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Genetics
CH. 13: TRANSLATION mRNA
43
Biology
Undergraduate 4
10/02/2012

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Term
alkaptonuria
Definition
-disease studied by Garrod
-suggested that some genes encode enzymes
--identification of the inheritance patter of alkaptonuria as autosomal recessive
Term
"Neurospora" mutants
Definition
-Beadle & Tatum studied
-were altered in their nutrition requirements
-hypothesized that one gene encodes one enzyme (later modified)
Term
one gene does not encode one enzyme because?
Definition
1. some proteins aren't enzymes
2. some proteins are composed of 2 or more different polypeptides
3. some genes encode RNAs that are not translated into polypeptides
Term
the sequence of codons in mRNA
Definition
-used in translation via tRNA molecules to makes a polypeptide with a specific amino acid sequence
Term
genetic code
Definition
=relationship between 3 base codons in mRNA & aa that are incorporated into a polypeptide.
Term
AUG
Definition
-a start codon
-determines reading frame of mRNA
Term
examples of stop codons?
Definition
UAA, UAG, UGA
Term
T4 phage experiment
Definition
-studied by Crick
-mutations in T4 phage-> genetic code is read in triplets
--characteristic of proflavin that was impt: it causes single insertions or deletions in DNA sequences
Term
genetic code has no exceptions, is completely universal
Definition
false
Term
used to decipher genetic code
Definition
synthesized RNA & cell-free translation
by Nirenberg
Term
polypeptide formation
Definition
-peptide bonds between adj aa
-directionality from amino terminus -> carboxyl terminus (parallels arrangement of codons in mRNA in 5->3 dir)
Term
aa differ in?
Definition
side chain structure
Term
responsible for organism's traits
Definition
structure & function of proteins
Term
primary structure of proteins?
Definition
sequence of aa
Term
secondary structure of proteins?
Definition
repeating folding patterns such as alpha helix & beta sheet)
Term
tertiary structure of protiens?
Definition
additional folding
Term
quaternary structure of proteins?
Definition
binding of multiple subunits to each other
Term
anticodon in tRNA
Definition
-complementary to codon in mRNA
--tRNA carried aa that corresponds to codon in mRNA according to genetic code
Term
recognition between tRNA & mRNA not due to chemistry of aa that is attached to tRNA
Definition
True, determined by Raney nickel
Term
resembles cloverleaf?
Definition
secondary structure of tRNA
-anticodon in 2nd loop
-aa attached to 3' end
Term
Aminoacyl-tRNA synthetases
Definition
=grps of enzymes that attach the correct amino acid to tRNA
-->resulting tRNA= charged tRNA or aminoacyl-tRNA
Term
wobble rules
Definition
allows mismatching betwen pairing of tRNAs & mRNA
Term
ribosomes
Definition
=site of polypeptide synthesis
-sm & lrg subunits: rRNAs + multiple proteins
-contains A, P, and E site
-->which are occupied by tRNA molecules
Term
A, P, & E site
Definition
of ribosome
A: aminoacyl
P: peptidyl
E: exit
Term
3 stages of translation?
Definition
1. initiation
2. elongation
3. termination
Term
Initiation stage of translation
Definition
=mRNA, initiator tRNa, & ribosomoal subunits assemble
-involves IF (initiation factors)
Term
Shine-Dalgarno
Definition
-in bacteria
-promotes binding of mRNA to small ribosomal unit -> initiation
Term
Elongation stage of translation
Definition
-tRNAs bring aa to A site
-series of peptidyl transferase rxn
-->polypeptide formation
-polypeptide is transferred from P site to A site
-tRNAs released from E site
--involves EFs (elongation factors)
Term
start codon selection in complex euk
Definition
follows Kozak's rules
Term
Termination stage of translation:
Definition
-release factor (RF) binds to stop codon in A site
-promotes cleavage of polypeptide from tRNA
-->disassembly of the tRNA, mRNA, & ribosomal subunits
Term
________ translation can begin before transcription is completed?
Definition
bacterial translation
Term
one gene-one enzympe hypothesis:
Definition
each structural gene encodes an essential metabolic enzyme
Term
codons do not have more than one function
Definition
true
Term
most impt evidence that genetic code is a triplet code?
Definition
three insertions near each other lead to minor defects in protein structure
Term
serine is polar/nonpolar
Definition
polar
-> more likely to interact with other polar molecules by forming H bonds (Asparagine)
Term
a tRNA must:
Definition
be attached to a particular aa
Term
least likely to lead to incorporation of wrong aa into polypeptide?
Definition
-change in wobble base of codon
-->change in wobble is unlikely to affect identity of aa
Term
portion of tRNA recognized by aminoacyl-tRNA synthetase?
Definition
acceptor stem, bases in stem loop regions, & anticodon region
Term
struc difference between prok and euk ctyosolic ribosomes?
Definition
none:
both type have 2 subunits
euk consis of prot +RNA
euk are smaller than prok
Term
diff in euk and prok transcription?
Definition
Kozak consensus sequence identifies start codon in euk
Term
termination codons differ from other codons because?
Definition
bind to RFs instead of tRNAs
Term
organication of polypeptide into funtion protein is spontaneous procss
Definition
Term
ribozyme activity required for??
Definition
post transcription processing of mRNA
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