of fungus cells, exoskeletons of insects
Term
Triglyceride
Definition
3 fatty acids attached to a glycerol molecule
Term
Amphipathic
Definition
has both polar and nonpolar regions (hydrophilic and hydrophobic) like phospholipids
Term
Steroids
Definition
lipids, go straight into cells, include cholesterol and some hormones
Term
Structure of DNA
Definition
Pyramidines (T C) and Purines (A G), nitrogen base, 5 carbon sugar (deoxyribose), phosphate group
Term
Holoenzyme
Definition
union of enzyme and cofactor
Term
Fluid mosaic model
Definition
crap moves around phospholipid bilayer
Term
Glycocalyx
Definition
carbohydrate coat that covers outside of the cell wall/membrane, consists of glycolipids and glycoproteins attached to it
Term
Ribosomes
Definition
assemble amino acids into proteins, consist of mRNA, tRNA, and rRNA?
Term
Golgi body
Definition
modify and package proteins and lipids into vesicles, which migrate and merge with the plasma membrane, releasing contents outside of cell
Term
Lysosomes
Definition
vesicles from golgi body that contain digestive enzymes, do not occur in plant cells
Term
Peroxisomes
Definition
break down stuff
Term
Microtubles
Definition
spindle apparatus, mitosis/meiosis
Term
Microfilaments
Definition
made of the protein actin and involved in cell motility, found in muscle cells and phagocytes
Term
Microtuble organizing centers (MTOC)
Definition
give rise to microtubles
Term
Hypertonic
Definition
higher concentration of solutes
Term
Hypotonic
Definition
lower concentration of solutes
Term
Dialysis
Definition
diffusion of solutes across a selectively permeable membrane
Term
Plasmolysis
Definition
movement of water out of a cell that results in the collapse of the cell
Term
Exocytosis
Definition
process of vesicles fusing with plasma membrane and releasing their contents outside the cell
Term
Endocytosis
Definition
capture of a substance outside the cell by a cesicle
Term
Pinocytosis
Definition
dissolved substances enter cell
Term
Glycolysis
Definition
Glucose -> 2 pyruvate, 2 ATP added, 4 ATP produced, 2 NADH produced, occurs in cytosol
Term
Krebs Cycle (Citric Acid cycle)
Definition
Occurs in mitochondria, produces 3 NADH, 1 FADH2, 1 ATP, CO2 from 1 pyruvate (1/2 glucose)
Term
Oxidative Phosphorylation
Definition
extracts ATP from NADH and FADH2, chain includes cytochromes, occurs in inner membrane, O2 is final electron acceptor, pH and electrical gradient formed
Term
Intermembrane space (Mitochondria)
Definition
H+ ions (protons) accumulate here, narrow area between inner and outer membranes
Term
Inner membrane (Mitochondria)
Definition
has convolutions called cristae, oxidative phosphorylation occurs here
Term
Matrix
Definition
inner fluid of mitochondria, krebs cycle and conversion of pyruvate to acetyl CoA occurs here
Term
Substrate level phosphorylation
Definition
a phosphate group and associated energy is transferred to ADP to form ATP, substrate molecule donates the phosphate group, occurs during glycolysis
Term
Anaerobic respiration
Definition
without O2 to accept the final electron, NADH accumulates and both glycolysis and the krebs cycle stops. Anarobic respiration replenishes NAD+ so glycolysis can continue, occurs in cytosol
Term
Alcohol fermentation
Definition
energy is removed from NADH and used to form ethanol, a (toxic) waste product so NAD+ can be free for glycolysis to continue
Term
Lactic Acid fermentation
Definition
Pyruvate is converted to lactate, NADH gives up its electrons, most lactate is transported to liver to be reconverted into glucose once theres extra ATP
Term
Noncyclic photophosphorylation
Definition
electrons are incorporated into NADPH, forms ATP
Term
Cyclic photophosphorylation
Definition
Electrons return to PSI after the electron transport chain, generate ATP
Term
Light-Dependent reactions
Definition
Light energizes electrons in photosystem II, electrons are passed down electron transport chain where ATP is phosphorylated, go to photosystem I where its again energized by light, go down another shorter electron transport chain, form NADPH and ATP, H2O is split to replace the lost electrons
Term
Calvin cycle
Definition
produces glucose, rubisco catalyzes merging of CO2 and RuBP, uses CO2 from atmosphere + ATP/NADH to make glucose
Term
Stroma
Definition
fluid material filling inner membrane of chloroplast, Calvin cycle occurs here
Term
Thylakoids
Definition
stack is called a granum, light dependent reactions occur here
Term
Thylakoid lumen
Definition
H+ ions accumulate here
Term
Photorespiration
Definition
Rubisco fixes O2, super inefficient/doesn't make glucose, peroxisomes have to waste ATP breaking down products
