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Microbiology Exam 5
Chapters 17, 18, 25
109
Microbiology
Undergraduate 1
12/05/2025

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Term
Primary Response
Definition
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Initial antibody response is IgM, quickly turns into IgG. Specific to antigen, low affinity.
Term
Secondary Response
Definition
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Memory B cells expand and differentiate into more memory and plasma cells.
Term
Variolation def. (before vaccines)
Definition
(1000-1400 CE) Taking a sample of smallpox from an infected person and introducing it into an uninfected person (variola virus)
Term
What did Edward Janner do?
Definition
(1789 CE) Created vaccinations for smallpox using cowpox
Term
Vaccine def.
Definition
Suspension of an organism or parts of an organism to induce immunity
Term
Active vs. Passive vaccines
Definition
Active: Antigen exposure, stimulates immune system, antigen specific antibodies and T cells made (ex. vaccines)
Passive: Protectivre antibodies (ex. immunoglobin, antitoxins, breastfeeding
Term
Active vs. Passive vaccines
Definition
Active: Antigen exposure, stimulates immune system, antigen specific antibodies and T cells made (ex. vaccines)
Passive: Protectivre antibodies (ex. immunoglobin, antitoxins, breastfeeding
Term
4 types of immunity:
Definition
Naturally acquired Active~ Exposure from antigens from illness, long-lasting
Naturally aquired Passive~ Transfer of anitbodies from mother to infant, lasts only as long as antibodies are present
Artificially acquired Active~ Exposure to antigens from vaccines (immunization), immune response without infection.
Artificially acquired Passive~ Injections of antibodies, short-lived but immediate
Term
What are the requirements of an effective vaccine?
Definition
-It should not harm the person being vaccinated
-It should stimulate the adaptive immunity
-It should result in long-term memory
-It should not require many boosters
-It should protect against the natural pathogen
Term
4 types of vaccine:
Definition
-Live, attenuated bacteria or viruses
-Inactive, killed
-DNA and RNA
-Purified components
Term
Inactive killed vaccine:
Definition
Killed pathogen, no replication, humoral immunity
Term
Live, attenuated bacteria or viruses vaccine:
Definition
Living pathogen with reduced virulence, possibility of mutation, cellular and humoral immunity
Term
DNA and RNA:
Definition
Host cells produce antigen from DNA or RNA, mimics replication in APC cells
Term
Purified components:
Definition
Subunit~ antigen fragments of a microbe, (ex. recombinant subunit vaccine), stimulate immune response
Toxoid~ inactivated toxins, stimulate production of antitoxin antibodies
Polysaccharide~ capsule molecules, not long-term, T-independent
Conjugated~ Polysaccharide bound to a carrier protein, T-dependent
Virus like particles~ virus particles with no genetic material, antigenic but do not harm
Term
Adjuvants def.
Definition
Increase vaccine effectiveness (ex. alumns: recruit leukocytes at site of infection, antigen presentation via MHC II; CpG: mimics bacterial or viral DNA, TLR)
Term
What immune responses do each kind of vaccine cause?
Definition
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Term
Herd Immunity def.
Definition
Large portion of the population is immunized (75% or more), limiting outbreaks
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Term
2 requirements for diseases of Herd Immunity
Definition
-Contagious disease
-Transmitted between humans
Term
What are the 2 arguments for vaccines to those who oppose them?
Definition
-Millions of lives are saved by vaccines
-Vaccines are extremely safe
Term
Serology def.
Definition
Branch of immunology that views the content of serum, specifically the concentration of antigens and antibodies
Term
Sensitivity (of seriology) def.
Definition
How many antibody or antigen molecules must be present to result in a positive test/the lowest concentration the test can detect.
False negatives happen if concentration is below detection threshold.
Term
Specificity (of serology) def.
Definition
Measures how selective an antibody is to an antigen.
False positives happen if test is not specific enough, and picks up on something similar.
