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Enzymes
Enzyme Review
37
Biochemistry
Undergraduate 4
10/14/2014

Additional Biochemistry Flashcards

 


 

Cards

Term

 

Define: Enzyme

Definition
-Globular proteins that act as a biological catalyst
Term
Enzymes exhibit catalytic effect on substances known as...
Definition

 

Substrates

Term
What is a cofactor?
Definition

Metallic elements that help activate enzyme

Ex: Iron and Zinc

Term
What is a coenzyme?
Definition

vitamin-derived molecules who participate directly in the reaction 

 

ex. NAD and FAD

Term
What are prosthetic groups?
Definition

A tightly bound non-protein portion of the enzyme 

 

ex. Heme

Term

 

What is an Isoenzyme?

Definition

Enzymes that differe in amino acid sequence but catalyze similar physiological reactions

 

(frequently found within the body and measures in the lab)

Term
What is an Isoform?
Definition
basically subclasses of isoenzymes...very similar and differ by usually 1 amino acid
Term
Factors that affect the enzyme during an enzymatic reaction:
Definition
Temperature and pH
Term
Factors that affect the rate of enzyme-substrate binding
Definition
  • Concentration of enzyme
  • Concentration of substrate
  • Substrate specificity 
  • Time 
  • Inhibitors
Term
What is a competitive inhibitor?
Definition

Inhibitor binds to the active site of the enzyme, preventng the binding of the substrate. 


(inhibitor and substrate cannot bind to the enzyme at the same time)

Term
What is a non-competetive inhibitor?
Definition
inhibitor binds to the enzyme; reducing its activity with the substrate but does not affect the binding of the substrate
Term
What is an uncompetitive enzyme?
Definition
binds to the enzyme-substrate complex
Term
What does an irreversible inhibitor do?
Definition
covalently modifies an enzyme
Term
What is an activator?
Definition

activators bind to enzymes and allow them to function appropriately

 

(Some enzyme active sites are not configured appropriately and need to have their shape rearranged to allow for E-S complex formation)

Term
What is the reaction catalyzed by Oxidoreductases?
Definition
Transfer of hydrogen and oxygen atoms or electrons from one substrate to another
Term
What are some examples of oxidoreductases?
Definition
  • Dehydrogenases
    • Lactate Dehydrogenase
    • Glucose-6-Phosphate Dehydrogenase
  • Oxidases

 

Term
What reaction is catalyzed by the Transferases?
Definition
Transfer of a specific group (phosphate, methyl etc..) from one substrate to another
Term
What are some examples of Transferases?
Definition
  • Transaminase
    • AST, ALT, GGTP
  • Kinases
    • CK, PK
Term
What is the reaction catalyzed by hydrolases?
Definition
Hydrolysis of a substrate
Term
What are some examples of hydrolases?
Definition
  • Estrases
  • Digestive Enzymes
  • ALP
  • ACP
Term
What reaction is catalyzed by isomerases?
Definition
Change of the moleculer form of the substrate
Term
What reaction is catalyzed by Lyases?
Definition
nonhydrolytic removal of a group or addition of a group to a substrate
Term
What are some examples of lyases?
Definition

Decarboxylases

Aldolases

Term
What is the reaction catalyzed by ligases?
Definition
Joining of two molecules by the formation of new bonds
Term
In first order kinetics, the velocity of product formation is based up:
Definition
Enzyme concentration and substrate concentration
Term
In zero order kinetics, velocity of product formation is based upon:
Definition

Enzyme concentration only 

NOT substrate

Term
The michaelis-menton equation determines velocity of reaction based on...
Definition
substrate concentration, Vmax, and affinity of substrate to enzyme
Term
What affect does a competitive inhibitor have on an enzyme reaction?
Definition

Km: increases

Vmax: remains unchanged

Term
What affect does a noncompetitive inhibitor have on a reaction?
Definition

Km: remains unchanged

Vmax: is decreased

Term
What affect does a uncompetitive inhibitor have on a reaction?
Definition

Km: decreased

Vmax: decreased

Term
What type of inhibitor is present? [image]
Definition
Competitive Inhibitor
Term
What type of inhibitor is present? [image]
Definition
Noncompetetive inhibitor
Term
What type of inhibitor is present? [image]
Definition
uncompetitive inhibitor
Term
When the temperature of a reaction is too low it will cause a falsely ______ result
Definition
LOWERED
Term
What are the 4 ways to determine concentration of an enzyme?
Definition
  1. Look for an increase in concentration of product 
  2. Look for the change in concentration of a coenzyme (NADH->NAD+)
  3. Look for decrease in substance concentration
  4. Coupled reactions
Term
What is an endpoint assay?
Definition

allows the reaction to move forward and only measure at one time point

 

 

(Does not account for inhibitors that can prolong lag phase or activators that can speed up substrate depletion)

Term
What is a kinetic assay
Definition

"continuous monitoring"

check absorbance at varying intervals

 

(Checks for inhibitors, more math involved though)

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