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Genetic Rearrangement
Genetic Rearrangement by Dr. Igeitseme
45
Medical
Professional
09/03/2011

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Term
What is a gamma globulin plasma protein that is made of 4 polypeptide chains, 2 which are light and the other 2 are heavy. the structure is glycosylated.
Definition
Immunoglobin
Term
AN immunoglobulin that binds a specific antigen
Definition
antibody
Term
A substance that can be bound by an antibody
Definition
Antigen
Term
A substance that induces an immune response
Definition
immunogen
Term
True/False All immunogens are antigenic but not all antigens are immunogenic
Definition
True
Term
Name the general properties of an antibody.
Definition
1. Made of multiple polypeptide chains
2. THe gene encoding the polypeptide is created by rearrangement, then transcribed and translated
3. there is diversity in binding specificity.
4. FUnctions in host defense, allergic reactions, and certain immune-mediated diseases
Term
What are the basic steps of Ig Gene expression?
Definition
1. Gene segments are found on different parts of a chromosome
2. Selection and rearrangement/ assembly of gene segments.
3. a Rearrangend functional gene or transcription unit is formed
4. transcription
5. RNA processing
6. Translation
Term
the structures of an Ig are maintained by what?
Definition
disulfide bonds and noncovalent forces
Term
how are L chains designated?
Definition
K (Kappa) or L(greek lambda)(lambda)

Never both only one or the other
Term
The fab fragment is responsible for
Definition
Ag-binding
Term
The Fc fragment is responsible for..
Definition
Its the crystallizable fragment that binds to immune effector cells.
Term
What enzyme has the ability to cleave Ig
Definition
papain and pepsin
Term
THe part of the variable region that has the amino terminal domain of L and H and has the binding site for Ag.
Definition
Variable region
Term
What are the sites that come in contact with the Ag
Definition
Hypervariable region AKA complentarity determining region
Term
What are the Ig classes and subclasses based on?
Definition
Based on the type of H chain (AAs in the C domain)
Term
Name the 5 major classes of H chains
Definition
IgG (IgG1-IgG4)

IgA (IgA1 and IgA2)

IgM

IgD

IgE
Term
Which Igs for mulitmers and how
Definition
Pentameric IgM and dimeric IgA

the individual Igs are joined together by disulfide bonds and j chain
Term
THe additional gylcoprotein that is added to secretory IgA that is derived from the receptor of on epithelial cells
Definition
secretory components
Term
The kappa gene cluster encodes
Definition
the kappa light chain
Term
the lambda gene encodes
Definition
the lambda light chain
Term
What are the 2 phases of Ig synthesis and secretion?
Definition
1.    Ig Expression During B cell maturation.
- Antigen-independent phase

2. Ig Expression After B cell activation with an Ag
- Antigen dependent phase
Term
What are the enzymes involved in antigen independent b cell maturation?
Definition
RAG-1 and RAG-2
Term
What antigen independent steps occur during b cell maturation
Definition
this process occurs in the bone marrow. involves selection, recombination assembly, and formation of the functional gene for the L and H chains

This process occurs separately for kappa, lambda, and H chains
transription and translation produce the b cell receptor for an Ag
Term
What does the library for the lambda and kappa chains contain?
Definition
V segments, J segments, and C segments
Term
What does the H chain library include?
Definition
v segments, d segments, j segment, and c segments
Term
What are the steps of light chain rearrangement, assembly, and expression?
Definition
1. Somatic rearrangement brings selected V and J segments together
2. The V-J segment combines with a variable C segment
3. the primary transcript is transcribed, spliced and translated forming the light chain
Term
What are the steps of H gene rearrangement, assembly, amd expression
Definition
1. Somatic rearrangement brings the D and J segments together
2. Somatic rearrangement brings selected V and DJ segments together
3. The VDJ segment combines with a C segment
4. the primary transcript is transcribed, spliced and translated forming the heavy chain
Term
What are the first 2 Tg expressed on the B cell surface?
Definition
IgM and IgD
Term
When does B cell activation occur?
Definition
It occurs when the surface Ig binds it Ag
Term
What is the first Ig secreted?
Definition
IgM
Term
Antibody secreting mature Bcells
Definition
plasma cells
Term
The part of the Ab that changes after binding to an antigen
Definition
the constant region on the H chain
Term
the difference between secreted Igs and membrane bound Igs
Definition
membrane bound Igs have a transmembrane portion
a small extra exon at the 3' end of the last constant domain
this is due to althernative splicing
Term
What is it called when the antibody class switches from IgM (or IgD) to IgG, IgA, or IgE
Definition
class switching AKA isotype switch
involves a second gene rearrangement/recombination event
Term
The spliced out DNA that is produced by a class switch
Definition
switch circle
Term
What other immune molecules share Ig-like domain organization, involved in host defense, and function as coreceptors, cell-cell adhesion, inflammation, co-stimulation, and cell activation
Definition
Ig Superfamily
Term
Examples of molecules that are a part of the Ig gene superfamily
Definition
MHC, CD4
Term
What are the 2 types of t cell receptors
Definition
alpha-beta and gamma-delta
Term
What is required for a t cell to bind to an antigen
Definition
the Ag must be complexed in a MHC complex
Term
What is required for a t cell to bind to an antigen
Definition
the Ag must be complexed in a MHC complex
Term
THe alpha chain on the Tcell receptor is similar to what on the B cell receptor?
Definition
simialr to the heavy chain
Term
The beta chain on the t cell receptor is similar to what on the b cell receptor
Definition
light chain
Term
the variable region of a alpha chain or the light chain is made by
Definition
the VJ segment
Term
THe B chain or the heavy chain variable region is created by
Definition
V-DJ joining
Term
Does somatic mutation contribute to T cell receptor diversity
Definition
No
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