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Genetics NU
Midterm 1
47
Biology
Undergraduate 2
04/22/2014

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Term
genes
Definition
the functional unit of inheritance
Term
alleles
Definition
alternative forms of a gene. Example: wildtype,
Term
genotype
Definition
the complement of alleles of an individual
Term
phenotype
Definition
the complement of observable traits of an
individual
Term
genome
Definition
all of an organism hereditary information, typically DNA
(exception: RNA viruses)
Term
Meiosis
Definition
two nuclear divisions take place. Therefore, four cells are produced. Takes place only in diploid cells, and the cells that result (sperm and eggs) are haploid.
• In the females of humans and many plants, three cells of the meiotic tetrad abort.
• Can be summarized:
o Start: two homologs
o Replication: two dyads
o Pairing: tetrad

-genetic recombination occurs during prophase 1 of meiosis during a process called synapsis (the joining of homologous pairs of chromosomes)
-Daughter cells only receive half of the genetic material from the mother cell
Term
Meiosis vs. Mitosis
Definition
Mitosis vs. Meiosis
• Interphase:
o Chromosome replication takes place to from sister chromatids in both mitosis and meiosis
• Anaphase:
o Centromere division occurs in mitosis in anaphase
o Centromere division doesn’t occur in meiosis until anaphase II
Term
crossing over
Definition
the exchange of genetic material between homologous chromosomes that results in recombinant chromosomes. It is one of the final phases of genetic recombination. Occurs during 4 chromatid stage of meiosis.
Term
synapsis
Definition
the joining of homologous pairs of chromatids. Occurs during prophase 1 of meiosis. Start of genetic recombination.
Term
How does meiosis support Mendel's law of equal segregation?
Definition
• Start: one homolog carries A and one carries a
• Replication: one dyad is AA and one is aa
• Pairing: tetrad is A/A/a/a
• First division products: one cell AA, the other cell aa (crossing over can mix these types of products up, but the overall ratio is not changed
• Second division products: four cells, two of type A and two of type
Term
Mendel's first law of inheritance (law of equal segregation)
Definition
every individual possesses two alleles for any particular gene. In each generation each parent passes one randomly selected allele to its offspring.
Term
chromosome map
Definition
diagrammatic representation of the arrangement of genes on chromosomes. This shows gene positions (loci) and the distances between the loci based on some kind of scale.
Term
chiasma
Definition
when duplicated homologous chromosomes pair with each other (when two dyads unite as a bivalent), a cross-shaped structure called a chiasma often forms between two non-sister chromatids. Indicate that chromatids, not unduplicated chromosomes, participate in this crossover.
Term
dihybrid test cross results
Definition
two equally frequent nonrecombinant classes totaling in excess of 50%, and two equally frequent recombinant classes totaling less than 50%. (9:3:3:1)
• *When two genes are close together on the same chromosome pair (that is, they are linked), they do not assort independently but produce a recombinant frequency of less than 50%.
Term
linked genes
Definition
the loci of those genes are on the same chromosome, and hence, the alleles on any one homolog are physically joined (linked) by the DNA between them.
Term
Recombinant frequency (RF)
Definition
can be used to infer the distance between genes and their order on a linear map (‘genetic map’)
• RF= #of all RECOMBINANT progeny (Ab + aB) / Totally # of progeny
• RF also defines map distance
• Map distances are (generally) additive
• RF of (.01) is 1% centiMorgan or map unit
Term
Single nucleotide polymorphism
Definition
o Most used polymorphism in linkage studies
o Only one nucleotide is different from genome to genome
Term
haplotype
Definition
a combination of alleles at adjacent locations (loci) on a chromosome that are inherited together
o For SNPS a haplotype is a set of SNPs that are close together and usually inherited together
o The idea is to find a haplotype that is strongly linked with the disease
Term
null mutation
Definition
produces a non-functional protein
Term
dominant negative
Definition
Polypeptides with this kind of mutation act as “spoilers.” In the heterozygote (+/M), the spoiler polypeptide binds to the wild-type polypeptide and distorts it or otherwise interferes with its function.
Term
incomplete dominance
Definition
the general case in which the phenotype of a heterozygote is intermediate between those of the two homozygotes. At the molecular level, each wild-type allele generally produce a set dose of its protein product. The number of does of a wild-type allele determines the concentration of a chemical made by the protein, such as a pigment.
Term
codominance
Definition
the expression of both alleles of a heterozygote. Example: different blood types (A and B are both dominant alleles, and when combined produce blood type AB. O is recessive).
Term
lethal allele
Definition
an allele that is capable of causing the death of an organism
• To see if a gene is essential, a null allele is tested for lethality
Term
Temperature sensitive (ts) mutations
Definition
their phenotype is wild type at the permissive temperature (often room temp) but mutant at some higher restrictive temperature.
Term
pleiotropic
Definition
any allele that affects several properties of an organism
Term
One-gene—one-polypeptide hypothesis
Definition
All proteins are encoded by genes.
Term
complementation
Definition
