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Lecture 1. Comp Applications and Modeling Unit 1
AIC and HD methods
55
Science
Graduate
03/03/2013

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Term
Induction definition
Definition
hypotheses based on multiple observations
establish reliable associations among sets of facts
Term
Deduction definition
Definition
patterns that must occur if hypothesis is correct
Term
eliminates un-influential variables
Definition
HD method
Term
Induction looks at:
Definition
correlations, patterns
Term
Deduction looks at:
Definition
logic and rational thought
Term
probability looks at
Definition
Likelihood
Term
statistics looks at
Definition
trends
Term
HD approach 3 steps
Definition
1. Question
2. Hypotheses
3. Derive predictions/ test consequences
Term
HD advantages

(2)
Definition
1. Identifies what data are important to collect
2. Allows for progress in science- rejection of hypotheses
Term
difference between science and research
Definition
science has formal experimentation and rejection of formal hypotheses
Term
Is the HD method inductive or deductive?
Definition
deductive
Term
costs and benefits of induction
Definition
useful for forming hypothesis but not very applicable to scientific method
Term
corroborative evidence
Definition
evidence in support of your hypothesis
Term
Three types of scientific investigations (Andersen 2008)
Definition
experiments
descriptive
confirmatory
Term
when are descriptive studies the best?
Definition
When little is known about the subject
Term
when are experimental studies the best?
Definition
when you're building on existing knowledge,
when you need to investigate relationships, and estimate effect size
Term
three tenants of experimental study
Definition
control, treatment, replication
Term
X-bar means
Definition
mean of a random sample
Term
characteristics of a normal distribution
Definition
bell shaped, 50% lie on either side of the mean
mean and median are same
Term
measure of dispersion
Definition
low SD means values are close to the mean, high SD means the values are spread out
The smaller the standard deviation the more concentrated the data
Term
alpha
Definition
significance level
the probability used as criterion for rejection of the null
Term
normally distributed data, alpha is
Definition
0.05, which is 1.96 (two stdevs from mean)
Term
one tailed testing
Definition
testing if value falls either to left or right of mean
Term
two tailed testing
Definition
testing if value falls within either tail
Term
How do you deal with non-normally distributed variables?
Definition
parametric tests
non-parametric tests
transformations
Term
Type 1 error
Definition
rejection of a null when it is true
Term
Type 2 error
Definition
accept the null and draw erroneous conclusion
beta error
Term
power of a stat test is defined as
Definition
1-beta: the prob of correctly rejecting the null when it is false
Term
power is greater when
Definition
larger difference between the mean of the data and null mean
larger for larger alpha
larger for larger pop
larger for smaller variances of sample mean
Term
8 parts of significance
Definition
1.State null and alternative-BEFORE DATA COLLECTION
2.Declare level of significance
3.Collect data
4.Perform statistical tests
5.Get critical value, d.f., and p value for tests
6.State confidence limits
7.Assess null and alternative based on critical values, d.f. and p value
8.State conclusions in terms of biological or other practical significance.
Term
retroduction
Definition
establish research hypotheses about the fact giving processes driving nature
basis for new hypotheses
post hoc
looking at all data
Term
Science
Definition
process of gaining reliable knowledge through experimentation and rejection of tested hypotheses
Term
PIM
Definition
parameter index matrix (how to handle parameters)
Term
phi (in PIM)
Definition
survival
Term
p (in PIM)
Definition
recapture probability
Term
. (in PIM)
Definition
constant
Term
Brownie et all adjust PIM for juviniles
Definition
1234 5234
234 634
34 74
4 8
Term
overdispersion of chat
Definition
>3
most likely violating an assumption
Term
underdispersion of c hat
Definition
<1
most likely violating an assumption
Term
goodness of fit
Definition
how well the data meets the assumptions
have to calculate c hat
use most paramaterized model
Term
only use Goodness of fit for ___?
Definition
Cormack-Jolly-Seber
Term
how do you get to GOF?
Definition
test> bootstrap GOF> chat etc. > 100 simulations
Term
QAIC
Definition
quasi- adjusts AIC according to c hat if it's about 3. for a problem in your data ...non independent parameters... overdispersion...(non normal distribution)
Term
f (in PIM)
Definition
tag recovery
Term
multi model inference (MMI)definition
Definition
making inductive inferences from ALL a priori models
Term
4 components of MMI
Definition
model averaging
unconditional variance
gauging relative importance of variance
confidence sets on models
Term
model averaging
Definition
process of obtaining a weighted average of the estimates using all models

can be done for prediction or for parameters
Term
predictive model averaging
Definition
multiply each prediction (y hat) by its weight and sum them= survival across all models
Parameter= DEPENDENT varible [Y]= B0+B1
Term
parameter model averaging
Definition
model estimate for the parameter (SAS output) and multiply by AICw. Sum for each parameter. Those values are what you use in the equation.
Parameter=INDEPENDENT variable Y=[B0+B1]
Term
conditional variance
Definition
sampling variation due to model selection uncertainty (per model)
Term
unconditional variance
Definition
variance for all models, sum of model variance and weighted variance
Term
What do you report for AIC?
Definition
1. top table (AIC, AICc, wi,...)
2. variables of importance
3. model averaged parameters
4. demonstrate variance/ parameter
Term
Capture Mark Recapture Theory
Definition
any sample of animals that is encountered is an incomplete count of the population
N=n/phat or, true pop=sample/capture prob.
Term
Generalizations of Capture Mark Recapture
Definition
marks aren't just tags
Mark doesn't affect animal
capture probability,phat assumed = over all space and time
Term
use brownie et al for
Definition
hunting/ fishing situations (case 1)
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