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Microbes and virulence
Vectors, pathogen, virulence, reservoir.
48
Microbiology
Undergraduate 2
05/18/2014

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Cards

Term
Diagram the Inflammation response
Definition

This needs to include:

Mast cells, Histamine, Dendrites

Neutrophil, integrin, Eselectin from membrane.

Vasodilation causing heat, pain, redness, swelling

Monocyte, macrophage.

(non specific response)

Term
Draw out the 3 complement protein activation
Definition

1) Classical pathway -> Antigen/antibody

2) Alternative pathway -> Complement proten binds to pathogen

3) Lectin pathway-> Antibodies can bind to the lectin and manose on the pathogen

Term
Define the T cells (Cellular response)
Definition

Tc - Cytotoxic T cells (CD8)

Th - Helper T cells (CD4)

Th1 - Stimulates Macrophage growth, releases cytokines

Th2 - Stimulates B cells to produce more antibodies

Term
Allergy Immune response types
Definition

Type I - Accute/immediate.  Seconds

Type IV, Delayed, cell mediated.  Hours to show.

Term
Describe a type I allergen response
Definition

Antigen triggers a B cell response.  IgE produced instead, the IgE is a receptor for Mast cells.

Mast cells release histamine.

Term
Define Type IV allergy response
Definition
ANtigen presenting cell reaction ocurs macrophages and t cells migrate to the locations.
Term
What protein is required for opsonization?
Definition
C3b
Term
How is opsonization carried out?
Definition
Antibodies and complement proteins bind to cell.  Phagocytes recognize IgG and complement protein C3b and are drawn to the pathogen.  Makes it easier for engulfment.
Term
Name the 3 complement proteins we care about
Definition

IgG - Prevalent.  Long term protection, in blood and tissues 

IgM - Initial response, large sized

IgE - Part of the mast cell response

Term
What are the 4 main ways we use adaptive immunity
Definition

Specificity (One responder to one stimulus)

Diversity (Antibodies, light chain receptors vary)

Tolerance (Recognizes self)

Memory (Memory B&T cells)

Term
What are regulatory T cells?
Definition
Regulate against autoimmune response
Term
What are Natural Killer cells?
Definition
Respond to virally infected cells/cells missing MHCI proteins
Term
What is opsonization?
Definition
A pathogen identified by the body and marked for phagocytosis.
Term
What is an epitope?
Definition
The recognized portion of an antigen that antibodies can identify and bind with.  Either shown on an antigen presenting cell or on the pathogen itself.
Term
How do cytotoxic T cells kill the infected cells?
Definition
They release perforin to create holes in the cell, then send in Granzyme to the cell to stimulate aptopsis
Term
What are the identifying factors for bacteria on skin cells?
Definition

Drying, salty, pH 4-6, antimicrobial peptides in sweat glands, Lysozymes destroy cell walls (gram positive)

Microflora include gram positive, few gram negative and fungi

 

Term
What are the identifying factors for microbes in the oral cavity?
Definition

Moist, anaerobic, antribacterial compunds

Microflora:  Biofilms of mixed cultures.

High sugar increases, attachment, organic acids, gingivities, caries and cavities

Term
What are the identifying features for bacteria in the respiratory tract?
Definition

Mucus/mucuciliatory escalator carries out bacteria

Microflora:  Mixed culture/pathogens.  

Eyes: Contain lysozomes to help control bacteria.

Term
What are the identifyiing features for bacteria in the GI tract?
Definition

Nutrients, pH variations and Anoxic (No O2)

Microflora Mixed culture, provides us with B12 and K

 

Stomach pH 2 (Heliobacter and Strptococcus live)

Duodenum ph 4-5

Ilum and colon ph7

 

Term
Draw the exposure chart
Definition
Exposure to pathogen -> Adherence (Skin or mucosa) -> invasion throug the epithelium -> Colonization and growth/virulence factors (further colonizing the invasion site)-> Splits to toxicity as toxins effect the local area or systemic area <--> Invasiveness growing out of the intial site furthering exposure -> Tissue damage/disease.
Term
Explain the 5 steps of infection
Definition

Incubation period (low # of organisms)

Prodromal response (general/vague symptoms as organisms increase)

Illness (Most severe symptoms, high #organisms)

Decline (Decrease of symptoms and organisms)

Convalescence (No signs or symptoms)

Term
Define the difference between signs and symptoms.
Definition

Signs - Evidence (Fever, rash, swelling)

Symptoms - Subjective (pain, malaise, fatigue)

