Shared Flashcard Set

Details

MCP 1-08 - Mendelian Patterns of Inheritance
SUNY Upstate College of Medicine Class of 2015
68
Biochemistry
Professional
09/10/2011

Additional Biochemistry Flashcards

 


 

Cards

Term
Phenotype
Definition
An organism's observable characteristics or traits: such as its morphology, development, biochemical or physiological properties, behavior, and products of behavior (such as a bird's nest). Phenotypes result from the expression of an organism's genes as well as the influence of environmental factors and the interactions between the two.
Term
Genotype
Definition
The genetic makeup of a cell, an organism, or an individual (i.e. the specific allele makeup of the individual) usually with reference to a specific character under consideration. It is generally accepted that inherited genotype, transmitted epigenetic factors, and non-hereditary environmental variation contribute to the phenotype of an individual.
Term
Mode of inheritance
Definition
The manner in which a particular genetic trait or disorder is passed from one generation to the next. MOIs to know include:
1) Autosomal dominant
2) Autosomal recessive
3) X-linked dominant
4) X-linked recessive
5) Codominant
6) Mitochondrial
7) Y-linked
8) Sex limited
Term
Mendelian disorders
Definition
Genetic diseases which result from mutations in just one gene i.e. severe mutations in just one gene are sufficient to result in the expression of the disease.
Term
Multifactorial disorders
Definition
Genetic diseases which require mutations in multiple genes at the same time and which are often more sensitive to changes in the environment.
Term
Chromosomal disorders
Definition
The result of problems at the chromosomal level (e.g. deletions, translocations, etc.).
Term
What percentage of alleles do first degree relatives share?
Definition
For the most part, first degree relatives share half their autosomal alleles in common with each other, (though this will depend on their gender when considering X-linked genes and mitochondrial genes). This means that the “risk” is typically halved by each connection between individuals in a pedigree because of “independent assortment” in meiosis.
Term
What is the chance that an allele at an autosomal gene is 'shared by descent' between a grandparent and grandchild?
Definition
1 in 4 (1/2 X 1/2).
Term
Assume your father is known to carry an autosomal recessive mutation. What are the chances his sister (your aunt) also carries this autosomal recessive mutation?
Definition
1/2. For the most part, first degree relatives share half their autosomal alleles in common with each other.
Term
How are autosomal recessive mutations inherited?
Definition
One allele is inherited from their mother and one from their father. Typically both parents will be unaffected “silent” carriers of a recessive mutation
Term
If two parents carry an autosomal recessive allele, where did these mutations come from?
Definition
Ignoring the small chance that they are the result of random mutations, then they were inherited from two of the four grandparents (i.e. one of the father’s parents and one of the mother’s parents (and so on back into their ancestry i.e. 2 of the 8 great grandparents etc.).
Term
Punnett square
Definition
Method used to predict offspring when the parental genotypes are known. Punnett squares help conceptualize the recurrence risk of genetic diseases in families who have already had an affected child or are otherwise known to be carriers. They also help predict recessive carrier risks in relatives of affected patients.
Term
T or F: It is usually phenotypically evident whether an individual carries one copy of a recessive mutation?
Definition
False. Mostly it is impossible to tell based on phenotype alone. It is thought we all carry some recessive mutations, but fortunately usually at different genes than our spouses.
Term
Phenocopy
Definition
A mimic of a phenotype that is usually determined by a specific genotype, produced instead by the interaction of some environmental factor with a different genotype.
Term
Locus heterogeneity
Definition
A situation when the same phenotype (genetic disease) can result from mutations at different genes.
Term
Allelic heterogeneity
Definition
The typical phenomenon of different mutations occurring at the same gene.
Term
Do locus heterogeneity and allelic heterogeneity always appear exclusively?
Definition
No, these can both occur simultaneously. For example, retinitis pigmentosa can result from many mutations (allelic heterogeneity) at many different genes (locus heterogeneity).
Term
Phenotypic heterogeneity
Definition
The variation in phenotype that can occur in patients with mutations in a specific gene this could include variation in expression (mild versus severe) of a disease, the presence or absence of any phenotypic effect (i.e. disease penetrance) or even different diseases e.g. Hirschsprung disease and Multiple endocrine neoplasia type II result from mutations in the same gene (RET).
Term
Expression
Definition
