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Final
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155
Microbiology
Undergraduate 2
12/04/2011

Additional Microbiology Flashcards

 


 

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Term
Antoni van Leeuwenhoek
Definition
Known as the father of bacteriology and protozoology
Made his own microscopes
Discovered the microbial world of bacteria and protozoans
Term
Edward Jenner
Definition
Began the field of immunology by vaccination a boy with vaccinia virus which causes cowpox to prevent infection by Variola virus which causes smallpox
Term
Carolus Linnaeus
Definition
Developed the taxonomic system for naming animals and plants and grouping similar organisms together
Term
Louis Pasteur
Definition
Boiled infusions in flasks with S shaped necks
Allowed for air to enter but kept out dust particles
Disproved the theory of spontaneous generation
Developed pasteurization, proved that grape juice ferments with yeast and with bacteria in it makes acid
Term
Florence Nightingale
Definition
Introduced antiseptic practices in nursing
Scrubbed wards and replaced contaminated clothing and dressings
Documented statistics supporting her practices
Term
Joseph Lister
Definition
Developed procedures for antiseptic surgery
Sprayed wounds, surgical incisions, and dressing with carbolic acid (Phenol)
Term
Carolus Linnaeus
Definition
Grouped similar organisms that can successfully interbreed into categories called species
Used binomial nomenclature in his system: First word capital second lower case and words are italicized or underlined
Term
Monomers
Definition
Basic building blocks of macromolecules
Term
Macromolecules
Definition
Lipids, Carbohydrates, Proteins, Nucleic Acids
Term
Lipids
Definition
Long hydrophobic chains of carbon and hydrogen
Term
Building blocks of Proteins
Definition
Mostly compose of carbon, hydrogen, oxygen, nitrogen, and sulfer
Term
Building blocks of Lipids
Definition
Not composed of regular (monomers) subunits, but are all hydrophobic
Four Groups:
Fats/Triglycerides (Glycerol + 3 fatty acids)
Phospholipids (phosphate plus lipid)
Waxes
Term
Building blocks of Carbohydrates
Definition
Organic molecules composed of carbon, hydrogen, and oxygen (CH2O). For all practical purposes, we will consider glucose as the monomer
Term
Building blocks of Nucleic Acids
Definition
DNA and RNA: the genetic material of organisms, RNA helps form proteins
The monomers that make up nucleic acids are called nucleotide
Term
Nucleotide
Definition
Composed of three parts
Phosphate
Pentose sugar
One of five cyclic nitrogenous bases
Adenine (A)
Guanine (G)
Cytosine (C)
Thymine (T)
Uracil (U)
Term
Obligate aerobes
Definition
Presence of oxygen is necessary for survival, oxygen is final electron acceptor for ATP production
Term
Obligate anaerobes
Definition
oxygen is a deadly poison, because of its oxidative properties
Term
Facultative anaerobes
Definition
Organisms whose metabolic efficiency is reduced in anaerobic conditions, but survival is still possible
Term
Biofilms
Definition
Complex relationships between many cells of one species, or many species, in which a cellular matrix made of proteins and polysaccharides fibers make a film providing protection from environmental stresses: pH, temperatures, antibiotics
Term
Glycocalyces
Definition
Gelatinous, sticky substance surrounding the outside of the cell
Term
Purpose of Glycocalyces
Definition
Protects cell from drying out
Allows cell to attach to surfaces, like teeth (tartar)
Called a capsule when firmly attached
Called a slime layer when loosely attached
Usually feature of pathogenic bacteria
Term
Flagella
Definition
Long structures extending beyond the surface of the cell and glycocalyx that propel a cell through its environment, like the tail on a tadpole
Not present on all prokaryotes
Term
Fimbriae
Definition
Sticky, proteinaceous, bristle like projections, shorter than flagella

Help bacteria to adhere to one another or to other substances around them
Aid in formation of biofilms, slimy masses of bacteria growing in a colon, like tartar on teeth
Term
Pilus
Definition
Tubules composed of pilin

Longer than fimbriae
