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Chapter 9
Translation
12
Biology
Undergraduate 2
11/11/2013

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Term
tRNA
Definition
specific; bring amino acids to ribosome
Term
charged tRNA
Definition
has an amino acid connected to it
Term
anticodon
Definition
complementary to the codon for amino acid carried by tRNA
(3' to 5' direction)
Term

aminoacyl-tRNA synthetase

Definition
-1 per amino acid
-link amino acid to the tRNA
Term

wobble


Definition
loose pairing -> tRNA's recognize and bind to several alternative codons (not just 1 with complementary sequence)
-several codons can pair with more than one anticodon
Term
sites of protein synthesis
Definition
A site: binds incoming aminoacyl-tRNA
P site: tRNA binds - growing peptide chain
E site: contains deacytelated tRNA that is ready to be released from the ribosome
Term
Ribsome
Definition
translate the sequence of nucleotide codons in mRNA into the sequence of amino acids in protein
small & large subunit
small: binding site for mRNA
large: where peptide chain grows through
composed of rRNA
Term

initiator tRNA


Definition
binds directly to the P site with the help of initiation factors -> initiates translation
eukaryotes: AUG initiation codon
Term

peptidyl transferase center

Definition
where peptide-bond formation is catalyzed (composed of rRNA) - the large ribosomal subunit functions as a ribozyme to catalyze peptide-bond formation
Term

Shine-Dalgarno sequence

Definition
pairs rRNA (small subunit) to mRNA and correctly positions initiator codon in the P site where initiator tRNA will bind
Term
initiation factors
Definition
remove regions of secondary structure so the aUg initiator codon is exposed
Term
nonsense suppressor
Definition
tRNA mutation that suppresses the protein truncation - anticodon is mutated to recognize the stop codon so that when the ribosome reaches the stop codon, the nonsense mutation will sometimes bind and incorporate its amino acid (instead of the regular release factor binding and causing termination), allowing translation to continue
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