Term
Monoclonal antibodies (Mabs)
Definition
Antibodies produced from a single hybridoma clone, epitope-specific antibodies, good diagnostic
Term
Hybridoma Clone
Definition
Cancerous cells fused with a normal antibody-producing B-cell to produce monoclonal antibodies rapidly, made from animal models
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Term
Polyclonal antibodies
Definition
Antiserum that contains all isotopes of with specificities of many epitopes of an antigen, less sensitive and less specific
Term
Immunoprecipitation
Definition
Soluble antigens with antibodies, antibody-antigen complexes form interlocking molecules->precipitate, need optimal antibody to antigen ratio
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Term
Zone of equivalence (immunoprecipitation)
Definition
Antigens=antigen binding sites, visible precipitate
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Term
Agglutination
Definition
Insoluble antigens on whole cell with antibodies, antibody-antigen complex identifies bacterial pathogen and blood type, clumping=positive result
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Latex bead could be replaced with blood cell.
Term
Immunofluorescence Microscopy
Definition
Fluorecent dyes combined with antibodies attach to antigens, use fluorescent microscopy to identify microorganisms that are hard to grow
Term
Direct vs. indirect immunofluorescence test
Definition
Direct~ reveals pathogenic organisms in tissue
Indirect~ reveals pathogen-specific antibodies in serum
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Term
Enzyme-linked immunosorbent assay (ELISA)
Definition
Enzyme-linked antibody, converts colorless substrate into a colorful product, can detect antibody or antigen
Term
Direct (ELISA)
Definition
Detects antigen in patients serum, enzyme-conjugated antibody
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Term
Indirect (ELISA)
Definition
Detects primary antibody from patient's serum with known antigen, secondary conjugated antibody
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Term
Sandwich (ELISA)
Definition
Detects antigen from patients serum using capture antibody, secondary antibody and enzyme-conjugated antibody
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Term
Titer def.
Definition
The measurement used to express antibody or antigen concentration in a solution
Term
What can a sandwich ELISA detect?
Definition
-The titer of IgM antibody that binds to a specific antigen (means a new disease)
-The antigens in a patient's blood
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Term
Immunochromatographic
Definition
Antigen or antibody test using capillary action on an absorbant pad
Positive test has 2 lines (test and control)
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Term
Commercial Point-of-Care tests
Definition
Same concept as immunochromatographic, but specificity is sacrificed for rapid results
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Term
Advantages and disadvantages of Point-of-Care tests
Definition
Advantages:
-No culturing required
-Clinicians can immediately prescribe antibiotics and determine the chain of infection
Disadvantages:
-No data about pathogen antibiotic resistance
-Increased risk of clinician becoming infected
-Multiple infections may be overlooked
Term
Pathogenesis def.
Definition
The process in which a pathogen causes a disease
Term
What are the 5 steps of pathogenesis?
Definition
1. Entry into host
2. Attachment and colonization
3. Avoidance of host immunity
4. host damage
5. Exit from host
Term
Virulence factor def.
Definition
Traits of a pathogen that enhance the pathogen's disease-causing ability
Term
What are some examples of virulence factors?
Definition
-Pili
-Capsules
-Secretion systems
-Enzymes inactivating antibiotics
-Toxins
Term
Genomic Island
Definition
A region of DNA that has indicators that it came from another organism, recognized by different GC (nucleotide) content from the rest of the DNA
Contains gene homology to phage or plasmid genes
Encodes clusters of genes that increase host fitness
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Term
Pathogenicity Island
Definition
A genomic island that contains virulence factors
Term
Ways of entry/exit into/from the host:
Definition
-The eye
-Fecal-oral route
-Respiratory route
-Skin
-Parenteral (bloodstream) route
-Urogenital route
Term
Invasiveness def.
Definition
Ability of a bacterial pathogen to spread rapidly through tissues
Term
Invasion def.
Definition
Entry of a pathogen into a living cell, where it then lives
Term
Hyalurodinase def.
Definition
An enzyme that breaks down the extracellular matrix of host tissue
Term
Collagenase def.