Used like a grappling hook to move across substrate or toward another bacterium
Also known as conjugation pili
Mediate the transfer of DNA from one cell to another
Term
Gram + cell wall
Definition
Thick layer of peptidoglycan containing teichoic acids, which have a negative charge
Stain PURPLE
Term
Gram - cell wall
Definition
Have only a thin layer of peptidoglycan
Have a bilayer membrane outside of the peptidoglycan layer
The outside later is composed of lipopolysaccharide (LPS), which is a lipid combined with a sugar (Lipid A)
Stain PINK
Term
Phospholipid bilayer
Definition
A bipolar, two layered membrane, outside being hydrophilic and inside being hydrophobic
The phospholipid bilayer is said to follow a fluid mosaic model, meaning it is composed of many tiny tile like structures that are free to flow laterally, like floating cheerios in a bowl of milk
Term
Cytosol
Definition
Liquid portion of cytoplasm, much like plasma is the liquid portion of blood
Term
Ribosomes
Definition
Organelles provide site from protein synthesis
Composed of two subunits each of which is made of ribosomal RNA 70S (Sedimentation rate)
Term
Capsule (Glycocalyces)
Definition
Composed of organized repeating units of organic chemicals
Firmly attached to cell surface
Protects cells from drying out
May prevent bacteria from being recognized and destroyed by host
Term
Slime Layer
Definition
Loosely attached to cell surface
Water soluble
Protects cells from drying out
Sticky later that allows prokaryotes to attach to surfaces
Term
Phototaxis
Definition
Movement due to light
Term
Chemotaxis
Definition
Movement due to chaemical
Term
Positive taxis/negative taxis
Definition
Positive is movement toward and Negative is movement away
Term
Lipid A
Definition
Released form the LPS and may trigger fever, vasodilation, inflammation,shock,and blood clotting
Term
Endospores
Definition
Unique structures produced by some bacteria that are a defensive strategy against unfavorable conditions
Term
Ribosomes
Definition
Sites of protein synthesis
Term
Coccus
Definition
Round ball shape
Term
Coccobacillus
Definition
Shorter than rod shaped but not ball shaped in between bacillus and coccus
Term
Bacillus
Definition
Rod shaped
Term
Vibrio
Definition
Curved rod shape
Term
Pleomorphic
Definition
Irregular shaped
Term
Spirochete
Definition
Spiral shape
Term
Diplo-
Definition
Pair, Diplococci
Term
Strepto-
Definition
Long chain, Streptococci
Term
Sarcinae
Definition
Cocci divide in three planes to form cuboidal packets called sarcinae
Cuboidal cluster of 4 or more cocci
Term
Palisade
Definition
A clump of bacilli
Term
Endosymbiotic Theory
Definition
Eukaryotes formed from union of small aerobic prokaryotes with larger anaerobic prodaryotes
Smaller prokaryotes becae internal parasites
Aerobic prokaryotes evolve into mitoghondria
Term
Lynn Margulis
Definition
Popularized the endosymbiotic theory
Term
Nucleus
Definition
"Control center of the cell" contains most of the cells DNA, genetic information
Term
Endospores
Definition
Produced by cells such as Bacillus and Clostridium as a defensive strategy
Term
Viral envelope
Definition
Acquired from host cell during viral replicaiton or release; envelope is portion of membrane system of host
Composed of phospholipid bilayer and proteins; some proteins are virally coded glycoproteins
Envelope's proteins and glycoproteins often play role in host recognition
Term
Clostridi
Definition
Rod shaped, obligate anaerobes, many form endospores, includes C. perfingens (gangrene), C. botulinum (botulism), C tetani (tetanus)
Term
Bacillus
Definition
B. anthracis and B thuringiensis Bt toxin
Low G + C Gram positive bacilli
Term
Low G + C Gram positive bacteria
Definition
The ratio of guanine cytosine base pairs in their DNA is less than 50%
Classified in phylum Firmicutes, which includes Clostridia, Mycoplasmas, Bacilli, and Cocci
Term
High G + C Gram positive bacteria
Definition
The ratio of guanine cytosine base pairs in their DNA is more than 50%
In the phylum Actinobacteria, includes rod shaped and filamentous (which resemble fungi and produce spores) bacteria
Term
Study of Fungi
Definition
Mycology
Term
Diseases caused by fungi
Definition
Mycoses
Term
Virus is Latin for what?