Term
C4 photosynthesis
Definition
CO2 is combined with PEP to form OAA, then converted to malate, then shuttled to bundle sheath cells, malate is converted to pyruvate and CO2. CO2 is spatially segregated to increase efficiency of photosynthesis, less photorespiration, allows the plant to reduce the amount of time stomata are open, reducing H20 loss. Sugarcane, corn, crabgrass
Term
CAM photosynthesis
Definition
CO2 is fixed to OAA, which is converted to malic acid, which is shuttled to vacuole of cell, at night when stomata are open, malic acid accumulates... during the day, hte malic acid is converted back to OAA, releasing CO2, Calvin cycle proceeds. Reduces H2O loss, CO2 is temporally segregated
Term
Prophase
Definition
Chromatin condenses, nuclear envelope breaks down, mitotic spindle is assembled
Term
Prometaphase
Definition
mitotic spindle connects to kinetochores
Term
Metaphase
Definition
Chromosomes are lined up across metaphase plate, each chromosome is pulled apart into sister chromatids
Term
Anaphase
Definition
Each pole has complete set of chromosomes
Term
Crossing Over
Definition
Prophase I, chiasmata, the farther away (map units), the more DNA exchange occurs
Term
Alternation of Generations in spores
Definition
haploid cells that divide by mitosis to become a multicellular haploid structure, the gametophyte. Gametes fuse and produce a diploid cell that becomes the sporophyte.
Term
Independent Assortment
Definition
Tetrads of homologous chromosomes separate into chromosomes that go to opposite poles, which chromosome goes to which pole is random depending on orientation
Term
Regulation of Cell cycle
Definition
Surface to Volume ratio: cell growth stops once the volume to surface ratio is too large, because it has to be able to exchange crap. Genome to volume ratio: also stops if the volume is too big for the DNA to handle. Checkpoints:
Term
Law of Segregation
Definition
separation of alleles to individual gametes; each gamete contains only one copy of each chromosome
Term
Dihybrid cross
Definition
2 traits are , 9:3:3:1
Term
Test cross
Definition
P_ x pp, because you know the genotype of a recessive phenotype
Term
Incomplete dominance
Definition
blending of individual expressions of 2 alleles (red + white = pink)
Term
Codominance
Definition
complete expression of both alleles, cows
Term
Multiple alleles
Definition
blood type
Term
Epistasis
Definition
one gene affects the phenotypic expression of a second gene; coat color in mice: even if a mice has the gene for brown color, if it doesn't have the gene for color expression, it'll be white
Term
Pleiotropy
Definition
a single gene has more than one phenotypic expression: allele for wrinkled texture of seeds also results in them containing more water
Term
Polygenic inheritance
Definition
continuous variation of phenotype: tall-short
Term
Linked genes
Definition
reside on same chromosome and cannot segregate independently
Term
Sex-linked inheritance
Definition
gene resides on X chromosome, males are screwed
Term
Polyploidy
Definition
all chromosomes undergo meiotic nondisjunction and produce gametes with twice the number of chromosomes, common in plants.. produces its own viable diploid gametes, reproductive isolation occurs in a single generation
Term
Aneuploidy
Definition
a genome with extra or missing chromosomes
Term
Translocation
Definition
Movement of tRNA; movement of carbs through phloem; when a segment of a chromosome is moved to another chromosome
Term
Semiconservative replication
Definition
each DNA molecule has 1 strand that's old (template) and 1 that's new (complementary)
Term
DNA polymerase
Definition
moves in 3'->5' direction, assembles new DNA strand
Term
DNA ligase
Definition
connects okazaki fragments
Term
Primase
Definition
forms RNA primers
Term
Telomeres
Definition
ends of DNA strands, telomerase attaches them (short sequence of repeating nucleotides)
Term
Promoter region
Definition
Initiation (Transcription): RNA polymerase attaches to it and begins to unzip DNA
Term
Poly-A tail
Definition
attaches to 3' end of the mRNA
Term
GTP
Definition
provides energy for translation
Term
Missense mutation
Definition
new codon codes for a new amino acid
Term
Silent mutation
Definition
new codon still codes for same amino acid
Term
Nonsense mutation
Definition
new codon codes for a stop codon
Term
Mutagens
Definition
radiation or chemicals that cause mutations
Term
Proofreading
Definition
DNA polymerase checks over new strand
Term
Mismatch repair
Definition
enzymes repair errors that escape proofreading
Term
Excision repair
Definition
removes nucleotides damaged by mutagens in original DNA