Term
What are the 3 types of symbiosis
Definition

Mutualism - Everyone benefits

Commensalism - One benefts the other is neutral

Parasitism - Host is harmed

Term
Describe toll like receptors
Definition
Anchored in membranse of macrophages and dendrtes.  Recognizes peptidoglycan, lipopolysaccharide and flagellin.
Term
Describe nod like receptors
Definition
Cytoplasmic proteins that detect bacterial componants in cells
Term
Describe rig like receptors
Definition
Cytoplasmic proteins that recognizes bacterial DNA viral dsRNA and ssRNA.
Term
What are interferons?
Definition
When a cell recognizes it has been infected, interferons are released to neighboring cells to prime them for activaton in case they are infected stimulating PKR (antiviral protein) production.
Term
What are the complement proteins used in the inflammation response?
Definition
C5a and C3a.  They cause mast cells to release pro-inflammatory cytokines
Term
How do bacteria avoid the bodies natural defenses?
Definition

Biofilm growth

Siderophores (Bind to iron)

Avoidance of secretory IgA (Mucosal IgA)

Pili turnover

IgA proteases

Term
How does a bacteria colonize?
Definition
Adhesions on the end of pili attach to a receptor.
Term
How do pathogens invade the cellular barriers?
Definition

1) Direct uptake (Pathogen induces the host cell to engulf it by endocytosis.  Salmonella uses type III secretion sytem to inject in effector proteins)

2) Hiding in a host cell (Shigella directly transfers from cell to cell using actin)

3) Avoiding the complement system proteins (N gonorrhoeae binds the complement proteins to avoid the membrane attack complex)

Term
What do Defensins do?
Definition
Disrupt the microbial membranes
Term
What do interferons do?
Definition
Inhibit replication of viruses.
Term
Describe the arrangement of antibodies/B cell receptor/T cell receptors
Definition
Consist of 2 heavy chains and 2 light chains.  The tops of the heavy and light chains contain a variable antigen binding site region that will only activate with the proper epitope.
Term
Describe the antibody growth curves
Definition
Lag period.  IgM is released (5-15 days) IgG production picks up around 15 days and takes over the IgM.  IgM is an indicator of current disease, IgG is an indicator of past disease.
Term
Define primary and secondary immune responses
Definition

Primary: IgM responds, IgG responds after 15 days and then declines

Secondary:  IgM responds, IgG responds more rapidly and with higher antibody production from plasma cells.  More memory cells created.

Term
Describe how vacines work with the primary and secondary responses
Definition

Primary: Antigen injected, IgM response started.

Secondary: Antigen injected again, IgG response is prevalent.

Term
Describe the antigen ELISA test
Definition

Antigen is attached to micro well

Serum is added, the complimentary antibody binds to the antigen

Enzyme linked antibody added, attaches to the complementary antibody

Substrate added to well, any enzyme linked will change the color in the well.

Term
What is Epidemiology?
Definition

Measures a disease in a population

Makes determinations regarding the cause of the disease

Applies knowledge to control public health problems

Term
What are the 3 types of epidemiological studies?
Definition

Descriptive

Analytical

Experimental

Term
What does the Descriptive studies branch of epidemiology look at?
Definition

Physical aspects of an existing disease.  

# of cases

Segments of affected population

Location and time of cases.

Term
What does the analytical studies branch of epidemiology look at?
Definition

Cause and affect.  

Attempts to determine the probable cause, mode of transmission and methods of prevention

Used in situations where Koch's postulates can't be applied.

Term
What are the 2 sub branches of the analytical studies branch of Epidemiology?
Definition

Retrospective - Looks at preceding events.  Uses a control group

Prospective - As the epidemic spreads.  Determines susceptibilities and resistance.  Determines if things can be changed to stop the spread.

Term
What does the Experimental Studies branch of epidemiology look for?
Definition
Hypothesis testing.  Find the reservoirs of infection, portals of entry and mechanisms of transmission.
Term
Define Incidence and Prevalence
Definition

Incidence:  Number of *new* cases in a population during a specific time period.

 

Prevalence: Total number of people infected at a given time.  Severity and length of the disease

Term
Define Morbidity and Mortality.
Definition

Morbidity:  Number of individuals affected during a set period of time in relation to total pop.

 

Mortality:  Number of deaths in a population during a specific time period.

Term
Draw and lable the Epidemiological Triad
Definition

Host <-> Infectious agent (infectivity, pathogenicty, virulence <-> Environment

 

All around the vector.

Term
What are the main virulence factors of infectious agents?
Definition

Adhesion factors

biofilms/capsules

Extracellular enzymes

Toxins

Immune evasion

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