Definition
An enzyme that breaks down collagen in host tissues
Term
Adhesins def.
Definition
Microbe factors that promote attachment (ex. pili/fimbriae or non-pilus adhesins)
Term
Parts of a pilus:
Definition
Pilin protein~ identical repeating subunits
Adhesion protein~ binds to host cell receptors
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Term
Steps of pilus assembly
Definition
1. Assembly starts with adhesion protein
2. Pilin proteins are added and push the tip further out
3. Tip binds to host
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Term
Type IV pili:
Definition
Dynamic, thin, and flexible for twitching motility
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Term
Non-pilin adhesins characteristics and examples
Definition
-Often works in conjunction with pilin
-Often binds tighter than pilin
Ex. M proteins, Peractin
Term
Why is biofilm formation helpful?
Definition
Biofilms help microbes adhere to any surface, with nutrient flow, and quorum sensing
Term
IgA protease def.
Definition
Extracellular enzymes made by microbes to destroy IgA antibodies
Term
Antigenic variation def.
Definition
Altering surface antigens to evade the adaptive immune response
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Term
Type I pili:
Definition
Static, hair-like appendages used only for attachment
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Term
Capsules (Extra. pathogens)
Definition
Prevent phagocytes from binding, overriden by opsonization
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Term
Cell surface proteins (protein A) (Extra. pathogens)
Definition
Bind to the Fc region of antibodies (prevents antigen attachment
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Term
Enzymes (Extra. pathogens)
Definition
Degrade antibodies
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Term
Interfering with cytokine signaling (Extra. pathogens)
Definition
-Imitation of host cytokines
-Cause host to produce cytokines
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Term
Varying surface antigens (Extra. pathogens)
Definition
Avoid immune detection
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Term
Cell-cell communication (Extra. pathogens)
Definition
Can regulate virulence genes expression
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Term
Extracellular pathogens
Definition
Live outside the cells of the host
Term
Intracellular pathogens
Definition
Avoid innate and humoral immune response by living inside host cells
Term
Facultative intracellular pathogen
Definition
Can invade host cells but can also survive outside of the host cell
Term
Obligate intracellular pathogen
Definition
Invade and reproduce inside a host cell only
Term
Phagocytic pathway (Intra. pathogens)
Definition
Preventing fusion of phagosome with lysosome, then escape
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Term
Membrane ruffling (Intra. pathogens)
Definition
Type III secretes effector proteins that affect gene expression and loosen tight junctions
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Term
Ways to damage the host cell:
Definition
-Immunopathology~ immune response
-Microbial growth and metabolism (using host nutrients and direct damage to host cells)
-Toxins
Term
Siderophores def.
Definition
Substance that binds to iron more tightly than human iron-binding proteins. Both humans and bacteria need iron to survive
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Term
How can microbes steal iron from a host?
Definition
-Siderophores
-Brusting RBCs using hemolysin (a toxin)
-Binding to host iron binding proteins (preventing host from binding iron)
Term
Toxin def.
Definition
Poisonous substance produced by certain microorganisms, often contributes to pathogenic properties, causes damage to host cells
Term
Toxigenicity def.
Definition
Capacity to produce toxins
Term
Intoxications def.
Definition
Effects of pathogenesis that is due to the toxin (not microbial growth)
Term
Toxemia def.