Definition
Poision
Term
Virus characteristics
Definition
Cause many infections of humans, animals, plants, and bacteria
Cannot carryout any metabolic pathway
Neither grow nor respond to the environment
Cannot reproduce independently
Recruit the cell's metabolic pathways to increase their numbers
Term
Virus
Definition
Miniscule, acellular, infectious agent having one or several pieces of either DNA or RNA
No cytoplasmic membrane, cytosol, organelles
Have extracellular and intracellular state
Term
Extracellular state virus
Definition
Called virion
Protein coat (capsid) surrounding nucleic acid
Nucleic acid and capsid also called nucleocapsid
Some have phospholipid envelope
Outermost layer provides protection and recognition sites for host cells
Term
Intracellular state virus
Definition
Capsid removed
Virus exists as nucleic acid
Term
How viruses are distinguished
Definition
Type of genetic material they contain (DNA or RNA)
Kinds of cells they attack (liver, skin)
Size of virus
Nature of capsid coat
Shape of virus
Presence or absence of envelope
Term
Lysogenic conversion
Definition
Can pass genes to bacteria
Term
Induction
Definition
Excision of prophage to enter the lytic cycle
Term
Sterilization
Definition
Destruction of all microorganisms and viruses in or on an object
Term
Aseptic
Definition
Refers to an environment or procedure free of pathogenic contaminants
Term
Disinfection
Definition
Destruction of most microorganisms and viruses on nonliving tissue
Term
Antisepsis
Definition
Reduction in the number of microorganisms and viruses, particularly potential pathogens, on living tissue
Term
Degerm
Definition
Removal of microbes by mechanical means
Term
Sanitization
Definition
Removal of pathogens from objects to meet public health standards
Term
Pasteurization
Definition
Use of heat to destroy pathogens and reduce the number of spoilage microorganisms in foods and beverages
Term
Phenol Coefficient
Definition
Evaluating the efficacy of disinfectants and antiseptics by determining an agent's ability to control microbes as a ratio to that of phenol
Greater than 1.0 indicates that agent is more effective than phenol
Has been replaced by newer methods
Term
What microbes grow in refrigeration
Definition
Psychrophilic
Term
Phenol and Phenolics
Definition
Intermediate to low level disinfectants
Denature proteins and disrupt cell membranes
Effective in presence of organic matter and remain active for prolonged time
Commonly used in health care settings, labs, and homes (lysol, triclosan)
Term
Iodophor
Definition
A compound with slow releasing iodine capabilities, such as betadine, which is used to clean skin before injection or surgery
Term
Beta-lactams
Definition
Most prominent group in the group with inhibition of cell wall synthesis
They bind to enzymes that cross link NAM subunits
Term
Broad Spectrum drug
Definition
Effective against many kinds of pathogens, like tetracycline which acts against G+, G-, rickettsiae and chlamydiae
Term
Mutualism
Definition
Both members benefit
Ex: protozoa digest cellulose inside of termites
Term
Commensalism
Definition
One benefits without hurting the other
Ex: Staphylococcus epidermidis lives on our skin
Term
Parasitism
Definition
One benefits and hurts the other
Ex: Plasmodium infects our blood and cause malaria
Term
Normal Microbiota (flora)
Definition
Microbes that normally colonize parts of the body without causing disease
Term
Normal microbiota of skin
Definition
Corynebacterium, Micrococcus, Propionibacterium, Staphylococcus, Candida, Malassezia
Term
Antitoxins
Definition
Antibodies against toxins
Term
Acute
Definition
Develops rapidly but lasts a short while
Term
Chronic
Definition
Develops slowly, but lasts continually or recurrently, like Hepatitis C
Term
Latent
Definition
Pathogen remain inactive for a long period of time, like herpes simplex
Term
Endemic
Definition
Diseases that occur continually in a population at a relatively stable incidence
Term
Sporadic
Definition
Only a few scattered cases in an area or population
Ex: human cases of rabies
Term
Epidemic
Definition
An unusually high incidence rate of a disease for an area or population
Ex: food poisoning in a town population
Term
Pandemic
Definition
An epidemic occurring on several continents, worldwide
Term
Nosocomial infection
Definition
Acquired by patients while in health care facilities