Describes variability in the severity of the disease. (For example, mild versus severe.)
Term
Penetrance
Definition
The presence or absence of any phenotypic effect. Penetrance only considers whether individuals express the trait or not. Expressivity considers the degree of expression of the given train.
Term
Dominant allele
Definition
An allele that expresses its phenotypic effect even when heterozygous with a recessive allele. For example, if A is dominant over a, then AA and Aa have the same phenotype.
Term
Recessive allele
Definition
An allele whose phenotypic effect is not expressed in a heterozygote (e.g. Xx). The phenotype is only expressed when the paired allele is identical (e.g. xx).
Term
What conditions determine whether an allele is dominant or recessive?
Definition
If there is sufficient gene product from a single normal (wild type) allele in a recessive MOI then it will be recessive, but not in a disease with a dominant MOI.
Term
Codominance
Definition
A situation in which both alleles are equally stong and both alleles are visible in the hybrid genotype-- the heterozygotes can be distinguished from the homozygotes. An example of codominance is found in chickens. When white chickens are crossed with black chickens, the result is not a grey chicken, but a chicken with both black and white feathers.
Term
Wild type allele
Definition
The phenotype of the typical form of a species as it occurs in nature.
Term
Mutant allele
Definition
The phenotype resulting from mutation, contrasts with normal/wild type.
Term
Male-to-male transmission of a disease suggests which MOI?
Definition
Probably autosomal.
Term
What are the odds that the unaffected offspring of two carrier parents of an autosomal recessive disease is also a carrier? What are the odds that the couple's future children will be carriers? Affected?
Definition
Unaffected child: 2/3
Future children carriers: 2/4
Future children affected: 1/4
Term
Which sex is preferentially affected by x-linked recessive disorders?
Definition
Males, because they only inherit one X chromosome from their parents. The pedigree will often appear as though the disease has jumped generations via asymptomatic females.
Term
What can be said about the female offspring of a male affected with an X-linked mutation?
Definition
They will be carriers since they inherit their father's only X chromosome.
Term
What pattern is generally seen by X-linked dominant disorders?
Definition
On average, twice as many females are affected compared to males, although they are usually more severe or even lethal in males. Affected males have normal sons and affected daughters. Most affected females will be heterozygous so half the offspring of affected females will be affected.
Term
Why are there no known Y linked genetic disorders?
Definition
Most Y linked mutations result in infertility which is not passed on.
Term
Polymorphism
Definition
Two or more clearly different phenotypes exist in the same population of a species. Polymorphism exists when the frequency of an allele increases to over 1%.
Term
Rare genetic variant
Definition
Describes a situation where the frequency of an allele remains at a frequency of less than 1%.
Term
Pleiotrophy
Definition
An example of phenotypic heterogeneity in which the diversity of different tissues involved is difficult to explain and results from the use of the same gene product in multiple tissues and periods of development. This occurs when a single gene influences multiple phenotypic traits. Consequently, a mutation in a pleiotropic gene may have an effect on some or all traits simultaneously.
Term
What's the difference between a germline mutation and a somatic mutation?
Definition
A germline mutation is a permanent change in the DNA that can be inherited through transmission via a gamete, whereas an acquired (somatic) mutation is in the soma and so is not transmitted to the next generation.
Term
Mosaicism
Definition
Occurs as a result of a mutation event that results in a second population of cells differentiated from the original cells only by the new mutation. If the mutation occurs in the germline of an individual it can give rise to more than one child with the same mutation even if the mutation is absent from a different parental tissue such as the peripheral blood. Thus testing DNA isolated from blood may not accurately reveal the genotype of a patient’s gametes.
Term
Gene–environment interaction
Definition
The phenotypic effect of interactions between genes and the environment.
Term
Epistasis
Definition
The phenomenon where the effects of one gene are modified by one or several other genes, which are sometimes called modifier genes. The gene whose phenotype is expressed is called epistatic, while the phenotype altered or suppressed is called hypostatic.
Term
Heterozygous advantage (heterosis)
Definition
The improved or increased function of any biological quality in a hybrid offspring. It is the occurrence of a genetically superior offspring from mixing the genes of its parents.
Term
What is the most likely mode of inheritance?
Definition