Definition
Prescence of toxins in the blood, can be fatal (also fatal in lymph)
Term
Exotoxins vs. endotoxins
Definition
Exotoxins~ produced inside some bacteria as part of growth and metabolism, then released outside of the bacteria
Endotoxins~ toxin is part of the bacterial cells, released when cells divide or bacteria are destroyed
Term
Two subunit AB toxins (exotoxin)
Definition
B subunit~ binds host cell receptors, delivery system, usually arranged in rings of 5
A subunit~ toxic, enzyme the transfers ADP ribose onto target, inactivating or altering it
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Term
8 Exotoxic modes of action
Definition
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Term
Lipid A (endotoxin)
Definition
Part of the LPS on gram-negative bacteria, heat-stable, causes: fever, clotting factors, complement factors, vasodilation. shock, death
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Term
Bacterial source of exotoxins vs. endotoxins
Definition
Exotoxins~ gram-negative and gram-positive
Endotoxins~ gram-negative
Term
Toxicity of exotoxins vs. endotoxins
Definition
Exotoxins~ high toxicity, small lethal dose
Endotoxins~ low toxicity, large lethal dose
Term
Immunology of exotoxins vs. endotoxins
Definition
Exotoxins~ Can be converted to toxoids, neutralized by antitoxins
Endotoxins~ Not easily converted to toxoids, or neutralized by antitoxins
Term
What do Secretion systems do?
Definition
Deliver exotoxins and other secreted virulence proteins
Term
Type I secretion system:
Definition
General secretion pathway, SecA-dependent, delivers one effector per system
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Term
SecA def.
Definition
A bacterial export protein that exports virulence proteins to the periplasm of Gram-negative bacteria
Term
Type II secretion system:
Definition
General secretion pathway + 'piston' delivery, SecA-dependent, derived from type IV pili genes
[image]
Term
Type III secretion system:
Definition
SecA independent, 'syringe-shaped', derived from flagella genes, secretes multiple effectors from the bacterial cytoplasm directly to the target host cell cytoplasm
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Term
Type IV secretion system:
Definition
Derived from conjugational DNA transfer genes, 'tube-shaped', secrete multiple effectors
[image]
Term
2 Ways for intracellular pathogens to bypass phagocytosis:
Definition
-Cytoskeleton arrangements
-Membrane ruffling
Term
Parts of the Upper Respiratory system:
Definition
[-Nasal cavity
-Oral cavity
-Pharynx (throat)
-Larynx (voice box)]
-Middle ear
-Eustachian (auditory) tubes
-Other ducts and sinuses
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Term
Parts of the Lower Respiratory system:
Definition
-Trachea
-Bronchial tubes
-Bronchioles
-Alveoli (air sacs that exchange gas)
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Term
Pneumonia def.
Definition
Pulmonary alveoli are affected (inflamed or another issue)
Term
Where are IgA antibodies secreted?
Definition
Nasal cavity, mucus, tears
Term
What does hair in nasal passages do?
Definition
Filter particles, prevent from getting into the lungs
Term
What does mucus and the mucociliary escalator do?
Definition
Move inhaled particles out of the lungs, towards the throat
Term
What do alveolar macrophages do?
Definition
Locate, ingest, and destroy microbes in the lung tissue
Term
Purpose of small intestine:
Definition
Absorption: end products of digestion are diffused into the blood to be distributed throughout the body
Term
Purpose of large intestine:
Definition
Water and remaining nutrients are absorbed, end up with undigested solids (feces)
Term
Parts of the Gastrointestinal tract:
Definition
-Oral cavity
-Pharynx
-Esophagus
-Stomach
-Small and large intestines
Accessory structures outside of GI tract: salivary glands, liver, gallbladder, pancreas
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Term
What do Paneth cells do?
Definition
Phagocytize bacteria in the small intestine, produce defensins (antimicrobial peptides)
Term
Gastroenteritis def.
Definition
Disease causing inflammation of the stomach and intestinal mucosa, causes diarrhea/vomiting
Term
Oral rehydration therapy def.
Definition
Replacing lost fluids and electrolytes
Term
Dysentery def.
Definition
Severe diarrhea with blood or mucus
Term
Enterotoxin def.
Definition
A toxin produced in or affecting the intestines
Term
Infections vs. intoxication of GI tract:
Definition
Infection~ pathogen enters GI tract and divides, grow or pass through systemic organs, takes time, fever is common
Intoxication~ ingestion of preformed toxins, sudden, no fever
Term
Purpose of digestive system:
Definition
Break down food, absorb nutrients, eliminate waste
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