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Intracellular Signaling
Cole
37
Biochemistry
Professional
10/10/2011

Additional Biochemistry Flashcards

 


 

Cards

Term

 

 

 

 

Juxtacrine signal transduction

Definition

 

 

 

signaling between cells that are touching

Term

 

 

 

What signaling molecules use intracellular receptors? (4)

Definition

 

 

steroid hormones

thyroid hormone

vitamin D3

retinoic acid

Term

 

 

 

 

ligand (cell signaling)

Definition

 

 

 

molecule that binds to a receptor protein

Term

 

 

 

 

 

agonist

Definition

 

 

 

 

ligand that activates signal transduction

Term

 

 

 

 

antagonist

Definition

 

 

 

ligand that inhibits signal transduction

Term

 

 

 

ligand specificity

Definition

 

 

 

 

 

ligands have different effects in different cells

 

ex: acetylcholine

Term

 

 

 

kinases target: (3 aa)

Definition

 

 

serine

threonine

tyrosine

Term

 

 

 

Ca2+ role in intracellular signaling

Definition

 

 

 

second messenger

Term

 

 

 

 

cyclic AMP (cAMP) role in intracellular signaling

Definition

 

 

 

second messenger

Term

 

 

 

 

GMP role in intracellular signaling

Definition

 

 

 

 

second messenger

Term

 

 

 

 

DAG (diacylglycerol) role in intracellular signaling

Definition

 

 

 

second messenger

Term

 

 

 

 

 

IP3 role in intracellular signaling

Definition

 

 

 

 

 

second messenger

Term

 

 

 

 

 

tyrosine kinase role in intracellular signaling

Definition

 

 

 

enzyme effector

Term

 

 

 

 

adenylyl cyclase role in intracellular signaling

Definition

 

 

 

enzyme effector

 

it's an integral membrane protein

Term

 

 

 

in general, phosphatases (activate/inactivate) and kinases (activate/inactivate) enzymes

Definition

 

 

 

phosphatases inactivate

 

kinases activate

Term

 

 

 

Accessory proteins

Definition

 

necessary for intracellular signaling--facilitate interactions by binding and concentrating soluble signaling molecules to spec subcellular locations

 

3 typers:

Scaffold proteins

adaptor proteins

anchoring proteins

Term

 

 

 

 

G proteins

Definition

 

 

 

bind and hydrolyze GTP (GTPases)

Term

 

 

 

3 mechanisms of termination of signal transduction

Definition

 

 

 

1. reduce agonist availability

2. internalize and/or degrade agonist-receptor complex

3. modify receptor to inactivate it

Term

 

 

 

 

Epidermal growth factor (EGF), platelet-derived growth factor (PDGF), insulin

Definition

 

 

receptor tyrosine kinases

 

3 domains: amino terminal (extracellular), transmembranous, carboxyl terminal (intracellular)

Term

 

 

 

 

tyrosine kinase activation

Definition

 

binding of growth factor to receptor triggers dimerization, activating the kinase domain-->self-phosphorylation-->activation-->anchoring sites for other proteins-->signal cascade

Term

 

 

 

 

 

Ras

Definition

 

 

 

GTPase (GDP bound--inactive, GTP bound--active) involved in cell proliferation

 

 

elevated expression in ~30% of tumor cells

Term

 

 

 

 

MAP (mitogen-activated protein) kinases

Definition

Ras (GTPase)

activates

MAP kinase-kinase-kinase

which activates

MAP kinase-kinase

which activates

MAP kinase
which alters gene expression and/or cytosolic/membrane protein activiity

Term

 

 

 

Transporting Growth Factor-β (TGF-β) and Bone Morphogenic Proteins (BMP)

Definition

 

growth regulatory factors required for fetal/neonatal development and maintenance of differentiated phenotype in adults

 

mutations-->CANCER

 

binding to receptors-->dimerization/activation of serine-threonine kinases

Term

 

 

 

serine-threonine kinases

Definition

 

 

 

dimerize and activate upon binding of TGF-beta and BMP

 

recruit and phosphorylate SMADs, which bind DNA regulatory proteins in nucleus, activating or depressing gene expression

Term

 

 

 

 

SMADs

Definition

 

 

 

bind to DNA regulatory sequences, activating or depressing gene expression

 

activated by serine-threonine kinases

part of BMP/ TGF-β signaling cascade

Term

 

 

 

Cytokines

Definition

 

 

 

autocrine/paracrine regulators of growth and differentiation

 

include interleukins and interferons

 

Term

 

 

 

 

cytokine binding to membrane receptors

Definition

dimerization, binding to cytoplasmic nonreceptor tyrosine kinases

 

-->activate STATs thru phosphorylation/dimerization-->bind to genes and activate DNA

 

-->also activate NFκB (involved in immune/inflammatory response) or MAP kinases

Term

 

 

 

 

GPCR (G Protein Coupled Receptors)

structure

Definition

 

 

 

superfamily of receptors--7 α-helical transmembrane-spanning domains

 

beta and gamma subunits are similar in all types, alpha subunit varies (specificity)

 

alpha subunits contain sites of interaction/binding

Term

 

 

 

GPCR αI vs αS

Definition

 

 

I=inhibitory (adenylate cyclase-->dec cellular cAMP)

 

S=stimulatory (adenylate cyclase--> inc cellular cAMP)

Term

 

 

 

GPCR

basal state

active state

deactivation

Definition

 

basal state: bound to GDP, heterotrimeric structure

 

active state: bound to GTP, α subunit detaches

 

deactivation (signal termination): phosphorylation of receptor by kinases (e.g. PKA)

Term

 

 

 

 

cAMP synthesis and degradation

Definition


synth: ATP + adenylyl cyclase--> cAMP

 

degradation: cAMP +cAMP phosphodiesterase (PDE)-->AMP

Term

 

 

 

 

adenylyl cyclase

Definition

 

 

 

transmembrane protein, when activated/inactivated by G proteins, inc/dec cAMP production

Term

 

 

 

PKA and cAMP

Definition

 

 

PKA inactive=tetramer w cAMP binding sites

cAMP binding-->dissociation, exposes kinase sites

 

PKA phosphorylates CREBs, which control expression of cAMP-responsive regulatory elements (CRE)

Term

 

 

 

 

CREBs

Definition

 

control expression of CRE, important in gene activation

 

regulated by PKA, which is activated by cAMP

Term

 

 

 

cGMP

action

synth/deg

 

 

Definition

 

 

regulates cellular contractility and blood volume homeostasis

activates PKG, binds heme, stimulated by NO

 

synth: guanylate cyclases

degradation: cGMP phosphodiesterases

Term

 

 

 

Ca2+ based signal transduction

Definition

 

 

channels contain IP3 receptor, a second messenger generated by phospholipase C (stim by hormones/NT)

Term

 

 

 

 

cross talk

Definition

 

 

cells are subjected to many many stimuli @ any given moment

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