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Test 2
N/A
102
Biology
Graduate
03/18/2013

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Term
Organic Molecules
Definition
Has to have a minumum of carbon and hydrogen. They vary greately in size and structure and consist of a carbon skeleton and hydrocarbon.
Term
Carbon Skeleton
Definition
The core of an organic compound: usually a series of Carbon atoms bonded to each other and bonded to Hydrogens on the side.
Term
Hydrocarbon
Definition
An organic compound made only of C and H. They are nonpolar and hydrophobic.
Term
Functional Groups
Definition
A small group of atoms attached to a larger organic molecule, which gives that molecule most of its properties. They tend to be polar or ionic and therefore react with other molecules.
Term
Macromolecule
Definition
A large organic molecule
Term
Polymer
Definition
A macromolecule made of repeated subunits (monomers)
Term
Monomer
Definition
The repeated subunit (or building block) of a polymer (usually a medium-sized molecule).
Term
Dehydration Synthesis
Definition
Making a bond in a polymer by ejecting one H2O (building polymers from monomers)
Term
Hydrolysis
Definition
Breaking a bond in a polymer by inserting one H2O (breaking down a polymer into a monomer)
Term
Isomers
Definition
Molecules with the same molecular formula but different structures and therefore different properties.
Term
Carbohydrates
Definition
An organic molecule made of C, H, and O in a 1:2:1 ratio. The formula is n(CH2O)
Term
Monosaccahrides
Definition
A type of carbohydrate. They are simple sugars, the monomers of all other carbohydrates, and they contain 3-6 carbons. Their functions contain pentose and hexose sugars.
Term
Pentose Sugars
Definition
Monosacchrides that are parts of the monomers of RNA and DNA. (ribose, deoxyribose)
Term
Hexose Sugars
Definition
Monosaccharides that are the monomers of disaccharides and polysaccharides. They also supply quick energy. (Glucose, fructose, galactose)
Term
Disaccharides
Definition
Two monosaccharides that are joined by dehydration synthesis. Their function is quick bursts of energy. (sucrose, maltose, lactose)
Term
Polysaccharides
Definition
A carbohydrate made of 5 or more monosaccharides.
Term
Storage Polysaccharides
Definition
A type of polysaccharides that has a function of storing energy. (starch and glycogen)
Term
Starch
Definition
Storage Polysaccharides made by plants. It comes in two forms: unbranched amylose and branched amylopectin.
Term
Glycogen
Definition
Storage polysaccharides made by animals. It's stored in liver and muscel cells. the structure is highly branched polymer of glucose.
Term
Structural Polysaccharides
Definition
A type of polysaccharides that gives support and protection either to cells or a whole body. (cellulose and chitin)
Term
Cellulose
Definition
A structural polysaccharide made by plants. It's found in the cell wall and has no nutritenal value to humans. It's structure is long unbranched polymers of glucose units.
Term
Chitin
Definition
Structural Polysaccharides that are found in cell walls of fungi and the exoskeletons of arthropods. The structure is it has CHO in an 1:2:1 ration and it also has N (nitrogen). It has no nutritional value to humans (indigestable)
Term
Lipids
Definition
Made of C, H, O but the ration of H to O is greater than 2:1 meaning lots of hydrogen and very little oxygen. They are hydrophobic and soluble in nonpolar solvents because they have so few oxygen atoms.
Term
Neutral Fats
Definition
Lipids that have 1 glycerol + 1, 2, or 3 fatty acids.
Term
Triglycerides
Definition
3 fatty acids and 1 glycerol.
Term
Amino Acids
Definition
The monomers of proteins. The structure consists of radical group, carboxyl group, and amino group. The radical group makes one of these different from another. There is 20 types of these.
Term
Peptide Bond
Definition
The bond formed between amino acids by dehydration synthesis. The bonds are strong, covalent bonds.
Term
Primary Structure
Definition
One of the four protein structures. A list of which amino acids make up a polypeptide and in what order.