Term
Fomite
Definition
An inanimate object that is capable of carrying infectious organisms hence transferring them from one individual to another
Term
Body's first line of defense
Definition
Includes the skin and mucous membranes
Term
Microbial Antagonism
Definition
The normal flora can change pH and compete for nutrients against possible pathogenic organisms
Term
Body's second line of defense
Definition
Defense components of the blood
Innate Immunity
Term
Phagocytosis, The five steps
Definition
Chemotaxis
Adherence
Ingestion
Killing
Elimination
Term
Chemotaxis
Definition
Involves the use of pseudopodia to crawl towards pathogens
Term
Adherence
Definition
Phagocytes attach to pathogens by binding to glycoproteins found on the outside of organisms
Term
Ingestion
Definition
After adherence the pseudopodia envelop the organism and internalize it as a vesicle, called a phagosome
Term
Killing
Definition
Lysosomes fuse with the phagosome forming a phagolysosome which then digests it
Term
Elimination
Definition
The remnants are exocytosed, or expelled
Term
Opsonization
Definition
The coating of organisms with complement proteins for easier phagocytosis (part of Adherence step of Phagocytosis)
Term
Third line of defense
Definition
Adaptive Immunity
Term
Semi-Synthetics (antibiotics)
Definition
Chemically altered antibiotics that are more effective than naturally occurring ones
Semi-synthetic derivatives of beta-lactams inhibit cell wall synthesis
Term
Penicillin
Definition
Beta-lactam
Effective only against Gram + bacteria
Not strong enough to penetrate the LPS layer of Gram - bacteria so ineffective against Gram -
Term
Granulocytes
Definition
Basophils
Eosinophils
Neutrophils
Term
Neutrophils and eosinophils
Definition
Phagocytize pathogens
Neutrophils attack bacteria
Eosinophils attack parasites
Term
Basophils
Definition
Release inflammatory signals
Term
Diapedesis
Definition
Squeezing between the cells of capillaries to attack cells in the tissues
Neutrophils, basophils, and eosinophils are all capable of diapedesis
Term
Agranulocytes
Definition
Lymphocytes
Monocytes
Term
Lymphocytes
Definition
Most involved in adaptive immunity
Term
Monocytes
Definition
Leave the blood and mature into macrophages, they are phagocytic
Term
Macrophages
Definition
Phagocytic cells of the second line of defense
Wandering macrophages leave the blood via diapedesis and phagocytize throughout the body
Fixed macrophages do not move throughout the body and often phagocytize within a specific organ
Include alveolar macrophages (lungs), Microglia (CNS), Kupffer cells (liver)
All macrophages, plus monoctes attached to endothelial cells, constitute the mononuclear phagocytic system
Term
Neutrophils
Definition
Produce chemicals similar to hydrogen peroxide or bleach that kill nearby invaders
Generate extracellular fibers that bind to and kill bacteria
Term
Interferons
Definition
Protein molecules released by host cells to nonspecifically inhibit the spread of viral infections
Cause many symptoms typically associated with viral infections
Interferon alpha and beta are present early in the infection and gamma appears later in the course of infection
Term
Complement
Definition
Set of serum roteins designated numerically according to the order of their discovery
Complement activation results in lysis of the foreign cells
The two most important pathways are classical and alternate
Term
Classical pathway
Definition
Complement enzymes cleave other complement proteins in a cascading effect
Complement activation leads to increase in vascular permeability, inflammation, and opsonization
The end product is a membrane attack complex (MAC)
Term
MAC (membrane attack complex)
Definition
A giant perforation in the cell membrane causing leaking and lysis
Term
Alternate pathway
Definition
Activation occurs independent of antibodies
Useful in early stages of infection before antibodies have been made
Initiated by the cleavage of C3 into C3a and C3b which occurs naturally at a slow rate in the plasma
Term
Chronic inflammation
Definition
Develops slowly and lasts a long time
Can cause damage to tissues
Term
Acute inflammation
Definition
Develops quickly and is short lived
Is usually beneficial
Important in the second line of defense
-Dilation and increased permeability of the blood vessels