the production of a wild-type phenotype when two haploid genomes bearing different recessive mutations are united in the same cell. This means the mutations are on different genes.
• When two independently derived recessive mutant alleles producing similar recessive phenotypes fail to complement, they must be alleles of the same gene.
Term
complementation test
Definition
In a diploid, this test is performed by intercrossing two individuals that are homozygous for different recessive mutations. The next step is to observe whether the progeny have the wild-type phenotype. If the progeny are wild type, the two recessive mutations must be in different genes because the respective wild0type alleles provide wild-type function. In this case, the two mutations are said to have complemented.
• If the progeny are not wild type, then the recessive mutations must be alleles of the same gene. Because both alleles of the gene are mutants, there is not a wild-type allele to help distinguish between two different mutant alleles of a gene.
Term
heterokaryon
Definition
a way to test complementation in a haploid organism. When two different strains fuse, the haploid nuclei from the different strains occupy one cell, which is the heterokaryon.
Term
epistasis
Definition
the situation in which a double mutant shows the phenotype of one mutation but not the other. The overriding mutation is epistatic, and the overridden one is hypostatic.
Term
bacterial DNA
Definition
o Genome of most bacteria is a single molecule of double stranded DNA in the form of a closed circle. Bacteria in nature often contain extra DNA elements called plasmids. Most plasmids are also DNA circles but are much smaller than the main bacterial genome.
o Can be parasitized by viruses called bacteriophages
o Hereditary processes:
• In asexual cell division, the DNA is replicated but the partitioning of the new copies into daughter cells is accomplished by a mechanism quite different from mitosis.
Term
conjugation
Definition
the contact and fusion of two different cells. A process of gene exchange in bacteria.
Term
transformation
Definition
a bacterial cell can take up a piece of DNA from the external environment and incorporate this DNA into its own chromosome.
Term
transduction
Definition
when a bacteriophage picks up a piece of DNA from one bacterial cell and injects it into another
Term
auxotrophic mutants
Definition
cells that will not grow unless the medium contains one or more specific cellular building blocks.
Term
9:3:3:1 ratio
Definition
no gene interaction. In analyzing double mutants, this is the null hypothesis: the two mutations are on different chromosomes. This ratio is produced because the two genes act independently at the cellular level.
Term
9:7 ratio
Definition
genes in the same pathway. Modification of the dihybrid 9:3:3:1 ratio as it combines the 3:3:1. Only possible if the double mutant has the same phenotype as the two single mutants. The identical pheontypes of the single and double mutants suggest that each mutant allele controls a different step in the same pathway. (E.g. a plant will have white petals if it is homozygous for the recessive mutant allele of either gene or both genes).
Term
9:3:4 ratio
Definition
suggests a type of gene interaction called epistasis. This results from genes being in the same pathway. In a simple synthetic pathway, the epistatic (overriding) mutation is carried by a gene that is farther upstream than the gene of the hypostatic (overridden) mutation. The mutant phenotype of the upstream gene takes precedence, no matter what is taking place later in the pathway. The double mutant is a member of the “4” part of the ratio, because it expresses only one of the two mutant phenotypes, and one gene must be epistatic to the other.
Term
diploids
Definition
for every locus there is one allele on each chromosome, -- paternal, maternal)
-“In each generation each parent passes one randomly
selected allele to its offspring”
-(through meiosis each gamete ends up with just one
allele, when egg and sperm fuse a new complement of 2
will be formed)
Term
chromosome
Definition
the physical carrier of genetic information, a single piece of coiled DNA containing many genes, regulatory elements and other nucleotide sequences
Term
chromatin/euchromatin/heterochromatin
Definition
chromatin: complex of DNA/histones
euchromatin: corresponds to loosely packed and "active" DNA.
heterochromatin: more densely packed inactive and/or repressed DNA
Term
nucleosome
Definition
basic unit of DNA packaging (~147bp of DNA, spooled twice around a histon octamer, containing 2 of each histone H2A, H2B, H3, and H4).
Term
aneuploidies
Definition
an individual is missing either a chromosome from a pair (monosomy) or has more than two chromosomes of a pair (trisomy, polysomy)
-caused by nondisjunctions during meiosis
Term
Examples of alterations in the structure of chromosomes
Definition
Deletions: a piece of the chromosome is missing (deleted)

o Duplications: a piece of the chromosome is duplicated

o Inversions: a piece is inverted - (aBCDe becomes aDCBe)
Term
mutations in X-linked genes
Definition
(genes located on the X) are always DOMINANT in the male, even if recessive in females
Term
x-linked inheritance
Definition
Trait is more common in males: females get the trait ONLY if they inherit it from BOTH parents (pure recessive)

• All progeny of affected males is normal, but ALL female
progeny will be carriers

• No male-to-male transmission (male progeny always only
gets Y from dad, never X)
Term
Y-linked inheritance
Definition
Trait is only present in males, and is transmitted from dad to son as dominant

• Very rare
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