Term
Secondary Structure
Definition
One of the four protein structures. Either an accordian-like "pleated sheet" or a coiled "alphahelix", held together by weak H-bonds between neighboring aa's.
Term
Tertiary Structure
Definition
One of the four protein structures. Twisting and turning of a polypeptide around and through itself. It's caused by strong and weak bonds between distant aa's.
Term
Quaternary Structure
Definition
One of the four protein structures. Just like tertiary but this deals with a branched protein (each color is a different branch on the structure figure).
Term
Denaturing Proteins
Definition
Changing its shape (by destroying H-bonds and ionic bonds), but keeping the same chemical composition. 3 causes are extreme heat, changing the proteins pH environment, and changing the salinity (saltiness) of the proteins environment.
Term
Nucleic Acids
Definition
RNA and DNA
Term
Nucleotides
Definition
Monomers of nucleic acids. The structure consists of phosphate, pentose sugar, and nitrogenous base.
Term
Purines
Definition
Thick Adenine and Guanine
Term
Pyrimidines
Definition
Thin Cytosine and Thymine
Term
Genetic Code
Definition
That part of the DNA which codes for one polypeptide (unbranched protein). On one side of DNA, 3 successive N-bases (on 3 nucleotides) code for one aa. 1 aa = 3 nucleotides.
Term
Endomembrane System
Definition
All the organelles with membranes which are connected structurally, if not functionally, by their membrane. (Does not include mitochondria and chloroplasts)
Term
Nucleus
Definition
It's main function if to house chromosomes. This (and the chromosomes it contains) is said to be the brain of the cell.
Term
Chromosomes
Definition
A structure made of 2 kinds of molecules: DNA wrapped around proteins. It's housed in the nucleus.
Term
Nuclear Envelopse
Definition
Consists of two membranes on top of each other. Each membrain contains a phospholipid bilayer. Therefore it is actually made of 4 layers of phspholipids. It is also pockmarked with "nuclear pores", which let through ribosomes and mRNA.
Term
Nucleolus
Definition
A thickly coiled area within a chromosome, which is actively producing ribosomes. It appears as a dark, circular area within the nucleus.
Term
Endoplasmic Reticulum
Definition
A network of channels extending from nuclear pores to throughout the cytoplasm; functions as a highway to transport materials through the cell.
Term
Rough ER
Definition
Specializes in making and transporting proteins. It's dotted with tiny ribosomes. It makes proteins destined to be secreted from the cell.
Term
Smooth ER
Definition
Produces and transports lipids and complex carbohydrates. In muscle cells, it contains "cysternae" filled with Ca+ ions needed for muscle contraction. In liver cells, it gets rid of excess cholesterol, and detoxified poisons by making them soluble in water so they can be excreted in urine.
Term
Golgi Complex
Definition
Stack of flattened, c-shaped pancakes (cysternae) which receives transport vesicles, packages groups of similar, refined molecules into secretory vesicles, and send out secretory vesicles for secretion from the plasma membrane via exocytosis. It's called the post office of the cell.
Term
Refining
Definition
Combining simple chemicals into more complex ones.
Term
Lysosomes
Definition
Sacs filled with digestive enzymes. Functions: in some WBCs, they join with food vacuoles formed by phagocytosis to digest bacteria or cancer cells, autophagy, and autolysis.
Term
Autophagy
Definition
Digestion and recycling of old cell parts.
Term
Autolysis
Definition
Digestion of whole cell when it ages and all of its membranes (including those of lysosomes) begin to fall apart.
Term
Apoptosis
Definition
Programmed cell death.
Term
Mitochondria
Definition
The site of aerobic cellular respirating. It's called the "power house" of the cell.
Term
Cellular Respiration
Definition
The process of breaking down glucose to release its energy to ATP.
Term
ATP
Definition
The molecule that can give glucose's energy to the cell to do work.
Term
Chloroplasts
Definition
The site of photosynthesis.