-Migration of phagocytes
-Tissue repair
Term
Prostaglandins and Leukotrienes
Definition
Released by macrophages and cause vasodilation delivering phagocytes, nutrients and oxygen from the blood to the site of the infection in the tissue
Term
Mast cells
Definition
Release histamines, in response to complement, causing vasodilation and resulting in edema
Term
Pyrogens
Definition
Various types of pyrogens signal for the production of IL-1 by phagocytes
Increased temperature is triggered b pyrogens, chemicals like bacterial toxins released during cell death
Term
IL-1 (Interleukin-1)
Definition
is a pyrogen released by phagocytes that have phagocytized bacteria
These cytokines bind to endotheilial receptors of circumventricular organs within the hypothalamus and activate the arachidonic acid pathway
Term
Two main types of lymphocytes
Definition
B lymphocytes (B cells)
T Lymphocytes (T cells)
Term
Antigens
Definition
Are molecules that rigger a specific immune response
Antigens are not whole bacteria, just small parts Ex. cell walls, flagella, viral proteins
Term
Lymphocytes
Definition
The smallest leukocytes (white blood cells) and have large nuclei
Circulate throughout the body in blood and lymph
Term
B lymphocytes
Definition
Form and mature in the bone marrow
Humoral Immunity
Have surface antibodies and are found primarily in the spleen, nodes, and MALT
Called plasma cells when actively fighting exogenous antigens
Term
T lymphocytes
Definition
Form in the bone marrow but mature in the Thymys
Cell mediated Immunity
Term
Exogenous antigens
Definition
Outside of cell, include toxins, secretions, components of cell walls, membranes, flagella, and pili
Term
Endogenous antigens
Definition
Inside of cells, include fungi, protozoa, bacteria, and viruses that reproduce inside the body's cells
Term
Autoantigens
Definition
Self antigens, found on the body's normal cell's
Term
Immunoglobulin
Definition
IgG, IgA, IgM, IgE, IgD
Five different classes
IgG is the most abundant
Term
T Lymphocytes (T cells)
Definition
Act against endogenous invaders
Ex: Viral, bacterial, fungal infected cells, and cancer cells
Make up 70-85% of lymphocytes in blood and lymph
Term
Cytotoxic T cells
Definition
Directly kills other cells
Term
Helper T lymphocyte
Definition
Functions to "help" regulate the activities of B cells and cytotoxic T cells
Term
Th1 (T helper cell)
Definition
Help cytotoxic T cells
Term
Th2
Definition
Help B cells
Term
Antibodies
Definition
Secreted immunoglobulins (By plasma cells)
Free immunoglobulins and similar to BCR's (B cell receptors) in shape, though antibodies are secreted and lack the bulk of the transmembrane portions of BCR.
Term
Clonal deletion
Definition
The body eliminates self-reactive lymphocytes via clonal deletion, so named because elimination of a cell deletes its potential offspring (clones). In this process, lymphocytes are exposed to autoantigens, and those lymphocytes that react to autoantigens undergo apoptosis (programmed cell suicide) and are thereby deleted from the repertoire of lymphocytes.
Term
Which antibody is found in secretions?
Definition
A
Term
Septicemia
Definition
Presence of any microbial infection of the blood that produces illness
Term
Bacteremia
Definition
Bacterial septicemia that is often harmless
Term
Toxemia
Definition
Release of bacterial toxins into the blood
Term
Lymphangitis
Definition
Infection and inflammation of the lymphatic vessels
Term
Petechiae
Definition
Small hemorrhagic lesions just under the skin
Term
Exotoxins
Definition
Toxin released from living microorganisms during toxemia
Term
Endotoxins
Definition
Toxins released from Gram - bacteria during toxemia
Term
DIC (Disseminated intravascular disease)
Definition
Widespread and severe coagulation
Can be fatal
Term
Debridement
Definition
Where health care workers remove the "crust" from a wound so that antimicrobial drugs can be effective
Term
Pyocyanin
Definition
A blue-green pigment that is produced by the bacteria Pseudomonas aeruginosa when it invades the bloodstream and the blue-green pigment is secreted in the wound (usually in burn victims)
Term
Enterotoxins
Definition
They bind to surface proteins on epithelial cells lining the intestines, triggering the loss of electrolytes and water in a manner similar to cholera toxin
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