Term
Nucleosomes
Definition
DNA-histone complex: DNA is coiled around bundles of histone proteins
Term
Phages
Definition
viruses that attack only bacteria, have RNA or DNA, have a capsid (protein coat) that encloses nucleic acid, has an envelop
Term
Lytic cycle
Definition
virus penetrates cell membrane of host and uses host to produce viral stuff, assembled into new viruses
Term
Retroviruses
Definition
use reverse transcriptase to make DNA out of their RNA
Term
Binary Fission
Definition
how prokaryots reproduce
Term
Plasmid
Definition
short, circular DNA molecule outside of chromosome
Term
Conjugation
Definition
DNA exchange between bacteria (awww)
Term
Transduction
Definition
new DNA is introduced into genome of a bacterium by a virus
Term
Transformation
Definition
Bacteria absorb DNA from their surroundings and incorporate it into genome
Term
Regulatory proteins (eukaryots)
Definition
repressors and activators, influence how readily RNA polymerase will attach to a promoter region
Term
RNA interference
Definition
siRNAs block mRNA transcription or translation or degrade existing mRNA
Term
Gel eletrophoresis
Definition
electric field, DNA is negatively charged, shorter fragments migrate further
Term
Restriction fragment length polymorphisms (RFLPs)
Definition
used in DNA fingerprinting, slight differences in DNA sequences
Term
Polymerase chain reaction (PCR)
Definition
DNA fragments are amplified
Term
Tendons
Definition
Muscle to bone
Term
Sarcomere
Definition
basic functional group of muscle (one repetition)
Term
Actin
Definition
Smaller myofibril, slides into myosin
Term
Acetylcholine
Definition
principle neurotransmitter
Term
Homologous structures
Definition
body parts that resemble one another in different species because of common ancestor (fin, arm, wing)
Term
Analogous structures
Definition
similar body parts that evolved independently
Term
Stabilizing selection
Definition
eliminates individuals with extreme traits
Term
Disruptive (diversifying) selection
Definition
occurs when the environment favors extreme traits
Term
Diploidy
Definition
presence of 2 copies of each chromosome in a cell. in heterozygotes, recessive allele is hidden from natural selection and is "stored" for future generations, results in more variation
Term
Balanced polymorphism
Definition
maintenance of different phenotypes in a population
Term
Frequency-dependent selection (minority advantage)
Definition
when the least common phenotypes have a selective advantage
Term
Gene flow
Definition
emigration or immigration of the population (introduction/removal of alleles)
Term
Genetic drift
Definition
random increase/decrease of alleles, strong when populations are small
Term
Founder effect
Definition
allele frequencies ina group of migrating individuals are, by chance, not the same as that of their population of origin
Term
Bottleneck
Definition
when a population undergoes a dramatic decrease in size
Term
Inbreeding
Definition
decreases variation, nonrandom mating
Term
Hardy-Weinberg equilibrium
Definition
no evolution (no natural selection, no mutations, isolated population, large population, random mating) Frequency of homozygotes: (p^2, q^2). Frequency of heterozygotes: (2pq). Equation: p^2 + 2pq + q^2 = 1. (p + q = 1)
Term
Convergent evolution
Definition
2 unrelated species share similar traits
Term
Parallel evolution
Definition
2 related species that have made similar evolutionary changes after divergence from a common ancestor
Term
Phyletic gradualism
Definition
argues that evolution occurs by the gradual accumulation of small changes
Term
Parenchyma
Definition
Ground tissue of plant, serves various functions (storage, photosynthesis, secretion), thin walls
Term
Collenchyma
Definition
thick but flexible cell walls, mechanical support of plants
Term
Sclerenchyma
Definition
thick walls, mechanical support
Term
Dermal tissue
Definition
epidermis cells that cover outside of plants, guard cells, secrete waxy protective cuticle
Term
Vascular bundles
Definition
xylem and phloem
Term
Xylem
Definition
conduction of water and minerals, 2 cell walls, pits, most are dead at maturity. 2 kinds of xylem cells: tracheids and vessel elements. Perforations are holes between vessels, efficient water movement
Term
Cotyledons
Definition
digested endosperm
Term
Epicotyl
Definition
shoot tip
Term
Plumule
Definition
young leaves
Term
Radicle
Definition
develops into root
Term
Primary growth
Definition
apical meristems, upward/downward
Term
Secondary growth
Definition
lateral meristems, vascular cambium, and cork cambium, width growth
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