[image]

Autosomal recessive. It's unlikely dominant since neither parent is affected, and it's unlikely X-linked because the affected individual is female.

Term
What is the most likely mode of inheritance?
Definition

[image]

Autosomal recessive is still likely, but since affected is male, you can't rule out X-linked. 

Term
What is the most likely mode of inheritance?
Definition

[image]

Autosomal dominant.

Term
What is the most likely mode of inheritance?
Definition

[image]

Mitochondrial inheritance (because mitochondrial DNA is inherited from the mother and all the offspring are affected). Alternatively it could be autosomal dominant and very bad luck.

Term
What is the mode of inheritance for hemophilia A?
Definition
X-linked recessive.
Term
What is the mode of inheritance for cystic fibrosis?
Definition
Autosomal recessive.
Term
What is the mode of inheritance for alpha-1-antitrypsin deficiency?
Definition
Autosomal recessive.
Term
What is the mode of inheritance for Duchenne muscular dystrophy (DMD)?
Definition
X-linked recessive.
Term
What is the mode of inheritance for Tay Sachs?
Definition
Autosomal recessive.
Term
What is the mode of inheritance for sickle cell disease?
Definition
Autosomal recessive.
Term
What is the mode of inheritance for fragile X syndrome?
Definition
X-linked dominant.
Term
What is the mode of inheritance for Huntington disease?
Definition
Autosomal dominant.
Term
What is the mode of inheritance for myotonic dystrophy?
Definition
Autosomal dominant.
Term
Mendel's first law
Definition
The Law of Segregation states that every individual possesses a pair of genes for any particular trait and that each parent passes a randomly selected copy of only one of these to its offspring. The offspring then receives its own pair of genes for that trait. Whichever of the two genes in the offspring is dominant determines how the offspring expresses that trait (e.g. the color of a plant, the color of an animal's fur, the color of a person's eyes).
Term
Under what conditions will a disease have a dominant mode of inheritance?
Definition
If product from a heterozygote is not enough to cross threshold, then mutation is dominant.
Term
Under what conditions will a disease have a recessive mode of inheritance?
Definition
If product from a heterozygote is enough to cross
threshold, then disease is recessive.
Term
Autosomal inheritance
Definition
Gene is located on one of the 22 pairs of
autosomal chromosomes.
Term
X-linked inheritance
Definition
Genes, or traits determined by genes located on the X chromosome.
Term
What are the criteria for a disease to be autosomal dominant?
Definition
1) Most affected individuals will be heterozygous
2) Expressed in every generation; but more likely to
have reduced Penetrance compared to a recessive.
3) Half offspring of an affected individual are
affected (i.e. recurrence risk of 50%)
4) Affected individuals usually have affected parents
5) Normal individuals usually don’t have affected offspring (except for reduced penetrance)
6) Male to male transmission indicates trait probably not X-linked
Term
If a woman is affected with an autosomal dominant disease, what are the odds that her offspring will also be affected?
Definition
1 in 2.
Term
What are the criteria for a disease to be autosomal recessive?
Definition
1) Expect both parents of affected individuals to be carriers
2) Affected individuals usually have asymptomatic parents
3) May appear as a sporadic
4) Often more severe than dominant disorders
5) If rare, parents more likely to be consanguinous
6) Recurrence risk 1 in 4
7) Affecteds have two mutations i.e. are homozygous or compound heterozygotes
Term
What are some of the characteristics of X-linked recessive inheritance?
Definition
1) Usually males affected (hemizygous)
*(unless an affected male marries a carrier female, or extreme X- inactivation)
2) All daughters of affected males are carriers
3) Half the sons of carrier females are affected
4) No male to male transmission (since
pass on their y)
5) Many more affected males than females, mostly males more severe than females (occasionally extreme X inactivation results in mildly affected females)
6) In “genetic lethal” disorders a significant proportion of cases will be due to new mutations
Term
What are some of the characteristics of X-linked dominant inheritance?
Definition
1) Rare
2) Affected males have normal sons and
affected daughters
3) Twice as many affected females as males in population
4) Most affected females will be heterozygous so half the offspring of affected females will be affected
5) Usually more severe or even lethal in males
Term
What is the linkely mode of inheritance?
Definition

[image]

Likely X-linked dominant. Rare. Twice as many females as males affected. Males transmit to all their daughters, affected mothers to half their offspring (irrespective of their sex).

Term
What are some of the characteristics of Y-linked inheritance?
Definition
1) Apart from male infertility, no known Y linked diseases
2) Only males would be affected, all sons affected.
3) Affected males would have an affected father and all their sons would be affected and no affected daughters
4) Only about 78 protein-coding genes on the Y.
Term
Chimera
Definition
A single organism that is composed of two or more different populations of genetically distinct cells that originated from different zygotes involved in sexual reproduction. This is different from a mosaic, where the different cells emerged from the same zygote.
Term
Haplotype
Definition
A combination of alleles at different loci on the chromosome that are transmitted together. A haplotype may be one locus, several loci, or an entire chromosome depending on the number of recombination events that have occurred between a given set of loci.
Term
Hemizygous
Definition
A chromosome in a diploid organism is hemizygous when only one copy is present. The cell or organism is called a hemizygote. Hemizygosity is observed when one copy of a gene is deleted, or in the heterogametic sex when a gene is located on a sex chromosome. For organisms in which the male is heterogametic, such as humans, almost all X-linked genes are hemizygous in males with normal chromosomes because they have only one X chromosome and few of the same genes are on the Y chromosome.
Supporting users have an ad free experience!