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TEST II BIOCHEM
Fill in the Blank Qestions
27
Biochemistry
Undergraduate 4
06/05/2011

Additional Biochemistry Flashcards

 


 

Cards

Term
Polysomes
Definition
An assemblage of several ribosomes bound to one mRNA molecule.
Term
Palindrome
Definition
A nucleic acid sequence that reads forward or backward
Term
Plasmid
Definition
A small, circular piece of DNA that is not part of a bacterial chromesome
Term
The energy output required for protein synthesis is at least ____ high-energy bonds per amino acid.
Definition
Four
Term
Breifly describe the role of promoters in the prokaryotic transcription process.
Definition
The region of DNA that helps RNA polymerase bind to DNA. It is located upstream of the transcription start site and usually runs from -35 bases up stream to the transcription start site.
Term
Breifly describe the role of rho (ρ) in the prokaryotic transcription process.
Definition

Protein that binds mRNA and when it meets RNA polymerase that is transcribing RNA, it stops and dissociates it stopping the transcription process.

 

Helps separate DNA-RNA hybrid.

Term

Describe the basic steps in PCR

Definition
  1. Denaturation:   DNA is denatured by high heat temps
  2. Hybridization:   DNA is cooled so that RNA primers can bind to the DNA in the opposite directions
  3. Polymerization: Taq polymerase is added to synthesize the desired DNA from the added primers
Term
Explain the value of PCR to biochemistry/medicine
Definition
Can be used to make several copies of a desired DNA sequence to use for study/research.
Term
Describe the role/function of the Shine-Delgarno Sequence in translation
Definition
Sequence of nucleotides on mRNA that are complimentary  and recognized by the 30S ribosome subunit and helps to align mRNA properly for translation
Term
Describe the role/function of the GTP in translation
Definition
High energy molecule.  For each step in elongation one anhydride bond is broken for energy.  For each aminoacyl-tRNA accepted into the A site one anhydride bond is broken for energy.
Term
Telomerase
Definition
An enzyme that protects the 3'-ends of chromesomes
Term
Short primers are not required to initiate transcription in prokaryotes
Definition
True
Term
DNA sequencing by Sanger's method involves incorporating __________ that stop chain elongation
Definition
Dideoxynuclotides
Term
Ubiquitin
Definition
A protein that marks proteins for degredation
Term
Describe the role of the sigma subunit in transcription
Definition
recognizes the promoter locus, released once transcription stops
Term
Describe the role of the RNA polymerase in transcription
Definition
Catalyzes formation of phosphodiester bonds between the incoming ribonucleotides
Term
Enzymes that cleave DNA at specific sequences are called
Definition
Restrictive Endonucleases
Term
Prokaryotic Genome
Definition

Circular

One Chromesome

No introns

 

Term
Eukaryotic Genome
Definition

Linear

23 Chromesomes

Contains Introns which are removed during splicing

bind with proteins (histones)

Term
Describe the role of DNA Polymerase I in DNA replication
Definition

Fills gaps between Okazaki fragments on lagging strand

functions 5'-3' or 3'-5'

Term
Describe the role of Primase in DNA replication
Definition
Catalyzes RNA Synthesis which in turn allows binding of DNA Polymerase III
Term
Describe the role of Okazaki fragments in DNA replication
Definition
New DNA fragments on lagging strand moving in the opposite direction of the replication fork
Term
Describe the role of Helicase in DNA replication
Definition
Enzyme that unwinds DNA by breaking H-bonds making replication possible
Term
Why is DNA more stable than RNA?
Definition
The additional 2' -OH on ribose is an activating group that destabilizes the structue.
Term
Structural/Functional components of DNA
Definition

Double-Helix, Double Stranded

Anti-Parallel

SS held together by covalent bonds

Sugar used is deoxyribose

used to transcribe RNA

Contains Thymine nucleotide

Term
Structural/Functional components of RNA
Definition

Single Stranded

Used to make proteins

Sugar is Ribose

Several different types

Sugar is Ribose

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