Shared Flashcard Set

Details

DNA replication and repair
Tufts D17 Exam IV
23
Biochemistry
Professional
11/26/2013

Additional Biochemistry Flashcards

 


 

Cards

Term
What bond forms between growing nucleotide chain and the new nucleotie
Definition
phosphodiester bond
Term
Which direction does the DNA strand grow?
Definition
5' to 3'. A base is always added at the 3' end.
Term
What enzyme destroys the hydrogen bonds that bring base pairs together?
Definition
helicases. DNA is synthesized in two directions
Term
Dna polymerase can't add a new nucleotide to just one nucleotide base paired to DNA. What is the solution?
Definition
An RNA polymerase can add ribonucleotide to a single strand of DNA without a primer. RNA must be there first before DNA synthesis can begin.
Term
exonuclease vs endonucleases?
Definition
exonucleases cut DNA from the end.endonucleases do it from inside the DNA. exonucleases come in 5' and 3' cutting types.
Term
What olé to exonucleases play in DNA replication?
Definition
They proof read the DNA adclave away mismatched duplexes on the end.
Term
How does DNA synthesize the 3'-5'strand?
Definition
Okazaki fragments on the lagging strand.
Term
What happens when the lagging strand polymerase meets the RNA primer?
Definition
The RNA's Uracil and oxy form tell the DNA polymerase that it needs to be cleaved away. RNA-DNA strands forms a different helix than DNA-DNA strands.
Term
Which enzyme closes Okazaki fragments?
Definition
DNA ligase
Term
Which enzyme changes the topology of DNA and works to get the special orientation of the DNA correct?
Definition
topoisomerase
Term
Which enzyme does the end of DNA
Definition
Telomerase and it ha its own RNA primer
Term
What is reverse transcriptase?
Definition
When RNA is used to make DNA. HIV uses this
Term
What happens if you don't have telomerase?
Definition
The DNA gets shorter. When DNA gets to a certain length it stops dividing.
Term
What cells have telomerase
Definition
stem cells. Cancer cells.
Term
What is the result of deamination
Definition
Cytokine turns into Uracil. Adenine turns into hypoxanthine
Term
What does hypoxanthine do to DNA pairing?
Definition
It acts like a guanine
Term
What is a thymine dimer
Definition
Ultraviolet light causes thymine to mutate. Causes skin cancer. Enzymes recognize the thymine dimer and repairs the dimer.
Term
How do enzymes recognize the incorrect base pair?
Definition
The mismatched base pair causes the wrong pair to oscillate between association and distortion that the enzyme detects.
Term
What does p53 do?
Definition
p53 is a protein that recognizes damaged DNA. When p53 is raised to a certain level p53 initiates apoptosis.
Term
What if p53 is not functioning
Definition
Inefficient DNA repair, and the risk of cancer goes way up because mutation become much more likely.
Term
Is p53 a oncogene or a tumor suppressor gene?
Definition
Tumor suppressor because it stops cancer when active. Ras is oncogene because it promotes cancer.
Term
SMAD question
Definition
Ismad
Term
This lecture secret question
Definition
P-53.
Supporting users have an ad free experience!