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MCDB 135(2) SignalTransduction
Midterm 2
26
Biology
Undergraduate 4
11/12/2006

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Term
ErbB Signaling network
Definition
[image] Cartoon represents how cells communicate with their surroundings. Green area represents ligands, which interact with the various surface receptors which goes through cascade to ultimately provide a biological response (yellow)
Term
Growth Factors
Definition
Relatively small proteins released by some cells, make their way through the intercellular space, and impinge on other cells, carrying with them specific biological signals.
Term
Mitogens
Definition
Factors that stimulate cell proliferation. Example - PDGF. Platelet derived growth factor is a potent stimulator of fibroblasts, which form the connective tissues beneath epithelia
Term
Kinase Signaling Proteins
Definition
Protein kinases operate by removing the high energy gamma phosphate from ATP and attaching it to the hydroxyl groups in the side chains of serine, threonine, or tyrosine residues. Once phosphorylated, the substrate protein may be functionally altered and would therefore alter functions of downstream targets.

Example Src oncogene. Is a phosphoprotein, which means that it carried phosphate groups with it, so it could serve as a substrate for phosphorylation or autophosphorylate.
Term
Actions of Protein Kinases
Definition
[image] This demonstrates that in the presence of Src, the mouse fibroblasts in NIH 3T3 cells are phosphorylated and have noticable bands along the various weight markers.
Term
Inhibitory vs. Stimulatory Phosphorylation
Definition
Picture demonstrates how the Phosphorylation of the Atk/PKB kinase can either activate (angiogenesis) or inactivate (apoptosis/proliferation) cell functions.[image]
Term
Transmembrane receptors
Definition
Once the ligand is bound, kinases present the in cytoplasmic domain of the receptor begin to phosphorylate cytoplasmic proteins, which begin the cascade.
Term
Ligand independent firing
Definition
v-erbB and HER2-onc are examples of mutations that cause constituitive firing of receptors independent of the ligand (GF). HER2-onc has an amino acid subsitution in its transmembrane section, allowing it to fire independently. v-erbB has a drastically altered ectodomain, namely a truncated ligand receptor.
Term
Other causes of ligand independent firing
Definition
The over-expression of ligand receptors can lead to ligand independent firing.
Term
Incomplete (btwn pages 131-141)
Definition
Chromosome rearrangment
Term
Incomplete 2
Definition
autocrine sig.
Term
Incomplete 3
Definition
Staining
Term
TGF Beta
Definition
TGF beta suppresses epitheilial cell division, and functions as a heterodimer. Upon ligand binding, the type II subunit (which has consituitively active serine/threonin kinase domain) is brought within close proximity of the TGF beta type I subunit, which it phosphorylates. This activates the tpye I receptor which phosphorylates the cytosolic proteins (Smad 2/3, which upon phosphorylation binds to Smad 4, which fits in a transcriptional activator) which cascade, suppressing division.
Term
The Patched/Smoothened (Hedgehog) signaling system
Definition
[image] Normally, Smoothened, a seven-membrane spanning surface receptor is functionally inert, being inhibited by patched, which contains 12 transmembrane segments. Under these conditions, Gli is cleaved into a protein that moves into the nucleus, where it operates as a repressor of transcription. However, when the Hedgehog ligand binds to Patched, the latter releases its inhibitory grip on Smoothened, which prevents cleavage of Gli so it becomes an inducer.
Term
Defects in the Patched/Smoothened
Definition
Inactivation mutations (loss of function) on the Patched, or activating mutations on smoothened (gain of function) can cause basal carcinomas, medulloblastomas, and rhabdomyosarcomas.
Term
Signalling by the Frizzled Receptors
Definition
Wnt proteins are factors that represent another type of independent signalling system. They activate receptors of the frizzled (frz) family (multiple transmembrane domains). In the absence of ligand binding, a complex of Axin and Apc allow glycogen synthase kinase (GSK) to phosphorylate B-catenin (proliferation promoting protein) causing its degradation. In the presence of Wnt, B-catenin is spared and therefore promotes proliferation.
Term
Integrins
Definition
Cell Surface receptors that use the components of the extracellular matrix as ligands. (to determine attachment to something to prevent anoikis). Having bound to ligands, these integrins form clusters known as focal adhesions. These prevent anoikis, link to cytoplasmic domains, and cause cytoplasmic domains to activate positive signaling pathways.
Term
FAK
Definition
Focal adhesion kinase. An important signaling molecule that associated with the cytoplasmic domain of integrins. Signals transduced by the FAK are important for reconfiguring shape, motility, and adhesion.
Term
Increased Cell Migration using FAK and v-Src in vitro
Definition
With over expression of FAK, there is an increase in cell migration, as well as with the presents of Src-RT. FAK and Src are dependent on each other, minimal growth without one or the other.
Term
Ras oncogene
Definition
G protein that causes the abrogation of the 2 (presence of mitogenic growth factors and sufficient anchorage) preconditions that need to be satisfied before division and growth can occur.
Term
Ras Signaling cycle
Definition
Ras binds gdp in its inactive state, and gtp in its active, signal-emitting state. The inactive Ras protein is stimulated by a guanine exchange (GEF) factor. This caused the release its GDP and aquire a GTP. This is halted by a GTPase activating protein (GAP) which hydrolyzes the GTP to GDP. Amino acid subsitutions caused by an oncogenic mutation can block GAP, leaving Ras in a perpetually active state.
Term
Roles of Ras
Definition
Ras has many roles in cellular functions, namely in terms of cytoskeleton cell motility, apoptosis, and cell-cycle progression.
Term
Potential of Unregulated Ras cycle
Definition
The mitogen activated protein kinase pathway is downstream from the Ras pathway, so an unregulated Ras protein can ultimately lead to unregulated MAP pathways. The Ras protein activated the MAP kinase kinase kinase(Raf), which phosphorylate the MAP kinase Kinase, (Mek [MapK/ErkK]), which stimulates the MAP Kinase (Erk [extracellular signal-regulated kinases]) This ultimately can lead to changes in protein activity or changes in gene expression.
Term
Myc relation to Ras/Raf Pathway
Definition
After cascade of MAP kinases, the MAP Kinase activates a gene reulatory protein which activated the myc gene to produce Myc
Term
Synergystic Oncogene effects
Definition
The presence of both myc and ras cause a drecrease in the percentage of tumor free mice
Term
MAPK pathways
Definition
Cross talk does occur in the MAPK pathway, in other words there is more than 1 pathway to a given gene expression,.
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