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Terminal Oxidation
Cs-Szabo
30
Biochemistry
Professional
10/09/2011

Additional Biochemistry Flashcards

 


 

Cards

Term

 

 

 

 

electron transport

Definition

 

 

 

electron carriers transfer e- from reduced coenzymes (NAD and FADH), E from ΔG of these reactions is used to generate ATP

 

protons are pumped across membrane--gradient used to make ATP

Term

 

 

 

oxidative phosphorylation

Definition

 

 

 

reducing power from ETC converted to ATP energy

Term

 

 

 

 

terminal oxidation (2 components)

Definition

 

 

electron transport and oxidative phosphorylation

Term

 

 

 

 

location of terminal oxidation

Definition

 

 

 

 

mitochondrial inner membrane

Term

 

 

 

Where do the reduced coenzymes used in term ox come from?

Definition

 

 

 

NADH: glycolysis (transported to mito matrix by shuttles), PDH, TCA, fatty acid beta-ox

 

FADH: TCA & fatty acid beta-ox

Term

 

 

 

oxidation-reduction

Definition

 

 

electrons transferred from e- donor (reductant) to e- acceptor (oxidant)

Term

 

 

 

oxidation-reduction potential

Definition

 E0 --capacity for a donor to give up its e- to an acceptor

measured in volts

 

value compared to standard reference half-cell, usually hydrogen electrode rxn

 

large neg E0= strong reducing agent (lose e-), pos=oxidizing agent (accepts e-)

 

Term

 

 

 

 

 

redox pair

Definition

 

 

 

e- donor and e- acceptor

Term

 

 

 

 

potential of standard hydrogen electrode at physiological pH

 

Definition

 

 

 

 

@ pH 7 = -.42 V

 

Term

 

 

 

 

vitamin and mineral cofactors in ETC (5)

Definition

 

 

NAD

FAD

FMN

iron

copper

Term

 

 

 

ETC components

Definition

 

 

4 multi-subunit enzyme complexes with redox systems

 

Complex I-IV

Coenzyme Q

cytochrome C

Term

 

 

Path of NADH thru ETC

Definition

 

 

Complex I --> II --> CoQ -->III --> cyto C -->IV

Term

 

 

 

vitamin C and ETC

Definition

 

 

 

 

necessary for fuctioning of cytochrome C

Term

 

 

 

path of FADH2 thru ETC

Definition

 

 

 

enters at II or CoQ --> III --> cyto C --> IV

 

 

since it enters later, only 2 ATP are created/ FADH molecule compared to 3/ NADH molecule

Term

 

 

 

 

 

ETC products

Definition

 

 

oxygen (final electron acceptor) + H --> WATER

Term

 

 

 

 

rotenone

Definition

 

 

fish poison

 

inhibits ETC complex I

Term

 

 

 

 

amytal

Definition

 

 

 

 

barbiturate

 

inhibits ETC complex I

Term

 

 

 

 

 

antimycin A

Definition

 

 

antibiotic

 

inhibits ETC complex III

Term

 

 

 

 

cyanide, azide & CO in ETC

Definition

inhibit terminal step at complex IV

 

cyanide: binds to Fe3+ in heme a3 of cytochrome c oxidase enzyme in complex IV, preventing O2 from binding to enz

antidote: nitrites convert oxyHb to metHb by oxidizing Fe2+ to Fe3+.  Fe3+ competes with cytochrome a3 for cyanide.  THIOSULFATE causes cyanide to react with rhodanese-->thiocyanate

Term

 

 

 

fate of protons pumped out of matrix

Definition

 

 

acidic intramemb space/ basic mitochondrial matrix= gradient

 

protons travel back to matrix through F1F0-ATPase (aka Complex V)

Term

 

 

 

 

F0 subunit

Definition

 

 

 

proton channel subunit: when incorporated into the membrane, memb is permeable to protons

 

sensitive to oligomycin (poison)

Term

 

 

 

 

 

oligomycin

Definition

 

 

 

toxin created by bacteria that inhibits F0 subunit (proton channel) of ATPase

Term

 

 

 

F1 subunit of ATPase

Definition

 

 

 

contains ATPase enzyme which synthesizes ATP on the F1 surface

Term

 

 

 

how ATPase works

Definition

 

 

NOT actually an enzyme, uses mechanical energy

 

proton Δs conformation of F0, turns F1 and produces ATP

Term

 

 

 

 

ATP synth reaction

Definition

 

 

 

 

ADP + Pi--> ATP

Term

 

 

 

 

uncoupling of phosphorylation and respiration

Definition

 

 

dissipate proton gradient, respiration and ETC no longer coupled to ATP synthesis

 

Physiological uncoupling protein (UCP-1)

Term

 

 

 

 

 

UCP-1

Definition

found in brown adipose tissue of newborns and hibernating animals

 

cold sensation-->triglyceride hydrolysis, which stimulates UCP-1

 

loc in inner mito memb, has specific pore through which e- transported back into matrix-->E gained not used for ATP synth, but for heat production "non-shivering thermogenesis"

Term

 

 

 

 

Leber's Hereditary Optic Neuropathy

Definition

mitochondrial disease resulting from single base change in mito genes for complex I subunits-->lower activity of complex I

 

affects CNS, esp optic nerve-->sudden-onset blindness

 

lower % mut. mtDNA-->sudden-onset blindness in young adulthood, higher %-->dystonia, impaired speech, mental retardation

Term

 

 

 

mitochondrial myopathies

Definition

 

mutations in tRNA

 

impaired mito protein synth-->dec activity of Complex I and Complex IV

 

affects CNS

Term

 

 

 

 

 

cytochrome b mutations

Definition

lowered activity of complex III

 

exercise intolerance, hypertrophic cardiomyopathy, lactic acidosis in resting state, myoglobinuria

 

only muscle cells affected, suggests somatic mutation during germ-layer differentiation

 

Tx: vit C and K-->reduce cyto C/ox NADH, bypassing complex III and CoQ

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