Term
Photosynthesis
Definition
Sited in chloroplasts. Plants make glucose and then store it as starch.
Term
Vacuoles
Definition
A membrane-bound sac which is potentially empty unless filled with something. There are 3 kinds of these: Central, food, and contractile.
Term
Central Vacuoles
Definition
Found in plants and occupy up to 90% of the cell. They store water and nutrients, dispose of metabolic wastes by recycling them into other compounds or storing as crystals, and act like lysosomes: break down old organelles. Tonoplast is the membrane.
Term
Food Vacuoles
Definition
Found in protozoans and in certain human white blood cells. After smaller cells are ingested by phagocytosis (engulfing), the engulfed cell and its immediate surroundings form this inside the larger cell's cytoplasm. This later joins with a lysosome for digestion of the "food".
Term
Contractile Vacuoles
Definition
Found in protozoa. It acts as beating pumps which remove excess water from the organism's fresh water surroundings that has entered the cell by osmosis.
Term
Peroxisomes aka Microbodies
Definition
The smallest membrane-bound organelle. They are the sites where anti-oxidants (like vitamins C&E) neutralize oxidants (free radicals) like H2O, which would otherwise steal electrons and cause cancer & mutations.
Term
Cytoskeleton
Definition
A network of fine cables throughout the cytoplasm; each cable is made of proteins. Contains 3 types of fibers: intermediate fibers, actin filaments (microfilaments), and microtubules.
Term
Intermediate Fibers
Definition
Maintains the shape of the cell by spanning cytoplasm and attaching to plasma membrane, like spokes of a wheel.
Term
Actin Filaments (Microfilaments)
Definition
The thinnest type of fibers in cytoskeleton. They contract in order to move muscles, change cell shape by forming pseudopods in WBCs and amoebas, and cause cytoplasmic streaming in plant cells.
Term
Microtubules
Definition
The thickest type of fiber in cytoskeleton. They can also contract in order to pull chromosomes apart during cell division (called spindle fibers) and move cilia and flagella.
Term
Pseudopods
Definition
False feet extended from cell and grab and engulf "prey" by phagocytosis. It's found in amoebas and is moved by microfilaments.
Term
Flagella/Flagellum
Definition
A single (sometimes more), long "tail" coming out of a sperm cell in all animals and plants. Used like a whip for locomotion in eukaryotic cells (utilize an internal 9 + 2 arrangement of microtubules to bend. It works like a propellor in prokaryotic cells (only structure in the living world to utilize a complete rotary motion making flagellated bacteria motion speed faster for their size than any other organism)
Term
Cilia/Cilium
Definition
Tiny hair-like projections of the cell membrane.
Term
Centrioles
Definition
Cylinders of cytoskeleton fibers. They act as anchors for spindle fibers, which pull apart chromosomes during cell division.
Term
Centrosomes
Definition
A pair of centrioles at right angles of each other, found outside the nucleus. It only occurs while the cell is not dividing. During sell division, these split into two centrioles.
Term
Cholesterol
Definition
A slippery molecule floating with the phospholipits. It therefore breaks up "logjams" of the phospholipids.
Term
Channel Proteins
Definition
These introduces holes in the membrane whose shapes allow specific substances thru, which the phospholipid would otherwise reject.
Term
Transport Proteins
Definition
A specific substant lands on the receptive surface of the protein which closes then opens on the other end, letting the substance thru. The shapes of the two molecules must match.
Term
Hormone Receptors
Definition
The receptor protein is shaped to "catch" a specific hormone. It then releases a molecule which diffuses into the nucleus, turns on a gene, and the cell responds.
Term
Cell Membrane
Definition

Functions:

1. Communication with other cells and self-identification.

2. Give the cell shape and protection.

3. Selectively permeable.

Term
Cell Surface Markers
Definition
Aka Antigens. Their mostly made of proteins. They identify cell as to tissue type and as belonging to a particular individual. They keep the body from having and immune response against itself.
Term
Receptors in Cell Membranes
Definition
Also made of proteins. They recieve hormones from other cells which tell this cell what to do.
Term
Passive Movement
Definition
This movement relies on kinetic energy already in the system. No additional source of energy is needed to move materials across the cell membrane.
Term
Kinetic Energy
Definition
Energy that causes matter to move (in this case it is body heat).
Term
Active Movement
Definition
This movement requires additional energy (besides the kinetic energy in the system) to move the particles across the cell membrane. The energy comes directly from ATP.
Term
Simple Diffusion
Definition
Spreading of particles from areas of high concentration to areas of low concentration. As they diffuse, the particles move "down their concentration gradient." Particles continue to diffuse across a membrane until both sides of the membrane are in equilibrium.
Term
Facilitates diffusion
Definition
Passive transport of substancs across the cell membrane, but to which the phospholipids in the cell membrane are impermeable. Transport proteins grab the substance on one sie of the cell membrane and release it on the other side.
Term
Osmosis
Definition
Diffusion of water across a selectively permeable membrane, in response to a difference in solute concentrations on either side of the membrane.
Term
Osmotic Pressure
Definition
Ability of a solution to draw water across a selectively permeable membrane from another solution. It is measured as the pressure of the water flowing across the membrane.
Term
Isotonic Solutions
Definition
2 or more solutions with the same solute concentrations.
Term
Hypertonic solutions
Definition
Solution A is this to Solution B if Solution A has a higher solute concentration than B.
Term
Hemolysis
Definition
Bursting of a hypertonic red blood cell.
Term
Lysis
Definition
Bursting of any hypertonic animal cell.
Term
Hypotonic Solutions
Definition
Solution A is this to solution B if solution A has a lower solute concentration than B.
Term
Crenation
Definition
The shrinking of a hypotonic red blood cell.
Term
Active Transport
Definition
Transport proteins carry impermeable substances across the cell membrane, but the substances cross the membrane against their concentration gradients; i.e. from low to high concentration. Requires energy from ATP (40% of the cell's ATP goes to this.
Term
Coupled Transport
Definition
A molecule diffuses into a cell against its concentration gradient by bonding with another molecule that isn't going against its concentration gradient.
Term
Bulk Transport
Definition
Movement of large molecules or particles in either direction across the membrane. Because the cell membrane is changing shape, this requires extra energy from ATP.
Term
Endocytosis
Definition
Engulfment of large molecules or particles by a cell membrane changing shape to surround them.
Term
Phagocytosis
Definition
Engulfment of large particles (can be small cells), pseudopods (false feet) are formed to engulf the object, amoebas feed this way; some white blood cells do it to bacteria and cancer cells.
Term
Pinocytosis
Definition
Engulfment of droplets of extracellular fluid, containing various large molecules. Called "cell drinking". Happens in cells of placenta: embryo drinks in mother's fluids.
Term
Receptor-Mediated Endocytosis
Definition
Exactly like pinocytosis except here receptors in "coated pits" bind with specific molecules dissolved in the solution outside the cell. Drops of the solution are then engulfed.
Term
Exocytosis
Definition
Opposite of endocytosis - substances are brought out of the cell. Happens when things like hormones, enzymes or mucus are secreted from a cell.
Term
Desmosomes
Definition
One of the four types of cell junctions. Its result is it is the strongest cell junction which is found in areas of great wear and tear (between muscle cells)
Term
Tight Junctions
Definition
One of the four types of cell junctions. The result is it slows diffusion between cells and is found where cells of different tissue types meet.
Term
Gap Junctions
Definition
One of the four types of cell junctions. These are channel proteins forming holes (gaps) between two adjoining cell membranes. The result is it speeds diffusion between cells.
Term
Plasmodesmata
Definition
One of the four types of cell junctions. It is gap junctions between plant cells, spanning 2 plasma membranes and 2 cell walls. It's purpose is to allow H2O and sap to flow between plant cells.
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